Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Vps28Q9D1C8 Gm26189-201ENSMUST00000179879 107 ntBASIC3.58□□□□□ -1.84
Vps28Q9D1C8 Gm14596-201ENSMUST00000180268 537 ntBASIC3.58□□□□□ -1.84
Vps28Q9D1C8 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Vps28Q9D1C8 Gm14595-201ENSMUST00000180335 537 ntBASIC3.58□□□□□ -1.84
Vps28Q9D1C8 Gm28146-201ENSMUST00000185517 701 ntBASIC3.58□□□□□ -1.84
Vps28Q9D1C8 Gm28113-201ENSMUST00000188280 229 ntBASIC3.58□□□□□ -1.84
Vps28Q9D1C8 Gm28954-201ENSMUST00000190031 437 ntTSL 5 BASIC3.58□□□□□ -1.84
Vps28Q9D1C8 Gm31942-202ENSMUST00000195375 437 ntTSL 5 BASIC3.58□□□□□ -1.84
Vps28Q9D1C8 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Vps28Q9D1C8 Gm44990-201ENSMUST00000203922 217 ntBASIC3.58□□□□□ -1.84
Vps28Q9D1C8 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC3.58□□□□□ -1.84
Vps28Q9D1C8 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Vps28Q9D1C8 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Vps28Q9D1C8 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.58□□□□□ -1.84
Vps28Q9D1C8 Gm21007-201ENSMUST00000221024 326 ntBASIC3.58□□□□□ -1.84
Vps28Q9D1C8 AC156560.1-201ENSMUST00000221425 256 ntBASIC3.58□□□□□ -1.84
Vps28Q9D1C8 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Vps28Q9D1C8 AC165146.1-201ENSMUST00000223777 900 ntBASIC3.58□□□□□ -1.84
Vps28Q9D1C8 AC098719.1-201ENSMUST00000228920 371 ntBASIC3.58□□□□□ -1.84
Vps28Q9D1C8 Ly96-201ENSMUST00000026881 632 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Vps28Q9D1C8 Tas2r118-201ENSMUST00000062463 900 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Vps28Q9D1C8 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
Vps28Q9D1C8 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Vps28Q9D1C8 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.57□□□□□ -1.84
Vps28Q9D1C8 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.57□□□□□ -1.84
Vps28Q9D1C8 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Vps28Q9D1C8 Gm13349-201ENSMUST00000118436 411 ntBASIC3.57□□□□□ -1.84
Vps28Q9D1C8 Gm11352-201ENSMUST00000119264 517 ntBASIC3.57□□□□□ -1.84
Vps28Q9D1C8 Gm13482-201ENSMUST00000119842 254 ntBASIC3.57□□□□□ -1.84
Vps28Q9D1C8 Gm12825-201ENSMUST00000120249 563 ntBASIC3.57□□□□□ -1.84
Vps28Q9D1C8 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC3.57□□□□□ -1.84
Vps28Q9D1C8 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC3.57□□□□□ -1.84
Vps28Q9D1C8 Gm22034-201ENSMUST00000157283 134 ntBASIC3.57□□□□□ -1.84
Vps28Q9D1C8 Gm22380-201ENSMUST00000157479 95 ntBASIC3.57□□□□□ -1.84
Vps28Q9D1C8 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.57□□□□□ -1.84
Vps28Q9D1C8 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Vps28Q9D1C8 Gm9593-201ENSMUST00000166034 469 ntBASIC3.57□□□□□ -1.84
Vps28Q9D1C8 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Vps28Q9D1C8 Mir6408-201ENSMUST00000183643 91 ntBASIC3.57□□□□□ -1.84
Vps28Q9D1C8 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC3.57□□□□□ -1.84
Vps28Q9D1C8 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.57□□□□□ -1.84
Vps28Q9D1C8 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
Vps28Q9D1C8 Gm29192-201ENSMUST00000190942 377 ntBASIC3.57□□□□□ -1.84
Vps28Q9D1C8 Gm44295-201ENSMUST00000203805 437 ntBASIC3.57□□□□□ -1.84
Vps28Q9D1C8 Gm45049-201ENSMUST00000207586 591 ntBASIC3.57□□□□□ -1.84
Vps28Q9D1C8 Gm45588-201ENSMUST00000211213 630 ntBASIC3.57□□□□□ -1.84
Vps28Q9D1C8 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
Vps28Q9D1C8 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
Vps28Q9D1C8 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Vps28Q9D1C8 Olfr946-ps1-201ENSMUST00000217547 341 ntBASIC3.57□□□□□ -1.84
Vps28Q9D1C8 AC134537.3-201ENSMUST00000220154 503 ntTSL 3 BASIC3.57□□□□□ -1.84
Vps28Q9D1C8 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC3.57□□□□□ -1.84
Vps28Q9D1C8 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.57□□□□□ -1.84
Vps28Q9D1C8 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Vps28Q9D1C8 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Vps28Q9D1C8 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC3.57□□□□□ -1.84
Vps28Q9D1C8 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Vps28Q9D1C8 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Vps28Q9D1C8 Mir21a-201ENSMUST00000083521 92 ntBASIC3.57□□□□□ -1.84
Vps28Q9D1C8 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
Vps28Q9D1C8 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Vps28Q9D1C8 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Vps28Q9D1C8 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Vps28Q9D1C8 Gm26145-201ENSMUST00000104476 127 ntBASIC3.56□□□□□ -1.84
Vps28Q9D1C8 Gm14811-201ENSMUST00000117070 117 ntBASIC3.56□□□□□ -1.84
Vps28Q9D1C8 Gm12393-201ENSMUST00000117084 848 ntBASIC3.56□□□□□ -1.84
Vps28Q9D1C8 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC3.56□□□□□ -1.84
Vps28Q9D1C8 Gm12693-201ENSMUST00000121965 483 ntBASIC3.56□□□□□ -1.84
Vps28Q9D1C8 Gm15878-201ENSMUST00000127561 306 ntBASIC3.56□□□□□ -1.84
Vps28Q9D1C8 Gm22236-201ENSMUST00000157093 106 ntBASIC3.56□□□□□ -1.84
Vps28Q9D1C8 Gm23326-201ENSMUST00000157419 105 ntBASIC3.56□□□□□ -1.84
Vps28Q9D1C8 Gm24008-201ENSMUST00000157733 138 ntBASIC3.56□□□□□ -1.84
Vps28Q9D1C8 Gm23775-201ENSMUST00000158991 249 ntBASIC3.56□□□□□ -1.84
Vps28Q9D1C8 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Vps28Q9D1C8 Gm24100-201ENSMUST00000178592 79 ntBASIC3.56□□□□□ -1.84
Vps28Q9D1C8 Gm27755-201ENSMUST00000184623 132 ntBASIC3.56□□□□□ -1.84
Vps28Q9D1C8 Gm6445-201ENSMUST00000189515 1112 ntBASIC3.56□□□□□ -1.84
Vps28Q9D1C8 Gm36966-201ENSMUST00000192217 413 ntBASIC3.56□□□□□ -1.84
Vps28Q9D1C8 Gm8242-202ENSMUST00000193056 475 ntBASIC3.56□□□□□ -1.84
Vps28Q9D1C8 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
Vps28Q9D1C8 Gm43039-201ENSMUST00000202883 963 ntBASIC3.56□□□□□ -1.84
Vps28Q9D1C8 Gm44016-201ENSMUST00000203463 164 ntBASIC3.56□□□□□ -1.84
Vps28Q9D1C8 Gm45226-201ENSMUST00000206602 288 ntBASIC3.56□□□□□ -1.84
Vps28Q9D1C8 AC140785.1-201ENSMUST00000217782 383 ntBASIC3.56□□□□□ -1.84
Vps28Q9D1C8 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC3.56□□□□□ -1.84
Vps28Q9D1C8 Gm2710-201ENSMUST00000073196 603 ntBASIC3.56□□□□□ -1.84
Vps28Q9D1C8 n-R5s166-201ENSMUST00000082898 121 ntBASIC3.56□□□□□ -1.84
Vps28Q9D1C8 Snora70-201ENSMUST00000083047 137 ntBASIC3.56□□□□□ -1.84
Vps28Q9D1C8 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Vps28Q9D1C8 Olfr1434-201ENSMUST00000207186 2714 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
Vps28Q9D1C8 Gm15902-202ENSMUST00000219623 3477 ntBASIC3.56□□□□□ -1.84
Vps28Q9D1C8 Gm21032-201ENSMUST00000208108 2578 ntBASIC3.56□□□□□ -1.84
Vps28Q9D1C8 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
Vps28Q9D1C8 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Vps28Q9D1C8 Cp-204ENSMUST00000108328 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Vps28Q9D1C8 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Vps28Q9D1C8 Gm26384-201ENSMUST00000102183 110 ntBASIC3.55□□□□□ -1.84
Vps28Q9D1C8 Gm23530-201ENSMUST00000104564 137 ntBASIC3.55□□□□□ -1.84
Vps28Q9D1C8 Gm23532-201ENSMUST00000104569 112 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 98.4 ms