Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav1A0A075B5Z4 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.99■□□□□ 0.15
Trav1A0A075B5Z4 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
Trav1A0A075B5Z4 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav1A0A075B5Z4 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav1A0A075B5Z4 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav1A0A075B5Z4 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.98■□□□□ 0.15
Trav1A0A075B5Z4 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav1A0A075B5Z4 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav1A0A075B5Z4 Gm15378-201ENSMUST00000121894 207 ntBASIC15.98■□□□□ 0.15
Trav1A0A075B5Z4 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Trav1A0A075B5Z4 Gm17661-201ENSMUST00000170317 270 ntBASIC15.98■□□□□ 0.15
Trav1A0A075B5Z4 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav1A0A075B5Z4 Gm10698-201ENSMUST00000182663 604 ntBASIC15.98■□□□□ 0.15
Trav1A0A075B5Z4 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC15.98■□□□□ 0.15
Trav1A0A075B5Z4 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav1A0A075B5Z4 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav1A0A075B5Z4 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.98■□□□□ 0.15
Trav1A0A075B5Z4 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav1A0A075B5Z4 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav1A0A075B5Z4 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav1A0A075B5Z4 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav1A0A075B5Z4 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav1A0A075B5Z4 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.98■□□□□ 0.15
Trav1A0A075B5Z4 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav1A0A075B5Z4 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav1A0A075B5Z4 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav1A0A075B5Z4 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav1A0A075B5Z4 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav1A0A075B5Z4 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav1A0A075B5Z4 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav1A0A075B5Z4 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav1A0A075B5Z4 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav1A0A075B5Z4 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav1A0A075B5Z4 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Trav1A0A075B5Z4 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav1A0A075B5Z4 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav1A0A075B5Z4 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav1A0A075B5Z4 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.97■□□□□ 0.15
Trav1A0A075B5Z4 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
Trav1A0A075B5Z4 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav1A0A075B5Z4 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav1A0A075B5Z4 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav1A0A075B5Z4 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav1A0A075B5Z4 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav1A0A075B5Z4 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav1A0A075B5Z4 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav1A0A075B5Z4 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav1A0A075B5Z4 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
Trav1A0A075B5Z4 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav1A0A075B5Z4 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.96■□□□□ 0.15
Trav1A0A075B5Z4 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav1A0A075B5Z4 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav1A0A075B5Z4 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav1A0A075B5Z4 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav1A0A075B5Z4 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.96■□□□□ 0.15
Trav1A0A075B5Z4 Gm37025-201ENSMUST00000195159 829 ntBASIC15.96■□□□□ 0.15
Trav1A0A075B5Z4 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav1A0A075B5Z4 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav1A0A075B5Z4 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Trav1A0A075B5Z4 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav1A0A075B5Z4 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.96■□□□□ 0.15
Trav1A0A075B5Z4 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav1A0A075B5Z4 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav1A0A075B5Z4 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
Trav1A0A075B5Z4 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.96■□□□□ 0.14
Trav1A0A075B5Z4 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav1A0A075B5Z4 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav1A0A075B5Z4 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav1A0A075B5Z4 AC122335.2-201ENSMUST00000213901 6181 ntBASIC15.95■□□□□ 0.14
Trav1A0A075B5Z4 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav1A0A075B5Z4 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav1A0A075B5Z4 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC15.95■□□□□ 0.14
Trav1A0A075B5Z4 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav1A0A075B5Z4 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav1A0A075B5Z4 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav1A0A075B5Z4 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.95■□□□□ 0.14
Trav1A0A075B5Z4 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav1A0A075B5Z4 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav1A0A075B5Z4 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav1A0A075B5Z4 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Trav1A0A075B5Z4 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav1A0A075B5Z4 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav1A0A075B5Z4 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Trav1A0A075B5Z4 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav1A0A075B5Z4 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav1A0A075B5Z4 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trav1A0A075B5Z4 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav1A0A075B5Z4 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav1A0A075B5Z4 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
Trav1A0A075B5Z4 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav1A0A075B5Z4 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav1A0A075B5Z4 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav1A0A075B5Z4 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav1A0A075B5Z4 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Trav1A0A075B5Z4 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
Trav1A0A075B5Z4 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Trav1A0A075B5Z4 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav1A0A075B5Z4 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC15.94■□□□□ 0.14
Trav1A0A075B5Z4 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms