Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm15760-201ENSMUST00000119553 283 ntBASIC2.49□□□□□ -2.01
Scn11aQ9R053 Defa-ps8-201ENSMUST00000120972 279 ntBASIC2.49□□□□□ -2.01
Scn11aQ9R053 n-R5s150-201ENSMUST00000122705 108 ntBASIC2.49□□□□□ -2.01
Scn11aQ9R053 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC2.49□□□□□ -2.01
Scn11aQ9R053 Mir3968-201ENSMUST00000175355 100 ntBASIC2.49□□□□□ -2.01
Scn11aQ9R053 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Scn11aQ9R053 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Scn11aQ9R053 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Scn11aQ9R053 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Scn11aQ9R053 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Scn11aQ9R053 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Scn11aQ9R053 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Scn11aQ9R053 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Scn11aQ9R053 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Scn11aQ9R053 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Scn11aQ9R053 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Scn11aQ9R053 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Scn11aQ9R053 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Scn11aQ9R053 Gm8679-201ENSMUST00000210651 1036 ntBASIC2.49□□□□□ -2.01
Scn11aQ9R053 Gm45639-201ENSMUST00000211205 710 ntTSL 5 BASIC2.49□□□□□ -2.01
Scn11aQ9R053 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC2.49□□□□□ -2.01
Scn11aQ9R053 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC2.49□□□□□ -2.01
Scn11aQ9R053 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC2.49□□□□□ -2.01
Scn11aQ9R053 Gm4263-202ENSMUST00000221392 667 ntBASIC2.49□□□□□ -2.01
Scn11aQ9R053 Gm12782-201ENSMUST00000117519 727 ntBASIC2.48□□□□□ -2.01
Scn11aQ9R053 Gm24475-201ENSMUST00000157435 143 ntBASIC2.48□□□□□ -2.01
Scn11aQ9R053 Olfr1228-201ENSMUST00000190757 1094 ntAPPRIS P2 BASIC2.48□□□□□ -2.01
Scn11aQ9R053 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC2.48□□□□□ -2.01
Scn11aQ9R053 AC124433.2-201ENSMUST00000223867 291 ntBASIC2.48□□□□□ -2.01
Scn11aQ9R053 AC130823.2-201ENSMUST00000226169 290 ntBASIC2.48□□□□□ -2.01
Scn11aQ9R053 Gm42967-201ENSMUST00000198647 2312 ntBASIC2.48□□□□□ -2.01
Scn11aQ9R053 Gm43201-201ENSMUST00000195925 3416 ntBASIC2.48□□□□□ -2.01
Scn11aQ9R053 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Scn11aQ9R053 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Scn11aQ9R053 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Scn11aQ9R053 Gm16328-201ENSMUST00000126985 196 ntBASIC2.47□□□□□ -2.01
Scn11aQ9R053 Gm25555-201ENSMUST00000158078 111 ntBASIC2.47□□□□□ -2.01
Scn11aQ9R053 Gm2389-201ENSMUST00000160487 189 ntBASIC2.47□□□□□ -2.01
Scn11aQ9R053 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC2.47□□□□□ -2.01
Scn11aQ9R053 AC129308.2-201ENSMUST00000224588 789 ntBASIC2.47□□□□□ -2.01
Scn11aQ9R053 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.47□□□□□ -2.01
Scn11aQ9R053 Gm44438-201ENSMUST00000204388 3236 ntBASIC2.47□□□□□ -2.01
Scn11aQ9R053 AC121598.3-201ENSMUST00000227179 1643 ntBASIC2.47□□□□□ -2.01
Scn11aQ9R053 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC2.46□□□□□ -2.01
Scn11aQ9R053 Mir9-3-201ENSMUST00000175497 90 ntBASIC2.46□□□□□ -2.02
Scn11aQ9R053 Gm28155-201ENSMUST00000191066 151 ntBASIC2.46□□□□□ -2.02
Scn11aQ9R053 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.46□□□□□ -2.02
Scn11aQ9R053 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
Scn11aQ9R053 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Scn11aQ9R053 Gm11460-201ENSMUST00000118200 361 ntBASIC2.46□□□□□ -2.02
Scn11aQ9R053 Gm7182-201ENSMUST00000193351 732 ntBASIC2.46□□□□□ -2.02
Scn11aQ9R053 Gm43848-201ENSMUST00000198060 1247 ntBASIC2.46□□□□□ -2.02
Scn11aQ9R053 Gm17850-201ENSMUST00000210023 1154 ntBASIC2.46□□□□□ -2.02
Scn11aQ9R053 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC2.46□□□□□ -2.02
Scn11aQ9R053 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Scn11aQ9R053 Gm25813-201ENSMUST00000082748 191 ntBASIC2.46□□□□□ -2.02
Scn11aQ9R053 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Scn11aQ9R053 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Scn11aQ9R053 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC2.45□□□□□ -2.02
Scn11aQ9R053 Gm28794-201ENSMUST00000185276 136 ntBASIC2.45□□□□□ -2.02
Scn11aQ9R053 Trav15d-3-201ENSMUST00000198604 167 ntBASIC2.45□□□□□ -2.02
Scn11aQ9R053 Trav15n-3-201ENSMUST00000200498 168 ntBASIC2.45□□□□□ -2.02
Scn11aQ9R053 Vmn1r-ps5-201ENSMUST00000202963 931 ntBASIC2.45□□□□□ -2.02
Scn11aQ9R053 Gm25402-201ENSMUST00000082966 131 ntBASIC2.45□□□□□ -2.02
Scn11aQ9R053 Snora69-201ENSMUST00000083708 131 ntBASIC2.45□□□□□ -2.02
Scn11aQ9R053 Gm24261-201ENSMUST00000083744 104 ntBASIC2.45□□□□□ -2.02
Scn11aQ9R053 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
Scn11aQ9R053 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC2.44□□□□□ -2.02
Scn11aQ9R053 Gm23179-201ENSMUST00000158693 304 ntBASIC2.44□□□□□ -2.02
Scn11aQ9R053 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.44□□□□□ -2.02
Scn11aQ9R053 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC2.44□□□□□ -2.02
Scn11aQ9R053 AC073947.1-201ENSMUST00000216991 649 ntBASIC2.44□□□□□ -2.02
Scn11aQ9R053 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Scn11aQ9R053 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Scn11aQ9R053 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC2.44□□□□□ -2.02
Scn11aQ9R053 Gm25496-201ENSMUST00000104430 120 ntBASIC2.44□□□□□ -2.02
Scn11aQ9R053 Gm13432-201ENSMUST00000118861 241 ntBASIC2.44□□□□□ -2.02
Scn11aQ9R053 Gm3030-201ENSMUST00000163410 516 ntBASIC2.44□□□□□ -2.02
Scn11aQ9R053 Mir6394-201ENSMUST00000184738 99 ntBASIC2.44□□□□□ -2.02
Scn11aQ9R053 AC156801.2-201ENSMUST00000213613 487 ntTSL 5 BASIC2.44□□□□□ -2.02
Scn11aQ9R053 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Scn11aQ9R053 AC107663.3-201ENSMUST00000225873 601 ntBASIC2.44□□□□□ -2.02
Scn11aQ9R053 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Scn11aQ9R053 Gm22245-201ENSMUST00000082479 103 ntBASIC2.44□□□□□ -2.02
Scn11aQ9R053 Mir200b-201ENSMUST00000083615 70 ntBASIC2.44□□□□□ -2.02
Scn11aQ9R053 Gm14541-201ENSMUST00000118985 157 ntBASIC2.43□□□□□ -2.02
Scn11aQ9R053 Gm23183-201ENSMUST00000122595 323 ntBASIC2.43□□□□□ -2.02
Scn11aQ9R053 Gm37455-201ENSMUST00000191993 529 ntBASIC2.43□□□□□ -2.02
Scn11aQ9R053 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC2.43□□□□□ -2.02
Scn11aQ9R053 Gm46146-201ENSMUST00000217483 346 ntBASIC2.43□□□□□ -2.02
Scn11aQ9R053 AC154828.2-201ENSMUST00000220908 1070 ntBASIC2.43□□□□□ -2.02
Scn11aQ9R053 Olfr589-201ENSMUST00000061055 954 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Scn11aQ9R053 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
Scn11aQ9R053 Gm23347-201ENSMUST00000083823 82 ntBASIC2.43□□□□□ -2.02
Scn11aQ9R053 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Scn11aQ9R053 Gm10730-201ENSMUST00000194097 2723 ntBASIC2.42□□□□□ -2.02
Scn11aQ9R053 Gm14602-201ENSMUST00000118625 340 ntBASIC2.42□□□□□ -2.02
Scn11aQ9R053 Gm22159-201ENSMUST00000158412 130 ntBASIC2.42□□□□□ -2.02
Scn11aQ9R053 Gm23583-201ENSMUST00000158533 289 ntBASIC2.42□□□□□ -2.02
Scn11aQ9R053 Gm19193-201ENSMUST00000190263 590 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms