Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 Gm3657-201ENSMUST00000178170 639 ntBASIC2.56□□□□□ -2
Ccdc3Q9D6Y1 Gm7415-201ENSMUST00000178205 639 ntBASIC2.56□□□□□ -2
Ccdc3Q9D6Y1 Gm7398-201ENSMUST00000178589 639 ntBASIC2.56□□□□□ -2
Ccdc3Q9D6Y1 Gm7391-201ENSMUST00000178680 639 ntBASIC2.56□□□□□ -2
Ccdc3Q9D6Y1 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Ccdc3Q9D6Y1 Gm7375-201ENSMUST00000179232 639 ntBASIC2.56□□□□□ -2
Ccdc3Q9D6Y1 Gm3681-201ENSMUST00000179940 639 ntBASIC2.56□□□□□ -2
Ccdc3Q9D6Y1 Gm18727-201ENSMUST00000185981 553 ntBASIC2.56□□□□□ -2
Ccdc3Q9D6Y1 Gm29553-201ENSMUST00000189692 279 ntBASIC2.56□□□□□ -2
Ccdc3Q9D6Y1 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC2.56□□□□□ -2
Ccdc3Q9D6Y1 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC2.56□□□□□ -2
Ccdc3Q9D6Y1 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC2.56□□□□□ -2
Ccdc3Q9D6Y1 AC160114.1-201ENSMUST00000221930 365 ntBASIC2.56□□□□□ -2
Ccdc3Q9D6Y1 AC154224.1-201ENSMUST00000224367 403 ntBASIC2.56□□□□□ -2
Ccdc3Q9D6Y1 AC107663.3-201ENSMUST00000225873 601 ntBASIC2.56□□□□□ -2
Ccdc3Q9D6Y1 AC116656.1-201ENSMUST00000227040 755 ntBASIC2.56□□□□□ -2
Ccdc3Q9D6Y1 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC2.56□□□□□ -2
Ccdc3Q9D6Y1 Gm23264-201ENSMUST00000083372 107 ntBASIC2.56□□□□□ -2
Ccdc3Q9D6Y1 Gm44789-201ENSMUST00000207195 3101 ntBASIC2.56□□□□□ -2
Ccdc3Q9D6Y1 Zfp953-201ENSMUST00000081582 4677 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
Ccdc3Q9D6Y1 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC2.55□□□□□ -2
Ccdc3Q9D6Y1 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Ccdc3Q9D6Y1 Gm25529-201ENSMUST00000104850 92 ntBASIC2.55□□□□□ -2
Ccdc3Q9D6Y1 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC2.55□□□□□ -2
Ccdc3Q9D6Y1 Gm8569-201ENSMUST00000117630 647 ntBASIC2.55□□□□□ -2
Ccdc3Q9D6Y1 Gm12492-201ENSMUST00000117665 564 ntBASIC2.55□□□□□ -2
Ccdc3Q9D6Y1 Gm13678-201ENSMUST00000118926 340 ntBASIC2.55□□□□□ -2
Ccdc3Q9D6Y1 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC2.55□□□□□ -2
Ccdc3Q9D6Y1 Gm11819-201ENSMUST00000122192 372 ntBASIC2.55□□□□□ -2
Ccdc3Q9D6Y1 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC2.55□□□□□ -2
Ccdc3Q9D6Y1 Gm16533-201ENSMUST00000140035 228 ntBASIC2.55□□□□□ -2
Ccdc3Q9D6Y1 Gm22651-201ENSMUST00000157872 94 ntBASIC2.55□□□□□ -2
Ccdc3Q9D6Y1 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.55□□□□□ -2
Ccdc3Q9D6Y1 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC2.55□□□□□ -2
Ccdc3Q9D6Y1 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC2.55□□□□□ -2
Ccdc3Q9D6Y1 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Ccdc3Q9D6Y1 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Ccdc3Q9D6Y1 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Ccdc3Q9D6Y1 Gm20811-201ENSMUST00000190500 553 ntBASIC2.55□□□□□ -2
Ccdc3Q9D6Y1 Gm37296-201ENSMUST00000192728 2922 ntBASIC2.55□□□□□ -2
Ccdc3Q9D6Y1 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.55□□□□□ -2
Ccdc3Q9D6Y1 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Ccdc3Q9D6Y1 Gm45013-201ENSMUST00000206883 178 ntBASIC2.55□□□□□ -2
Ccdc3Q9D6Y1 Gm45577-201ENSMUST00000210206 2287 ntBASIC2.55□□□□□ -2
Ccdc3Q9D6Y1 Gm18346-201ENSMUST00000216782 325 ntBASIC2.55□□□□□ -2
Ccdc3Q9D6Y1 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
Ccdc3Q9D6Y1 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
Ccdc3Q9D6Y1 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC2.55□□□□□ -2
Ccdc3Q9D6Y1 CT025538.3-201ENSMUST00000225279 3848 ntBASIC2.55□□□□□ -2
Ccdc3Q9D6Y1 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Ccdc3Q9D6Y1 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Ccdc3Q9D6Y1 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.55□□□□□ -2
Ccdc3Q9D6Y1 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Ccdc3Q9D6Y1 Gm16436-201ENSMUST00000121510 1607 ntBASIC2.54□□□□□ -2
Ccdc3Q9D6Y1 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC2.54□□□□□ -2
Ccdc3Q9D6Y1 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Ccdc3Q9D6Y1 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.54□□□□□ -2
Ccdc3Q9D6Y1 Gm25485-201ENSMUST00000104120 132 ntBASIC2.54□□□□□ -2
Ccdc3Q9D6Y1 Gm16017-201ENSMUST00000119834 208 ntBASIC2.54□□□□□ -2
Ccdc3Q9D6Y1 Gm13676-201ENSMUST00000122185 591 ntBASIC2.54□□□□□ -2
Ccdc3Q9D6Y1 Gm3104-201ENSMUST00000171004 473 ntBASIC2.54□□□□□ -2
Ccdc3Q9D6Y1 Gm23053-201ENSMUST00000175136 96 ntBASIC2.54□□□□□ -2
Ccdc3Q9D6Y1 Gm24082-201ENSMUST00000175175 83 ntBASIC2.54□□□□□ -2
Ccdc3Q9D6Y1 Mir6386-201ENSMUST00000183558 104 ntBASIC2.54□□□□□ -2
Ccdc3Q9D6Y1 Gm10925-201ENSMUST00000189941 678 ntBASIC2.54□□□□□ -2
Ccdc3Q9D6Y1 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC2.54□□□□□ -2
Ccdc3Q9D6Y1 Gm37281-201ENSMUST00000192412 439 ntBASIC2.54□□□□□ -2
Ccdc3Q9D6Y1 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC2.54□□□□□ -2
Ccdc3Q9D6Y1 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC2.54□□□□□ -2
Ccdc3Q9D6Y1 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC2.54□□□□□ -2
Ccdc3Q9D6Y1 Gm18855-201ENSMUST00000206689 570 ntBASIC2.54□□□□□ -2
Ccdc3Q9D6Y1 Gm44849-201ENSMUST00000207595 484 ntBASIC2.54□□□□□ -2
Ccdc3Q9D6Y1 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.54□□□□□ -2
Ccdc3Q9D6Y1 AC151843.1-201ENSMUST00000215960 691 ntBASIC2.54□□□□□ -2
Ccdc3Q9D6Y1 Gm18043-201ENSMUST00000216741 739 ntBASIC2.54□□□□□ -2
Ccdc3Q9D6Y1 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC2.54□□□□□ -2
Ccdc3Q9D6Y1 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC2.54□□□□□ -2
Ccdc3Q9D6Y1 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC2.54□□□□□ -2
Ccdc3Q9D6Y1 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Ccdc3Q9D6Y1 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC2.54□□□□□ -2
Ccdc3Q9D6Y1 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.54□□□□□ -2
Ccdc3Q9D6Y1 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC2.54□□□□□ -2
Ccdc3Q9D6Y1 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC2.53□□□□□ -2
Ccdc3Q9D6Y1 Gm11285-201ENSMUST00000118443 322 ntBASIC2.53□□□□□ -2
Ccdc3Q9D6Y1 Gm25883-201ENSMUST00000157781 271 ntBASIC2.53□□□□□ -2
Ccdc3Q9D6Y1 Gm26406-201ENSMUST00000158503 124 ntBASIC2.53□□□□□ -2
Ccdc3Q9D6Y1 Gm22666-201ENSMUST00000158717 164 ntBASIC2.53□□□□□ -2
Ccdc3Q9D6Y1 Gm22693-201ENSMUST00000175049 442 ntBASIC2.53□□□□□ -2
Ccdc3Q9D6Y1 Gm25476-201ENSMUST00000175125 185 ntBASIC2.53□□□□□ -2
Ccdc3Q9D6Y1 Mir3075-201ENSMUST00000175340 85 ntBASIC2.53□□□□□ -2
Ccdc3Q9D6Y1 Gm24417-201ENSMUST00000178123 79 ntBASIC2.53□□□□□ -2
Ccdc3Q9D6Y1 Gm24653-201ENSMUST00000178541 79 ntBASIC2.53□□□□□ -2
Ccdc3Q9D6Y1 Gm25934-201ENSMUST00000178642 79 ntBASIC2.53□□□□□ -2
Ccdc3Q9D6Y1 Gm19257-201ENSMUST00000186121 183 ntBASIC2.53□□□□□ -2
Ccdc3Q9D6Y1 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC2.53□□□□□ -2
Ccdc3Q9D6Y1 Gm44274-201ENSMUST00000203417 256 ntBASIC2.53□□□□□ -2
Ccdc3Q9D6Y1 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC2.53□□□□□ -2
Ccdc3Q9D6Y1 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC2.53□□□□□ -2
Ccdc3Q9D6Y1 Gm6796-201ENSMUST00000211919 243 ntBASIC2.53□□□□□ -2
Ccdc3Q9D6Y1 AC145736.1-201ENSMUST00000214661 479 ntBASIC2.53□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms