Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav17A0A075B655 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav17A0A075B655 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav17A0A075B655 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav17A0A075B655 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav17A0A075B655 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav17A0A075B655 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav17A0A075B655 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav17A0A075B655 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav17A0A075B655 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trav17A0A075B655 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav17A0A075B655 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC13.72□□□□□ -0.21
Trav17A0A075B655 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav17A0A075B655 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav17A0A075B655 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav17A0A075B655 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav17A0A075B655 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav17A0A075B655 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trav17A0A075B655 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav17A0A075B655 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav17A0A075B655 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Trav17A0A075B655 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav17A0A075B655 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav17A0A075B655 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav17A0A075B655 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
Trav17A0A075B655 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav17A0A075B655 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav17A0A075B655 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav17A0A075B655 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav17A0A075B655 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav17A0A075B655 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav17A0A075B655 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav17A0A075B655 Gm13216-201ENSMUST00000117145 591 ntBASIC13.7□□□□□ -0.22
Trav17A0A075B655 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav17A0A075B655 Gm10493-201ENSMUST00000097270 612 ntBASIC13.7□□□□□ -0.22
Trav17A0A075B655 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav17A0A075B655 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav17A0A075B655 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav17A0A075B655 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav17A0A075B655 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trav17A0A075B655 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav17A0A075B655 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav17A0A075B655 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav17A0A075B655 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav17A0A075B655 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav17A0A075B655 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav17A0A075B655 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trav17A0A075B655 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav17A0A075B655 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav17A0A075B655 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav17A0A075B655 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav17A0A075B655 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav17A0A075B655 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav17A0A075B655 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trav17A0A075B655 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC13.69□□□□□ -0.22
Trav17A0A075B655 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav17A0A075B655 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav17A0A075B655 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trav17A0A075B655 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.69□□□□□ -0.22
Trav17A0A075B655 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav17A0A075B655 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav17A0A075B655 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav17A0A075B655 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav17A0A075B655 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav17A0A075B655 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav17A0A075B655 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav17A0A075B655 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav17A0A075B655 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav17A0A075B655 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav17A0A075B655 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Trav17A0A075B655 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav17A0A075B655 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav17A0A075B655 Gm2399-201ENSMUST00000104944 225 ntBASIC13.68□□□□□ -0.22
Trav17A0A075B655 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav17A0A075B655 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC13.68□□□□□ -0.22
Trav17A0A075B655 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC13.68□□□□□ -0.22
Trav17A0A075B655 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav17A0A075B655 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC13.68□□□□□ -0.22
Trav17A0A075B655 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav17A0A075B655 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav17A0A075B655 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC13.68□□□□□ -0.22
Trav17A0A075B655 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav17A0A075B655 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav17A0A075B655 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav17A0A075B655 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav17A0A075B655 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Trav17A0A075B655 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav17A0A075B655 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav17A0A075B655 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav17A0A075B655 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav17A0A075B655 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav17A0A075B655 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav17A0A075B655 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav17A0A075B655 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC13.67□□□□□ -0.22
Trav17A0A075B655 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC13.67□□□□□ -0.22
Trav17A0A075B655 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav17A0A075B655 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav17A0A075B655 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav17A0A075B655 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav17A0A075B655 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms