Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC13.84□□□□□ -0.19
Trbv19A0A0B4J1H4 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trbv19A0A0B4J1H4 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
Trbv19A0A0B4J1H4 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC13.84□□□□□ -0.19
Trbv19A0A0B4J1H4 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trbv19A0A0B4J1H4 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trbv19A0A0B4J1H4 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trbv19A0A0B4J1H4 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv19A0A0B4J1H4 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv19A0A0B4J1H4 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Trbv19A0A0B4J1H4 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv19A0A0B4J1H4 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC13.83□□□□□ -0.2
Trbv19A0A0B4J1H4 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv19A0A0B4J1H4 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv19A0A0B4J1H4 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
Trbv19A0A0B4J1H4 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC13.83□□□□□ -0.2
Trbv19A0A0B4J1H4 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC13.83□□□□□ -0.2
Trbv19A0A0B4J1H4 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Trbv19A0A0B4J1H4 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv19A0A0B4J1H4 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv19A0A0B4J1H4 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trbv19A0A0B4J1H4 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
Trbv19A0A0B4J1H4 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv19A0A0B4J1H4 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv19A0A0B4J1H4 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv19A0A0B4J1H4 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trbv19A0A0B4J1H4 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv19A0A0B4J1H4 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv19A0A0B4J1H4 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv19A0A0B4J1H4 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv19A0A0B4J1H4 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv19A0A0B4J1H4 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv19A0A0B4J1H4 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv19A0A0B4J1H4 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv19A0A0B4J1H4 Gm27275-201ENSMUST00000184318 272 ntBASIC13.82□□□□□ -0.2
Trbv19A0A0B4J1H4 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv19A0A0B4J1H4 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv19A0A0B4J1H4 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC13.82□□□□□ -0.2
Trbv19A0A0B4J1H4 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv19A0A0B4J1H4 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv19A0A0B4J1H4 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv19A0A0B4J1H4 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.82□□□□□ -0.2
Trbv19A0A0B4J1H4 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv19A0A0B4J1H4 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv19A0A0B4J1H4 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv19A0A0B4J1H4 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trbv19A0A0B4J1H4 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv19A0A0B4J1H4 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv19A0A0B4J1H4 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv19A0A0B4J1H4 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv19A0A0B4J1H4 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trbv19A0A0B4J1H4 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC13.81□□□□□ -0.2
Trbv19A0A0B4J1H4 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv19A0A0B4J1H4 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC13.81□□□□□ -0.2
Trbv19A0A0B4J1H4 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC13.81□□□□□ -0.2
Trbv19A0A0B4J1H4 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC13.81□□□□□ -0.2
Trbv19A0A0B4J1H4 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC13.81□□□□□ -0.2
Trbv19A0A0B4J1H4 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC13.81□□□□□ -0.2
Trbv19A0A0B4J1H4 AC166341.7-201ENSMUST00000221698 126 ntBASIC13.81□□□□□ -0.2
Trbv19A0A0B4J1H4 Gm18025-201ENSMUST00000221733 862 ntBASIC13.81□□□□□ -0.2
Trbv19A0A0B4J1H4 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv19A0A0B4J1H4 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv19A0A0B4J1H4 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Trbv19A0A0B4J1H4 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Trbv19A0A0B4J1H4 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv19A0A0B4J1H4 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv19A0A0B4J1H4 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Trbv19A0A0B4J1H4 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv19A0A0B4J1H4 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv19A0A0B4J1H4 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv19A0A0B4J1H4 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv19A0A0B4J1H4 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv19A0A0B4J1H4 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv19A0A0B4J1H4 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv19A0A0B4J1H4 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv19A0A0B4J1H4 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
Trbv19A0A0B4J1H4 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Trbv19A0A0B4J1H4 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.81□□□□□ -0.2
Trbv19A0A0B4J1H4 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv19A0A0B4J1H4 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC13.8□□□□□ -0.2
Trbv19A0A0B4J1H4 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trbv19A0A0B4J1H4 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv19A0A0B4J1H4 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Trbv19A0A0B4J1H4 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv19A0A0B4J1H4 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv19A0A0B4J1H4 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv19A0A0B4J1H4 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv19A0A0B4J1H4 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv19A0A0B4J1H4 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv19A0A0B4J1H4 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Trbv19A0A0B4J1H4 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trbv19A0A0B4J1H4 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Trbv19A0A0B4J1H4 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC13.8□□□□□ -0.2
Trbv19A0A0B4J1H4 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Trbv19A0A0B4J1H4 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv19A0A0B4J1H4 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv19A0A0B4J1H4 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv19A0A0B4J1H4 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv19A0A0B4J1H4 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Trbv19A0A0B4J1H4 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms