Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm9498-201ENSMUST00000140849 291 ntBASIC3.29□□□□□ -1.88
Ddx28Q9CWT6 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC3.29□□□□□ -1.88
Ddx28Q9CWT6 Gm24998-201ENSMUST00000157908 89 ntBASIC3.29□□□□□ -1.88
Ddx28Q9CWT6 Gm24666-201ENSMUST00000158937 167 ntBASIC3.29□□□□□ -1.88
Ddx28Q9CWT6 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Ddx28Q9CWT6 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC3.29□□□□□ -1.88
Ddx28Q9CWT6 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.29□□□□□ -1.88
Ddx28Q9CWT6 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC3.29□□□□□ -1.88
Ddx28Q9CWT6 Mir6382-201ENSMUST00000184055 110 ntBASIC3.29□□□□□ -1.88
Ddx28Q9CWT6 Gm28283-201ENSMUST00000185509 178 ntBASIC3.29□□□□□ -1.88
Ddx28Q9CWT6 Gm36934-201ENSMUST00000192007 306 ntBASIC3.29□□□□□ -1.88
Ddx28Q9CWT6 Ranbp2-ps12-201ENSMUST00000197110 386 ntBASIC3.29□□□□□ -1.88
Ddx28Q9CWT6 Gm18429-201ENSMUST00000198707 421 ntBASIC3.29□□□□□ -1.88
Ddx28Q9CWT6 Gm43513-201ENSMUST00000199779 1076 ntBASIC3.29□□□□□ -1.88
Ddx28Q9CWT6 Gm43224-201ENSMUST00000201567 898 ntBASIC3.29□□□□□ -1.88
Ddx28Q9CWT6 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Ddx28Q9CWT6 Gm7984-201ENSMUST00000060640 538 ntBASIC3.29□□□□□ -1.88
Ddx28Q9CWT6 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC3.29□□□□□ -1.88
Ddx28Q9CWT6 n-R5s37-201ENSMUST00000082533 118 ntBASIC3.29□□□□□ -1.88
Ddx28Q9CWT6 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Ddx28Q9CWT6 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Ddx28Q9CWT6 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
Ddx28Q9CWT6 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.29□□□□□ -1.88
Ddx28Q9CWT6 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC3.29□□□□□ -1.88
Ddx28Q9CWT6 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.29□□□□□ -1.88
Ddx28Q9CWT6 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Ddx28Q9CWT6 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Ddx28Q9CWT6 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC3.28□□□□□ -1.88
Ddx28Q9CWT6 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC3.28□□□□□ -1.88
Ddx28Q9CWT6 Gm18594-201ENSMUST00000175733 1403 ntBASIC3.28□□□□□ -1.88
Ddx28Q9CWT6 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Ddx28Q9CWT6 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.28□□□□□ -1.88
Ddx28Q9CWT6 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Ddx28Q9CWT6 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Ddx28Q9CWT6 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Ddx28Q9CWT6 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Ddx28Q9CWT6 Gm12149-201ENSMUST00000117511 654 ntBASIC3.28□□□□□ -1.88
Ddx28Q9CWT6 Gm14570-201ENSMUST00000119444 391 ntBASIC3.28□□□□□ -1.88
Ddx28Q9CWT6 Gm14881-201ENSMUST00000120366 372 ntBASIC3.28□□□□□ -1.88
Ddx28Q9CWT6 Gm12858-201ENSMUST00000121913 208 ntBASIC3.28□□□□□ -1.88
Ddx28Q9CWT6 n-R5s192-201ENSMUST00000122577 119 ntBASIC3.28□□□□□ -1.88
Ddx28Q9CWT6 Gm23183-201ENSMUST00000122595 323 ntBASIC3.28□□□□□ -1.88
Ddx28Q9CWT6 Gm23887-201ENSMUST00000122683 172 ntBASIC3.28□□□□□ -1.88
Ddx28Q9CWT6 Gm23206-201ENSMUST00000122720 184 ntBASIC3.28□□□□□ -1.88
Ddx28Q9CWT6 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC3.28□□□□□ -1.88
Ddx28Q9CWT6 Gm24505-201ENSMUST00000157682 126 ntBASIC3.28□□□□□ -1.88
Ddx28Q9CWT6 Gm22840-201ENSMUST00000158444 136 ntBASIC3.28□□□□□ -1.88
Ddx28Q9CWT6 Gm20399-201ENSMUST00000174652 132 ntBASIC3.28□□□□□ -1.88
Ddx28Q9CWT6 Ang-ps2-201ENSMUST00000178173 433 ntBASIC3.28□□□□□ -1.88
Ddx28Q9CWT6 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Ddx28Q9CWT6 Mir496b-201ENSMUST00000184935 113 ntBASIC3.28□□□□□ -1.88
Ddx28Q9CWT6 Gm6651-201ENSMUST00000189471 271 ntBASIC3.28□□□□□ -1.88
Ddx28Q9CWT6 Gm29107-201ENSMUST00000190910 347 ntBASIC3.28□□□□□ -1.88
Ddx28Q9CWT6 Trbv22-201ENSMUST00000191697 291 ntBASIC3.28□□□□□ -1.88
Ddx28Q9CWT6 Gm37692-201ENSMUST00000192633 232 ntBASIC3.28□□□□□ -1.88
Ddx28Q9CWT6 Gm18956-201ENSMUST00000192857 480 ntBASIC3.28□□□□□ -1.88
Ddx28Q9CWT6 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.28□□□□□ -1.88
Ddx28Q9CWT6 Gm44295-201ENSMUST00000203805 437 ntBASIC3.28□□□□□ -1.88
Ddx28Q9CWT6 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC3.28□□□□□ -1.88
Ddx28Q9CWT6 Gm35876-201ENSMUST00000205044 459 ntBASIC3.28□□□□□ -1.88
Ddx28Q9CWT6 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC3.28□□□□□ -1.88
Ddx28Q9CWT6 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC3.28□□□□□ -1.88
Ddx28Q9CWT6 Gm5175-202ENSMUST00000219699 529 ntBASIC3.28□□□□□ -1.88
Ddx28Q9CWT6 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC3.28□□□□□ -1.88
Ddx28Q9CWT6 AC166369.1-201ENSMUST00000228126 351 ntBASIC3.28□□□□□ -1.88
Ddx28Q9CWT6 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Ddx28Q9CWT6 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Ddx28Q9CWT6 Olfr1161-201ENSMUST00000054845 1012 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Ddx28Q9CWT6 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Ddx28Q9CWT6 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Ddx28Q9CWT6 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Ddx28Q9CWT6 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Ddx28Q9CWT6 Gm28360-201ENSMUST00000187455 1491 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Ddx28Q9CWT6 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
Ddx28Q9CWT6 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Ddx28Q9CWT6 Gm26075-201ENSMUST00000104062 121 ntBASIC3.27□□□□□ -1.89
Ddx28Q9CWT6 Gm25833-201ENSMUST00000104137 133 ntBASIC3.27□□□□□ -1.89
Ddx28Q9CWT6 Gm22771-201ENSMUST00000104449 91 ntBASIC3.27□□□□□ -1.89
Ddx28Q9CWT6 Gm3940-201ENSMUST00000105087 432 ntBASIC3.27□□□□□ -1.89
Ddx28Q9CWT6 Gm14537-201ENSMUST00000117464 599 ntBASIC3.27□□□□□ -1.89
Ddx28Q9CWT6 Defa-ps9-201ENSMUST00000118264 276 ntBASIC3.27□□□□□ -1.89
Ddx28Q9CWT6 Gm12335-201ENSMUST00000119738 327 ntBASIC3.27□□□□□ -1.89
Ddx28Q9CWT6 Gm13602-201ENSMUST00000122405 493 ntBASIC3.27□□□□□ -1.89
Ddx28Q9CWT6 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC3.27□□□□□ -1.89
Ddx28Q9CWT6 Gm25706-201ENSMUST00000157828 247 ntBASIC3.27□□□□□ -1.89
Ddx28Q9CWT6 Gm17119-201ENSMUST00000163943 280 ntBASIC3.27□□□□□ -1.89
Ddx28Q9CWT6 Gm22716-201ENSMUST00000177596 107 ntBASIC3.27□□□□□ -1.89
Ddx28Q9CWT6 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC3.27□□□□□ -1.89
Ddx28Q9CWT6 Gm27163-201ENSMUST00000184767 409 ntBASIC3.27□□□□□ -1.89
Ddx28Q9CWT6 Gm27919-201ENSMUST00000185163 107 ntBASIC3.27□□□□□ -1.89
Ddx28Q9CWT6 Scgb2b6-201ENSMUST00000188132 330 ntBASIC3.27□□□□□ -1.89
Ddx28Q9CWT6 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Ddx28Q9CWT6 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Ddx28Q9CWT6 Gm42924-201ENSMUST00000197261 185 ntBASIC3.27□□□□□ -1.89
Ddx28Q9CWT6 Gm44864-201ENSMUST00000207292 505 ntTSL 2 BASIC3.27□□□□□ -1.89
Ddx28Q9CWT6 Gm19126-201ENSMUST00000207896 509 ntBASIC3.27□□□□□ -1.89
Ddx28Q9CWT6 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
Ddx28Q9CWT6 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Ddx28Q9CWT6 AC153506.2-201ENSMUST00000218051 257 ntBASIC3.27□□□□□ -1.89
Ddx28Q9CWT6 CT572983.1-201ENSMUST00000226895 514 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms