Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm27991-201ENSMUST00000184804 137 ntBASIC2.17□□□□□ -2.06
Scn8aQ9WTU3 Gm28744-201ENSMUST00000189939 340 ntBASIC2.17□□□□□ -2.06
Scn8aQ9WTU3 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.17□□□□□ -2.06
Scn8aQ9WTU3 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC2.17□□□□□ -2.06
Scn8aQ9WTU3 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC2.17□□□□□ -2.06
Scn8aQ9WTU3 AC116395.1-201ENSMUST00000225480 1143 ntBASIC2.17□□□□□ -2.06
Scn8aQ9WTU3 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
Scn8aQ9WTU3 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
Scn8aQ9WTU3 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
Scn8aQ9WTU3 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Scn8aQ9WTU3 Cyp2j7-ps3-201ENSMUST00000121405 206 ntBASIC2.16□□□□□ -2.06
Scn8aQ9WTU3 Gm9613-201ENSMUST00000171662 196 ntBASIC2.16□□□□□ -2.06
Scn8aQ9WTU3 Gm20526-201ENSMUST00000173416 158 ntBASIC2.16□□□□□ -2.06
Scn8aQ9WTU3 Mir6905-201ENSMUST00000184228 70 ntBASIC2.16□□□□□ -2.06
Scn8aQ9WTU3 Mir6901-201ENSMUST00000185062 62 ntBASIC2.16□□□□□ -2.06
Scn8aQ9WTU3 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC2.16□□□□□ -2.06
Scn8aQ9WTU3 Gm36962-201ENSMUST00000192114 1761 ntBASIC2.16□□□□□ -2.06
Scn8aQ9WTU3 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Scn8aQ9WTU3 Gm11843-201ENSMUST00000118984 425 ntBASIC2.16□□□□□ -2.06
Scn8aQ9WTU3 Gm9785-202ENSMUST00000144563 593 ntBASIC2.16□□□□□ -2.06
Scn8aQ9WTU3 Gm23342-201ENSMUST00000158958 115 ntBASIC2.16□□□□□ -2.06
Scn8aQ9WTU3 Gm8502-201ENSMUST00000185708 901 ntBASIC2.16□□□□□ -2.06
Scn8aQ9WTU3 Gm21147-201ENSMUST00000186046 913 ntBASIC2.16□□□□□ -2.06
Scn8aQ9WTU3 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Scn8aQ9WTU3 Gm29137-201ENSMUST00000190301 520 ntTSL 5 BASIC2.16□□□□□ -2.06
Scn8aQ9WTU3 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC2.16□□□□□ -2.06
Scn8aQ9WTU3 Gm5655-201ENSMUST00000221078 901 ntBASIC2.16□□□□□ -2.06
Scn8aQ9WTU3 Gm9628-201ENSMUST00000222169 725 ntBASIC2.16□□□□□ -2.06
Scn8aQ9WTU3 AC170086.1-201ENSMUST00000225190 497 ntBASIC2.16□□□□□ -2.06
Scn8aQ9WTU3 CT025525.1-201ENSMUST00000226325 1054 ntBASIC2.16□□□□□ -2.06
Scn8aQ9WTU3 Gm6207-201ENSMUST00000120075 1386 ntBASIC2.16□□□□□ -2.06
Scn8aQ9WTU3 Gm6228-201ENSMUST00000178856 1386 ntBASIC2.16□□□□□ -2.06
Scn8aQ9WTU3 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.06
Scn8aQ9WTU3 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.15□□□□□ -2.06
Scn8aQ9WTU3 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
Scn8aQ9WTU3 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Scn8aQ9WTU3 Gm23548-201ENSMUST00000158963 106 ntBASIC2.15□□□□□ -2.07
Scn8aQ9WTU3 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.15□□□□□ -2.07
Scn8aQ9WTU3 Gm28975-201ENSMUST00000186412 686 ntBASIC2.15□□□□□ -2.07
Scn8aQ9WTU3 Gm9375-201ENSMUST00000208899 903 ntBASIC2.15□□□□□ -2.07
Scn8aQ9WTU3 Gm6012-201ENSMUST00000210821 730 ntBASIC2.15□□□□□ -2.07
Scn8aQ9WTU3 AC132384.9-201ENSMUST00000218085 277 ntBASIC2.15□□□□□ -2.07
Scn8aQ9WTU3 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC2.15□□□□□ -2.07
Scn8aQ9WTU3 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Scn8aQ9WTU3 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Scn8aQ9WTU3 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC2.15□□□□□ -2.07
Scn8aQ9WTU3 CT009510.2-203ENSMUST00000226704 2136 ntBASIC2.15□□□□□ -2.07
Scn8aQ9WTU3 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Scn8aQ9WTU3 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
Scn8aQ9WTU3 Gm22486-201ENSMUST00000116815 137 ntBASIC2.14□□□□□ -2.07
Scn8aQ9WTU3 n-R5s191-201ENSMUST00000122724 116 ntBASIC2.14□□□□□ -2.07
Scn8aQ9WTU3 Gm29604-201ENSMUST00000187176 163 ntBASIC2.14□□□□□ -2.07
Scn8aQ9WTU3 Gm29553-201ENSMUST00000189692 279 ntBASIC2.14□□□□□ -2.07
Scn8aQ9WTU3 Gm19418-201ENSMUST00000197436 580 ntBASIC2.14□□□□□ -2.07
Scn8aQ9WTU3 AC164424.1-201ENSMUST00000221690 170 ntBASIC2.14□□□□□ -2.07
Scn8aQ9WTU3 AC122465.2-201ENSMUST00000221774 354 ntBASIC2.14□□□□□ -2.07
Scn8aQ9WTU3 AC154532.2-201ENSMUST00000228947 598 ntBASIC2.14□□□□□ -2.07
Scn8aQ9WTU3 Gm23447-201ENSMUST00000082798 163 ntBASIC2.14□□□□□ -2.07
Scn8aQ9WTU3 Gm26064-201ENSMUST00000083381 109 ntBASIC2.14□□□□□ -2.07
Scn8aQ9WTU3 Olfr629-202ENSMUST00000213906 2548 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
Scn8aQ9WTU3 AC154681.1-201ENSMUST00000225876 1735 ntBASIC2.14□□□□□ -2.07
Scn8aQ9WTU3 Gm12230-201ENSMUST00000118301 454 ntBASIC2.14□□□□□ -2.07
Scn8aQ9WTU3 Gm14253-201ENSMUST00000122112 639 ntBASIC2.14□□□□□ -2.07
Scn8aQ9WTU3 Trav20-201ENSMUST00000142754 347 ntBASIC2.14□□□□□ -2.07
Scn8aQ9WTU3 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.14□□□□□ -2.07
Scn8aQ9WTU3 Gm24237-201ENSMUST00000157790 132 ntBASIC2.14□□□□□ -2.07
Scn8aQ9WTU3 Gm22517-201ENSMUST00000158265 136 ntBASIC2.14□□□□□ -2.07
Scn8aQ9WTU3 Gm23005-201ENSMUST00000158950 136 ntBASIC2.14□□□□□ -2.07
Scn8aQ9WTU3 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC2.14□□□□□ -2.07
Scn8aQ9WTU3 Gm43848-201ENSMUST00000198060 1247 ntBASIC2.14□□□□□ -2.07
Scn8aQ9WTU3 Gm43804-201ENSMUST00000198280 456 ntBASIC2.14□□□□□ -2.07
Scn8aQ9WTU3 Gm44718-201ENSMUST00000206886 359 ntBASIC2.14□□□□□ -2.07
Scn8aQ9WTU3 AC140451.2-202ENSMUST00000226156 574 ntBASIC2.14□□□□□ -2.07
Scn8aQ9WTU3 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Scn8aQ9WTU3 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Scn8aQ9WTU3 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Scn8aQ9WTU3 Gm14771-201ENSMUST00000118249 203 ntBASIC2.13□□□□□ -2.07
Scn8aQ9WTU3 Gm4910-201ENSMUST00000119605 366 ntBASIC2.13□□□□□ -2.07
Scn8aQ9WTU3 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC2.13□□□□□ -2.07
Scn8aQ9WTU3 Gm23048-201ENSMUST00000157237 129 ntBASIC2.13□□□□□ -2.07
Scn8aQ9WTU3 Gm18354-201ENSMUST00000173515 1068 ntBASIC2.13□□□□□ -2.07
Scn8aQ9WTU3 Vmn1r-ps14-201ENSMUST00000176859 913 ntBASIC2.13□□□□□ -2.07
Scn8aQ9WTU3 Mir6997-201ENSMUST00000184313 71 ntBASIC2.13□□□□□ -2.07
Scn8aQ9WTU3 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Scn8aQ9WTU3 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Scn8aQ9WTU3 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC2.13□□□□□ -2.07
Scn8aQ9WTU3 Gm44266-201ENSMUST00000205235 500 ntBASIC2.13□□□□□ -2.07
Scn8aQ9WTU3 AC159246.1-201ENSMUST00000214478 249 ntBASIC2.13□□□□□ -2.07
Scn8aQ9WTU3 Olfr883-201ENSMUST00000072974 930 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Scn8aQ9WTU3 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Scn8aQ9WTU3 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.13□□□□□ -2.07
Scn8aQ9WTU3 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Scn8aQ9WTU3 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Scn8aQ9WTU3 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC2.13□□□□□ -2.07
Scn8aQ9WTU3 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Scn8aQ9WTU3 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Scn8aQ9WTU3 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Scn8aQ9WTU3 Mir344e-201ENSMUST00000104677 66 ntBASIC2.12□□□□□ -2.07
Scn8aQ9WTU3 Gm13219-202ENSMUST00000152599 685 ntTSL 3 BASIC2.12□□□□□ -2.07
Scn8aQ9WTU3 Gm25113-201ENSMUST00000157185 143 ntBASIC2.12□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms