Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 CT030704.1-201ENSMUST00000227521 699 ntBASIC1.96□□□□□ -2.1
Trem3Q9JKE1 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Trem3Q9JKE1 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Trem3Q9JKE1 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Trem3Q9JKE1 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
Trem3Q9JKE1 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Trem3Q9JKE1 Olfr895-201ENSMUST00000093864 951 ntBASIC1.96□□□□□ -2.1
Trem3Q9JKE1 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Trem3Q9JKE1 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC1.96□□□□□ -2.1
Trem3Q9JKE1 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Trem3Q9JKE1 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Trem3Q9JKE1 Mir599-201ENSMUST00000102378 88 ntBASIC1.95□□□□□ -2.1
Trem3Q9JKE1 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Trem3Q9JKE1 Gm12697-201ENSMUST00000118008 667 ntBASIC1.95□□□□□ -2.1
Trem3Q9JKE1 Gm14602-201ENSMUST00000118625 340 ntBASIC1.95□□□□□ -2.1
Trem3Q9JKE1 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
Trem3Q9JKE1 Gm12155-201ENSMUST00000121267 160 ntBASIC1.95□□□□□ -2.1
Trem3Q9JKE1 Gm12819-201ENSMUST00000122223 629 ntBASIC1.95□□□□□ -2.1
Trem3Q9JKE1 Gm23867-201ENSMUST00000122649 274 ntBASIC1.95□□□□□ -2.1
Trem3Q9JKE1 n-R5s191-201ENSMUST00000122724 116 ntBASIC1.95□□□□□ -2.1
Trem3Q9JKE1 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Trem3Q9JKE1 Gm24210-201ENSMUST00000158263 133 ntBASIC1.95□□□□□ -2.1
Trem3Q9JKE1 Gm22947-201ENSMUST00000158559 91 ntBASIC1.95□□□□□ -2.1
Trem3Q9JKE1 Gm24546-201ENSMUST00000158652 102 ntBASIC1.95□□□□□ -2.1
Trem3Q9JKE1 Gm16289-201ENSMUST00000162079 183 ntBASIC1.95□□□□□ -2.1
Trem3Q9JKE1 Gm21489-201ENSMUST00000189668 818 ntBASIC1.95□□□□□ -2.1
Trem3Q9JKE1 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC1.95□□□□□ -2.1
Trem3Q9JKE1 AC153899.1-201ENSMUST00000214092 1117 ntBASIC1.95□□□□□ -2.1
Trem3Q9JKE1 AC145736.1-201ENSMUST00000214661 479 ntBASIC1.95□□□□□ -2.1
Trem3Q9JKE1 CT030159.4-201ENSMUST00000221966 395 ntBASIC1.95□□□□□ -2.1
Trem3Q9JKE1 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC1.95□□□□□ -2.1
Trem3Q9JKE1 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
Trem3Q9JKE1 AC154506.1-201ENSMUST00000225178 621 ntBASIC1.95□□□□□ -2.1
Trem3Q9JKE1 AC158395.1-201ENSMUST00000227206 452 ntBASIC1.95□□□□□ -2.1
Trem3Q9JKE1 Gm25796-201ENSMUST00000082645 163 ntBASIC1.95□□□□□ -2.1
Trem3Q9JKE1 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
Trem3Q9JKE1 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
Trem3Q9JKE1 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
Trem3Q9JKE1 Gm37143-201ENSMUST00000195180 3259 ntBASIC1.94□□□□□ -2.1
Trem3Q9JKE1 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
Trem3Q9JKE1 Gm42482-201ENSMUST00000198904 1947 ntBASIC1.94□□□□□ -2.1
Trem3Q9JKE1 AC152951.2-201ENSMUST00000218293 3587 ntBASIC1.94□□□□□ -2.1
Trem3Q9JKE1 Gm14843-201ENSMUST00000119596 212 ntBASIC1.94□□□□□ -2.1
Trem3Q9JKE1 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC1.94□□□□□ -2.1
Trem3Q9JKE1 Gm12238-201ENSMUST00000127764 124 ntBASIC1.94□□□□□ -2.1
Trem3Q9JKE1 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC1.94□□□□□ -2.1
Trem3Q9JKE1 Gm23642-201ENSMUST00000157858 258 ntBASIC1.94□□□□□ -2.1
Trem3Q9JKE1 Gm24771-201ENSMUST00000158508 137 ntBASIC1.94□□□□□ -2.1
Trem3Q9JKE1 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
Trem3Q9JKE1 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Trem3Q9JKE1 Gm8161-201ENSMUST00000168739 481 ntBASIC1.94□□□□□ -2.1
Trem3Q9JKE1 Gm25944-201ENSMUST00000178758 94 ntBASIC1.94□□□□□ -2.1
Trem3Q9JKE1 Gm27470-201ENSMUST00000184070 210 ntBASIC1.94□□□□□ -2.1
Trem3Q9JKE1 Mir6401-201ENSMUST00000184499 109 ntBASIC1.94□□□□□ -2.1
Trem3Q9JKE1 Mir6975-201ENSMUST00000184879 61 ntBASIC1.94□□□□□ -2.1
Trem3Q9JKE1 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
Trem3Q9JKE1 Gm38018-201ENSMUST00000195651 540 ntBASIC1.94□□□□□ -2.1
Trem3Q9JKE1 Gm43550-201ENSMUST00000200597 303 ntBASIC1.94□□□□□ -2.1
Trem3Q9JKE1 Gm45146-201ENSMUST00000207108 221 ntBASIC1.94□□□□□ -2.1
Trem3Q9JKE1 Gm44857-201ENSMUST00000208331 196 ntBASIC1.94□□□□□ -2.1
Trem3Q9JKE1 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC1.94□□□□□ -2.1
Trem3Q9JKE1 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC1.94□□□□□ -2.1
Trem3Q9JKE1 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC1.94□□□□□ -2.1
Trem3Q9JKE1 AC126673.2-201ENSMUST00000221052 686 ntBASIC1.94□□□□□ -2.1
Trem3Q9JKE1 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
Trem3Q9JKE1 AC154257.2-201ENSMUST00000224166 340 ntBASIC1.94□□□□□ -2.1
Trem3Q9JKE1 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Trem3Q9JKE1 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Trem3Q9JKE1 Gm25628-201ENSMUST00000084002 105 ntBASIC1.94□□□□□ -2.1
Trem3Q9JKE1 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Trem3Q9JKE1 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC1.94□□□□□ -2.1
Trem3Q9JKE1 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
Trem3Q9JKE1 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
Trem3Q9JKE1 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
Trem3Q9JKE1 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
Trem3Q9JKE1 Mir804-201ENSMUST00000103251 95 ntBASIC1.93□□□□□ -2.1
Trem3Q9JKE1 Gm11943-201ENSMUST00000119473 327 ntBASIC1.93□□□□□ -2.1
Trem3Q9JKE1 Gm6071-201ENSMUST00000119561 440 ntBASIC1.93□□□□□ -2.1
Trem3Q9JKE1 Gm3835-201ENSMUST00000120752 403 ntBASIC1.93□□□□□ -2.1
Trem3Q9JKE1 Gm13862-201ENSMUST00000121220 197 ntBASIC1.93□□□□□ -2.1
Trem3Q9JKE1 Gm22478-201ENSMUST00000122570 154 ntBASIC1.93□□□□□ -2.1
Trem3Q9JKE1 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC1.93□□□□□ -2.1
Trem3Q9JKE1 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Trem3Q9JKE1 Gm3470-201ENSMUST00000160819 420 ntBASIC1.93□□□□□ -2.1
Trem3Q9JKE1 Gm37979-201ENSMUST00000193065 712 ntBASIC1.93□□□□□ -2.1
Trem3Q9JKE1 Mir7232-201ENSMUST00000197929 74 ntBASIC1.93□□□□□ -2.1
Trem3Q9JKE1 Gm35570-201ENSMUST00000198730 681 ntBASIC1.93□□□□□ -2.1
Trem3Q9JKE1 Gm44478-201ENSMUST00000204875 114 ntBASIC1.93□□□□□ -2.1
Trem3Q9JKE1 Gm45860-201ENSMUST00000212700 334 ntBASIC1.93□□□□□ -2.1
Trem3Q9JKE1 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC1.93□□□□□ -2.1
Trem3Q9JKE1 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC1.93□□□□□ -2.1
Trem3Q9JKE1 AC153801.1-201ENSMUST00000217904 947 ntBASIC1.93□□□□□ -2.1
Trem3Q9JKE1 Gm4921-201ENSMUST00000219804 992 ntBASIC1.93□□□□□ -2.1
Trem3Q9JKE1 AC122465.2-201ENSMUST00000221774 354 ntBASIC1.93□□□□□ -2.1
Trem3Q9JKE1 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
Trem3Q9JKE1 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
Trem3Q9JKE1 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC1.93□□□□□ -2.1
Trem3Q9JKE1 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
Trem3Q9JKE1 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
Trem3Q9JKE1 Gm10025-201ENSMUST00000079568 372 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 94.2 ms