Protein–RNA interactions for Protein: Q9ERP3

Trim54, Tripartite motif-containing protein 54, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim54Q9ERP3 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Trim54Q9ERP3 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Trim54Q9ERP3 Vmn1r22-202ENSMUST00000227650 3674 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
Trim54Q9ERP3 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Trim54Q9ERP3 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
Trim54Q9ERP3 Olfr577-202ENSMUST00000214080 3282 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Trim54Q9ERP3 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
Trim54Q9ERP3 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC3.91□□□□□ -1.78
Trim54Q9ERP3 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.91□□□□□ -1.78
Trim54Q9ERP3 Vmn2r-ps36-201ENSMUST00000172589 2562 ntBASIC3.91□□□□□ -1.78
Trim54Q9ERP3 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
Trim54Q9ERP3 Gm11490-201ENSMUST00000118128 272 ntBASIC3.91□□□□□ -1.78
Trim54Q9ERP3 Gm7308-201ENSMUST00000121087 447 ntBASIC3.91□□□□□ -1.78
Trim54Q9ERP3 Gm22107-201ENSMUST00000122548 100 ntBASIC3.91□□□□□ -1.78
Trim54Q9ERP3 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.91□□□□□ -1.78
Trim54Q9ERP3 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC3.91□□□□□ -1.78
Trim54Q9ERP3 Gm16327-201ENSMUST00000137146 228 ntBASIC3.91□□□□□ -1.78
Trim54Q9ERP3 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
Trim54Q9ERP3 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC3.91□□□□□ -1.78
Trim54Q9ERP3 Gm44343-201ENSMUST00000196702 90 ntBASIC3.91□□□□□ -1.78
Trim54Q9ERP3 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC3.91□□□□□ -1.78
Trim54Q9ERP3 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC3.91□□□□□ -1.78
Trim54Q9ERP3 Gm7984-201ENSMUST00000060640 538 ntBASIC3.91□□□□□ -1.78
Trim54Q9ERP3 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
Trim54Q9ERP3 Gm23097-201ENSMUST00000083448 105 ntBASIC3.91□□□□□ -1.78
Trim54Q9ERP3 Olfr1454-204ENSMUST00000217568 4215 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
Trim54Q9ERP3 Gm40020-201ENSMUST00000215677 1635 ntBASIC3.91□□□□□ -1.78
Trim54Q9ERP3 Gm37802-201ENSMUST00000194998 2643 ntBASIC3.91□□□□□ -1.78
Trim54Q9ERP3 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.9□□□□□ -1.78
Trim54Q9ERP3 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.78
Trim54Q9ERP3 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
Trim54Q9ERP3 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Trim54Q9ERP3 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
Trim54Q9ERP3 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Trim54Q9ERP3 Gm23577-201ENSMUST00000103950 110 ntBASIC3.9□□□□□ -1.79
Trim54Q9ERP3 Gm23744-201ENSMUST00000104231 149 ntBASIC3.9□□□□□ -1.79
Trim54Q9ERP3 Gm22497-201ENSMUST00000104499 131 ntBASIC3.9□□□□□ -1.79
Trim54Q9ERP3 Gm24831-201ENSMUST00000116778 126 ntBASIC3.9□□□□□ -1.79
Trim54Q9ERP3 Gm14362-201ENSMUST00000121679 273 ntBASIC3.9□□□□□ -1.79
Trim54Q9ERP3 n-R5s192-201ENSMUST00000122577 119 ntBASIC3.9□□□□□ -1.79
Trim54Q9ERP3 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Trim54Q9ERP3 Gm15254-201ENSMUST00000149567 273 ntBASIC3.9□□□□□ -1.79
Trim54Q9ERP3 4930522O17Rik-201ENSMUST00000155178 447 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Trim54Q9ERP3 Gm27592-201ENSMUST00000157729 126 ntBASIC3.9□□□□□ -1.79
Trim54Q9ERP3 Gm15946-201ENSMUST00000160654 423 ntBASIC3.9□□□□□ -1.79
Trim54Q9ERP3 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Trim54Q9ERP3 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC3.9□□□□□ -1.79
Trim54Q9ERP3 Gm26194-201ENSMUST00000175036 71 ntBASIC3.9□□□□□ -1.79
Trim54Q9ERP3 Gm22174-201ENSMUST00000175050 125 ntBASIC3.9□□□□□ -1.79
Trim54Q9ERP3 Gm22692-201ENSMUST00000175055 125 ntBASIC3.9□□□□□ -1.79
Trim54Q9ERP3 Gm27634-201ENSMUST00000175060 126 ntBASIC3.9□□□□□ -1.79
Trim54Q9ERP3 Gm22460-201ENSMUST00000175269 124 ntBASIC3.9□□□□□ -1.79
Trim54Q9ERP3 Gm25535-201ENSMUST00000175364 125 ntBASIC3.9□□□□□ -1.79
Trim54Q9ERP3 Gm24365-201ENSMUST00000175384 125 ntBASIC3.9□□□□□ -1.79
Trim54Q9ERP3 Gm44310-201ENSMUST00000175424 126 ntBASIC3.9□□□□□ -1.79
Trim54Q9ERP3 Gm22639-201ENSMUST00000175591 125 ntBASIC3.9□□□□□ -1.79
Trim54Q9ERP3 Gm24979-201ENSMUST00000178626 126 ntBASIC3.9□□□□□ -1.79
Trim54Q9ERP3 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC3.9□□□□□ -1.79
Trim54Q9ERP3 Gm7909-201ENSMUST00000182688 614 ntBASIC3.9□□□□□ -1.79
Trim54Q9ERP3 Gm27743-201ENSMUST00000185136 126 ntBASIC3.9□□□□□ -1.79
Trim54Q9ERP3 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Trim54Q9ERP3 Gm18403-201ENSMUST00000192907 529 ntBASIC3.9□□□□□ -1.79
Trim54Q9ERP3 Gm38088-201ENSMUST00000195829 241 ntBASIC3.9□□□□□ -1.79
Trim54Q9ERP3 Gm42475-201ENSMUST00000201212 295 ntBASIC3.9□□□□□ -1.79
Trim54Q9ERP3 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC3.9□□□□□ -1.79
Trim54Q9ERP3 Gm8785-201ENSMUST00000220259 487 ntBASIC3.9□□□□□ -1.79
Trim54Q9ERP3 1700015C15Rik-201ENSMUST00000221465 374 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
Trim54Q9ERP3 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Trim54Q9ERP3 AC139845.2-201ENSMUST00000227504 436 ntBASIC3.9□□□□□ -1.79
Trim54Q9ERP3 Gm25630-201ENSMUST00000084000 162 ntBASIC3.9□□□□□ -1.79
Trim54Q9ERP3 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
Trim54Q9ERP3 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
Trim54Q9ERP3 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.9□□□□□ -1.79
Trim54Q9ERP3 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.79
Trim54Q9ERP3 Gm15902-202ENSMUST00000219623 3477 ntBASIC3.9□□□□□ -1.79
Trim54Q9ERP3 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Trim54Q9ERP3 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Trim54Q9ERP3 Gm3584-201ENSMUST00000173822 2565 ntBASIC3.89□□□□□ -1.79
Trim54Q9ERP3 Gm43896-201ENSMUST00000203440 2032 ntBASIC3.89□□□□□ -1.79
Trim54Q9ERP3 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.89□□□□□ -1.79
Trim54Q9ERP3 Gm23530-201ENSMUST00000104564 137 ntBASIC3.89□□□□□ -1.79
Trim54Q9ERP3 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Trim54Q9ERP3 Gm23981-201ENSMUST00000157136 106 ntBASIC3.89□□□□□ -1.79
Trim54Q9ERP3 Gm25559-201ENSMUST00000157182 74 ntBASIC3.89□□□□□ -1.79
Trim54Q9ERP3 Gm25519-201ENSMUST00000158392 127 ntBASIC3.89□□□□□ -1.79
Trim54Q9ERP3 Gm27957-201ENSMUST00000184054 127 ntBASIC3.89□□□□□ -1.79
Trim54Q9ERP3 Gm28148-201ENSMUST00000186924 697 ntBASIC3.89□□□□□ -1.79
Trim54Q9ERP3 Gm28404-201ENSMUST00000190242 453 ntBASIC3.89□□□□□ -1.79
Trim54Q9ERP3 Gm18900-201ENSMUST00000193218 584 ntBASIC3.89□□□□□ -1.79
Trim54Q9ERP3 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.89□□□□□ -1.79
Trim54Q9ERP3 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
Trim54Q9ERP3 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Trim54Q9ERP3 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC3.89□□□□□ -1.79
Trim54Q9ERP3 Gm18113-201ENSMUST00000220630 303 ntBASIC3.89□□□□□ -1.79
Trim54Q9ERP3 CT010506.3-201ENSMUST00000223699 410 ntBASIC3.89□□□□□ -1.79
Trim54Q9ERP3 CT030135.1-201ENSMUST00000223760 570 ntBASIC3.89□□□□□ -1.79
Trim54Q9ERP3 Gm4894-201ENSMUST00000067007 357 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
Trim54Q9ERP3 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
Trim54Q9ERP3 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
Trim54Q9ERP3 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms