Protein–RNA interactions for Protein: A0A0J9YTW6

Scn2a, Sodium channel protein, mousemouse

Predictions only

Length 2,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2aA0A0J9YTW6 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Scn2aA0A0J9YTW6 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.83■□□□□ 0.12
Scn2aA0A0J9YTW6 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scn2aA0A0J9YTW6 Gm18959-201ENSMUST00000208954 655 ntBASIC15.83■□□□□ 0.12
Scn2aA0A0J9YTW6 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Scn2aA0A0J9YTW6 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.83■□□□□ 0.12
Scn2aA0A0J9YTW6 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Scn2aA0A0J9YTW6 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Scn2aA0A0J9YTW6 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scn2aA0A0J9YTW6 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scn2aA0A0J9YTW6 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Scn2aA0A0J9YTW6 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Scn2aA0A0J9YTW6 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2aA0A0J9YTW6 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2aA0A0J9YTW6 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2aA0A0J9YTW6 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2aA0A0J9YTW6 Gm24841-201ENSMUST00000158676 357 ntBASIC15.82■□□□□ 0.12
Scn2aA0A0J9YTW6 Gm4217-201ENSMUST00000182243 1002 ntBASIC15.82■□□□□ 0.12
Scn2aA0A0J9YTW6 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.82■□□□□ 0.12
Scn2aA0A0J9YTW6 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC15.82■□□□□ 0.12
Scn2aA0A0J9YTW6 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2aA0A0J9YTW6 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2aA0A0J9YTW6 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2aA0A0J9YTW6 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2aA0A0J9YTW6 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2aA0A0J9YTW6 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2aA0A0J9YTW6 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Scn2aA0A0J9YTW6 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2aA0A0J9YTW6 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2aA0A0J9YTW6 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2aA0A0J9YTW6 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2aA0A0J9YTW6 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2aA0A0J9YTW6 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2aA0A0J9YTW6 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2aA0A0J9YTW6 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2aA0A0J9YTW6 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2aA0A0J9YTW6 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.82■□□□□ 0.12
Scn2aA0A0J9YTW6 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2aA0A0J9YTW6 Gm17661-201ENSMUST00000170317 270 ntBASIC15.82■□□□□ 0.12
Scn2aA0A0J9YTW6 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.82■□□□□ 0.12
Scn2aA0A0J9YTW6 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Scn2aA0A0J9YTW6 Gm43294-201ENSMUST00000202850 2490 ntBASIC15.82■□□□□ 0.12
Scn2aA0A0J9YTW6 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC15.82■□□□□ 0.12
Scn2aA0A0J9YTW6 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn2aA0A0J9YTW6 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn2aA0A0J9YTW6 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Scn2aA0A0J9YTW6 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.81■□□□□ 0.12
Scn2aA0A0J9YTW6 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Scn2aA0A0J9YTW6 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Scn2aA0A0J9YTW6 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn2aA0A0J9YTW6 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.81■□□□□ 0.12
Scn2aA0A0J9YTW6 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.81■□□□□ 0.12
Scn2aA0A0J9YTW6 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Scn2aA0A0J9YTW6 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Scn2aA0A0J9YTW6 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn2aA0A0J9YTW6 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Scn2aA0A0J9YTW6 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn2aA0A0J9YTW6 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn2aA0A0J9YTW6 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn2aA0A0J9YTW6 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Scn2aA0A0J9YTW6 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Scn2aA0A0J9YTW6 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Scn2aA0A0J9YTW6 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn2aA0A0J9YTW6 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn2aA0A0J9YTW6 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn2aA0A0J9YTW6 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn2aA0A0J9YTW6 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Scn2aA0A0J9YTW6 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Scn2aA0A0J9YTW6 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn2aA0A0J9YTW6 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn2aA0A0J9YTW6 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.8■□□□□ 0.12
Scn2aA0A0J9YTW6 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Scn2aA0A0J9YTW6 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn2aA0A0J9YTW6 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn2aA0A0J9YTW6 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn2aA0A0J9YTW6 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Scn2aA0A0J9YTW6 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Scn2aA0A0J9YTW6 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn2aA0A0J9YTW6 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn2aA0A0J9YTW6 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn2aA0A0J9YTW6 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn2aA0A0J9YTW6 Gm10231-201ENSMUST00000181584 441 ntBASIC15.8■□□□□ 0.12
Scn2aA0A0J9YTW6 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn2aA0A0J9YTW6 Gm9694-201ENSMUST00000193347 1189 ntBASIC15.8■□□□□ 0.12
Scn2aA0A0J9YTW6 Gm10175-202ENSMUST00000208752 441 ntBASIC15.8■□□□□ 0.12
Scn2aA0A0J9YTW6 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn2aA0A0J9YTW6 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn2aA0A0J9YTW6 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn2aA0A0J9YTW6 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.8■□□□□ 0.12
Scn2aA0A0J9YTW6 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn2aA0A0J9YTW6 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn2aA0A0J9YTW6 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn2aA0A0J9YTW6 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn2aA0A0J9YTW6 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Scn2aA0A0J9YTW6 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC15.79■□□□□ 0.12
Scn2aA0A0J9YTW6 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Scn2aA0A0J9YTW6 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn2aA0A0J9YTW6 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC15.79■□□□□ 0.12
Scn2aA0A0J9YTW6 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Scn2aA0A0J9YTW6 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms