Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm23415-201ENSMUST00000175519 83 ntBASIC2.52□□□□□ -2.01
Lima1Q9ERG0 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Lima1Q9ERG0 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC2.52□□□□□ -2.01
Lima1Q9ERG0 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC2.52□□□□□ -2.01
Lima1Q9ERG0 Gm38214-201ENSMUST00000192581 988 ntBASIC2.52□□□□□ -2.01
Lima1Q9ERG0 Gm38018-201ENSMUST00000195651 540 ntBASIC2.52□□□□□ -2.01
Lima1Q9ERG0 Gm18340-201ENSMUST00000196342 609 ntBASIC2.52□□□□□ -2.01
Lima1Q9ERG0 Gm7443-201ENSMUST00000206355 378 ntBASIC2.52□□□□□ -2.01
Lima1Q9ERG0 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC2.52□□□□□ -2.01
Lima1Q9ERG0 Gm18704-201ENSMUST00000219736 446 ntBASIC2.52□□□□□ -2.01
Lima1Q9ERG0 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Lima1Q9ERG0 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Lima1Q9ERG0 Gm23096-201ENSMUST00000083447 107 ntBASIC2.52□□□□□ -2.01
Lima1Q9ERG0 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
Lima1Q9ERG0 AC164297.6-201ENSMUST00000224643 1568 ntBASIC2.52□□□□□ -2.01
Lima1Q9ERG0 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Lima1Q9ERG0 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Lima1Q9ERG0 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.51□□□□□ -2.01
Lima1Q9ERG0 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC2.51□□□□□ -2.01
Lima1Q9ERG0 Gm23128-201ENSMUST00000104257 132 ntBASIC2.51□□□□□ -2.01
Lima1Q9ERG0 Mir1193-201ENSMUST00000116761 121 ntBASIC2.51□□□□□ -2.01
Lima1Q9ERG0 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2.51□□□□□ -2.01
Lima1Q9ERG0 Gm12383-201ENSMUST00000120628 760 ntBASIC2.51□□□□□ -2.01
Lima1Q9ERG0 Gm14840-201ENSMUST00000122135 594 ntBASIC2.51□□□□□ -2.01
Lima1Q9ERG0 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC2.51□□□□□ -2.01
Lima1Q9ERG0 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Lima1Q9ERG0 Vmn1r160-201ENSMUST00000171745 924 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Lima1Q9ERG0 Gm23268-201ENSMUST00000175494 78 ntBASIC2.51□□□□□ -2.01
Lima1Q9ERG0 Gm20718-201ENSMUST00000176058 259 ntBASIC2.51□□□□□ -2.01
Lima1Q9ERG0 Gm22111-201ENSMUST00000178010 79 ntBASIC2.51□□□□□ -2.01
Lima1Q9ERG0 Gm23687-201ENSMUST00000178664 79 ntBASIC2.51□□□□□ -2.01
Lima1Q9ERG0 Gm24566-201ENSMUST00000179286 79 ntBASIC2.51□□□□□ -2.01
Lima1Q9ERG0 Gm23305-201ENSMUST00000179342 79 ntBASIC2.51□□□□□ -2.01
Lima1Q9ERG0 Gm26389-201ENSMUST00000179819 79 ntBASIC2.51□□□□□ -2.01
Lima1Q9ERG0 Gm22130-201ENSMUST00000179979 79 ntBASIC2.51□□□□□ -2.01
Lima1Q9ERG0 Gm22393-201ENSMUST00000180153 79 ntBASIC2.51□□□□□ -2.01
Lima1Q9ERG0 Gm25528-201ENSMUST00000180264 132 ntBASIC2.51□□□□□ -2.01
Lima1Q9ERG0 Gm25085-201ENSMUST00000180298 79 ntBASIC2.51□□□□□ -2.01
Lima1Q9ERG0 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
Lima1Q9ERG0 Olfr1055-202ENSMUST00000188023 939 ntBASIC2.51□□□□□ -2.01
Lima1Q9ERG0 Gm6060-201ENSMUST00000188671 251 ntBASIC2.51□□□□□ -2.01
Lima1Q9ERG0 Gm29740-201ENSMUST00000193182 655 ntBASIC2.51□□□□□ -2.01
Lima1Q9ERG0 Gm23128-202ENSMUST00000196578 133 ntBASIC2.51□□□□□ -2.01
Lima1Q9ERG0 Gm42474-201ENSMUST00000201073 505 ntBASIC2.51□□□□□ -2.01
Lima1Q9ERG0 Gm34314-201ENSMUST00000203622 367 ntBASIC2.51□□□□□ -2.01
Lima1Q9ERG0 Gm45048-201ENSMUST00000207058 429 ntBASIC2.51□□□□□ -2.01
Lima1Q9ERG0 Gm45687-201ENSMUST00000209454 155 ntBASIC2.51□□□□□ -2.01
Lima1Q9ERG0 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC2.51□□□□□ -2.01
Lima1Q9ERG0 Gm46234-201ENSMUST00000218702 259 ntBASIC2.51□□□□□ -2.01
Lima1Q9ERG0 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC2.51□□□□□ -2.01
Lima1Q9ERG0 AC159242.1-201ENSMUST00000225832 194 ntBASIC2.51□□□□□ -2.01
Lima1Q9ERG0 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.51□□□□□ -2.01
Lima1Q9ERG0 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC2.51□□□□□ -2.01
Lima1Q9ERG0 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC2.51□□□□□ -2.01
Lima1Q9ERG0 Gm43092-201ENSMUST00000202986 1854 ntBASIC2.51□□□□□ -2.01
Lima1Q9ERG0 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Lima1Q9ERG0 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Lima1Q9ERG0 Gm19074-201ENSMUST00000218915 1429 ntBASIC2.51□□□□□ -2.01
Lima1Q9ERG0 Gm45577-201ENSMUST00000210206 2287 ntBASIC2.51□□□□□ -2.01
Lima1Q9ERG0 Gm38278-201ENSMUST00000194715 1365 ntBASIC2.5□□□□□ -2.01
Lima1Q9ERG0 Gm9496-201ENSMUST00000191295 1601 ntBASIC2.5□□□□□ -2.01
Lima1Q9ERG0 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Lima1Q9ERG0 Mir599-201ENSMUST00000102378 88 ntBASIC2.5□□□□□ -2.01
Lima1Q9ERG0 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Lima1Q9ERG0 Scml1-201ENSMUST00000136860 576 ntTSL 3 BASIC2.5□□□□□ -2.01
Lima1Q9ERG0 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.5□□□□□ -2.01
Lima1Q9ERG0 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC2.5□□□□□ -2.01
Lima1Q9ERG0 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Lima1Q9ERG0 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC2.5□□□□□ -2.01
Lima1Q9ERG0 Gm37807-201ENSMUST00000194310 190 ntBASIC2.5□□□□□ -2.01
Lima1Q9ERG0 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC2.5□□□□□ -2.01
Lima1Q9ERG0 Gm45427-201ENSMUST00000209572 1253 ntBASIC2.5□□□□□ -2.01
Lima1Q9ERG0 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC2.5□□□□□ -2.01
Lima1Q9ERG0 CT030662.1-201ENSMUST00000227380 232 ntBASIC2.5□□□□□ -2.01
Lima1Q9ERG0 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.5□□□□□ -2.01
Lima1Q9ERG0 Tas2r139-201ENSMUST00000057686 960 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Lima1Q9ERG0 Gm25856-201ENSMUST00000082786 75 ntBASIC2.5□□□□□ -2.01
Lima1Q9ERG0 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
Lima1Q9ERG0 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
Lima1Q9ERG0 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Lima1Q9ERG0 AC115047.2-201ENSMUST00000214421 1848 ntBASIC2.49□□□□□ -2.01
Lima1Q9ERG0 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Lima1Q9ERG0 AC154511.1-201ENSMUST00000222578 1587 ntBASIC2.49□□□□□ -2.01
Lima1Q9ERG0 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.49□□□□□ -2.01
Lima1Q9ERG0 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.49□□□□□ -2.01
Lima1Q9ERG0 Gm11898-201ENSMUST00000117161 385 ntBASIC2.49□□□□□ -2.01
Lima1Q9ERG0 Mup-ps10-201ENSMUST00000119626 556 ntBASIC2.49□□□□□ -2.01
Lima1Q9ERG0 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC2.49□□□□□ -2.01
Lima1Q9ERG0 Gm14240-201ENSMUST00000120353 546 ntBASIC2.49□□□□□ -2.01
Lima1Q9ERG0 Mup-ps13-201ENSMUST00000120662 545 ntBASIC2.49□□□□□ -2.01
Lima1Q9ERG0 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC2.49□□□□□ -2.01
Lima1Q9ERG0 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC2.49□□□□□ -2.01
Lima1Q9ERG0 Gm26487-201ENSMUST00000158022 94 ntBASIC2.49□□□□□ -2.01
Lima1Q9ERG0 Gm17186-201ENSMUST00000171742 456 ntBASIC2.49□□□□□ -2.01
Lima1Q9ERG0 Mir6401-201ENSMUST00000184499 109 ntBASIC2.49□□□□□ -2.01
Lima1Q9ERG0 Gm37751-201ENSMUST00000192440 1198 ntBASIC2.49□□□□□ -2.01
Lima1Q9ERG0 Gm38076-201ENSMUST00000193889 450 ntBASIC2.49□□□□□ -2.01
Lima1Q9ERG0 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC2.49□□□□□ -2.01
Lima1Q9ERG0 Gm43722-201ENSMUST00000196054 124 ntBASIC2.49□□□□□ -2.01
Lima1Q9ERG0 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC2.49□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 130 ms