Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm18956-201ENSMUST00000192857 480 ntBASIC3.44□□□□□ -1.86
Smc1aQ9CU62 Gm43493-201ENSMUST00000199837 202 ntBASIC3.44□□□□□ -1.86
Smc1aQ9CU62 Gm45513-201ENSMUST00000210228 376 ntBASIC3.44□□□□□ -1.86
Smc1aQ9CU62 Gm45551-201ENSMUST00000211459 928 ntBASIC3.44□□□□□ -1.86
Smc1aQ9CU62 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Smc1aQ9CU62 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC3.44□□□□□ -1.86
Smc1aQ9CU62 AC140785.1-201ENSMUST00000217782 383 ntBASIC3.44□□□□□ -1.86
Smc1aQ9CU62 Gm46233-201ENSMUST00000217831 449 ntBASIC3.44□□□□□ -1.86
Smc1aQ9CU62 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC3.44□□□□□ -1.86
Smc1aQ9CU62 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Smc1aQ9CU62 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Smc1aQ9CU62 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Smc1aQ9CU62 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC3.44□□□□□ -1.86
Smc1aQ9CU62 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Smc1aQ9CU62 Gm37515-201ENSMUST00000193321 3817 ntBASIC3.44□□□□□ -1.86
Smc1aQ9CU62 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC3.44□□□□□ -1.86
Smc1aQ9CU62 Gm43032-201ENSMUST00000197967 3123 ntBASIC3.44□□□□□ -1.86
Smc1aQ9CU62 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Smc1aQ9CU62 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Smc1aQ9CU62 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Smc1aQ9CU62 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Smc1aQ9CU62 AC115047.2-201ENSMUST00000214421 1848 ntBASIC3.43□□□□□ -1.86
Smc1aQ9CU62 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
Smc1aQ9CU62 Gm14931-201ENSMUST00000111079 253 ntBASIC3.43□□□□□ -1.86
Smc1aQ9CU62 Gm7429-201ENSMUST00000118664 348 ntBASIC3.43□□□□□ -1.86
Smc1aQ9CU62 Gm11356-201ENSMUST00000118974 192 ntBASIC3.43□□□□□ -1.86
Smc1aQ9CU62 Gm14989-201ENSMUST00000120497 207 ntBASIC3.43□□□□□ -1.86
Smc1aQ9CU62 Gm13210-201ENSMUST00000121483 273 ntBASIC3.43□□□□□ -1.86
Smc1aQ9CU62 Gm15065-201ENSMUST00000121699 273 ntBASIC3.43□□□□□ -1.86
Smc1aQ9CU62 Gm14129-201ENSMUST00000122436 291 ntBASIC3.43□□□□□ -1.86
Smc1aQ9CU62 Gm23380-201ENSMUST00000158448 103 ntBASIC3.43□□□□□ -1.86
Smc1aQ9CU62 Gm23473-201ENSMUST00000158883 116 ntBASIC3.43□□□□□ -1.86
Smc1aQ9CU62 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC3.43□□□□□ -1.86
Smc1aQ9CU62 Gm27796-201ENSMUST00000183863 261 ntBASIC3.43□□□□□ -1.86
Smc1aQ9CU62 Gm27161-201ENSMUST00000183960 562 ntBASIC3.43□□□□□ -1.86
Smc1aQ9CU62 Gm29259-201ENSMUST00000186396 694 ntBASIC3.43□□□□□ -1.86
Smc1aQ9CU62 Gm28113-201ENSMUST00000188280 229 ntBASIC3.43□□□□□ -1.86
Smc1aQ9CU62 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
Smc1aQ9CU62 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC3.43□□□□□ -1.86
Smc1aQ9CU62 Gm6012-201ENSMUST00000210821 730 ntBASIC3.43□□□□□ -1.86
Smc1aQ9CU62 Olfr1324-203ENSMUST00000219631 1152 ntAPPRIS P2 BASIC3.43□□□□□ -1.86
Smc1aQ9CU62 AC153924.1-201ENSMUST00000220117 312 ntBASIC3.43□□□□□ -1.86
Smc1aQ9CU62 AC154636.3-201ENSMUST00000221489 1214 ntBASIC3.43□□□□□ -1.86
Smc1aQ9CU62 AC174797.4-201ENSMUST00000225510 347 ntBASIC3.43□□□□□ -1.86
Smc1aQ9CU62 AC118639.1-204ENSMUST00000226401 694 ntBASIC3.43□□□□□ -1.86
Smc1aQ9CU62 CT030684.2-201ENSMUST00000228946 826 ntBASIC3.43□□□□□ -1.86
Smc1aQ9CU62 Olfr1324-201ENSMUST00000050044 1152 ntAPPRIS ALT2 BASIC3.43□□□□□ -1.86
Smc1aQ9CU62 Gm6369-201ENSMUST00000069626 412 ntBASIC3.43□□□□□ -1.86
Smc1aQ9CU62 Gm22249-201ENSMUST00000082485 136 ntBASIC3.43□□□□□ -1.86
Smc1aQ9CU62 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
Smc1aQ9CU62 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.43□□□□□ -1.86
Smc1aQ9CU62 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Smc1aQ9CU62 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Smc1aQ9CU62 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
Smc1aQ9CU62 Gm9496-201ENSMUST00000191295 1601 ntBASIC3.42□□□□□ -1.86
Smc1aQ9CU62 Gm23577-201ENSMUST00000103950 110 ntBASIC3.42□□□□□ -1.86
Smc1aQ9CU62 Gm22939-201ENSMUST00000103958 131 ntBASIC3.42□□□□□ -1.86
Smc1aQ9CU62 Gm12954-201ENSMUST00000118610 611 ntBASIC3.42□□□□□ -1.86
Smc1aQ9CU62 Gm9119-201ENSMUST00000118866 495 ntBASIC3.42□□□□□ -1.86
Smc1aQ9CU62 Gm16274-201ENSMUST00000139251 592 ntBASIC3.42□□□□□ -1.86
Smc1aQ9CU62 Gm13194-201ENSMUST00000142299 311 ntBASIC3.42□□□□□ -1.86
Smc1aQ9CU62 Gm22961-201ENSMUST00000157964 106 ntBASIC3.42□□□□□ -1.86
Smc1aQ9CU62 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Smc1aQ9CU62 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC3.42□□□□□ -1.86
Smc1aQ9CU62 Gm27698-201ENSMUST00000184060 249 ntBASIC3.42□□□□□ -1.86
Smc1aQ9CU62 Mir6383-201ENSMUST00000184545 116 ntBASIC3.42□□□□□ -1.86
Smc1aQ9CU62 Gm29013-201ENSMUST00000187431 237 ntBASIC3.42□□□□□ -1.86
Smc1aQ9CU62 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC3.42□□□□□ -1.86
Smc1aQ9CU62 Gm38231-201ENSMUST00000192030 347 ntBASIC3.42□□□□□ -1.86
Smc1aQ9CU62 Gm6140-201ENSMUST00000192494 966 ntBASIC3.42□□□□□ -1.86
Smc1aQ9CU62 Gm38213-201ENSMUST00000193203 173 ntBASIC3.42□□□□□ -1.86
Smc1aQ9CU62 Gm37732-201ENSMUST00000194377 316 ntBASIC3.42□□□□□ -1.86
Smc1aQ9CU62 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC3.42□□□□□ -1.86
Smc1aQ9CU62 Gm42828-201ENSMUST00000199669 469 ntBASIC3.42□□□□□ -1.86
Smc1aQ9CU62 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC3.42□□□□□ -1.86
Smc1aQ9CU62 Gm34811-201ENSMUST00000206580 445 ntTSL 3 BASIC3.42□□□□□ -1.86
Smc1aQ9CU62 4930558N11Rik-204ENSMUST00000211512 516 ntTSL 3 BASIC3.42□□□□□ -1.86
Smc1aQ9CU62 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Smc1aQ9CU62 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
Smc1aQ9CU62 Gm22979-201ENSMUST00000082609 159 ntBASIC3.42□□□□□ -1.86
Smc1aQ9CU62 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Smc1aQ9CU62 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Smc1aQ9CU62 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Smc1aQ9CU62 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
Smc1aQ9CU62 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Smc1aQ9CU62 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.41□□□□□ -1.86
Smc1aQ9CU62 Gm13761-201ENSMUST00000117238 807 ntBASIC3.41□□□□□ -1.86
Smc1aQ9CU62 Gm13504-201ENSMUST00000117490 316 ntBASIC3.41□□□□□ -1.86
Smc1aQ9CU62 Gm14971-201ENSMUST00000117980 663 ntBASIC3.41□□□□□ -1.86
Smc1aQ9CU62 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC3.41□□□□□ -1.86
Smc1aQ9CU62 Gm14566-201ENSMUST00000118915 321 ntBASIC3.41□□□□□ -1.86
Smc1aQ9CU62 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Smc1aQ9CU62 Gm13059-201ENSMUST00000119881 398 ntBASIC3.41□□□□□ -1.86
Smc1aQ9CU62 Gm14913-201ENSMUST00000120011 1093 ntBASIC3.41□□□□□ -1.86
Smc1aQ9CU62 Gm11414-201ENSMUST00000121795 263 ntBASIC3.41□□□□□ -1.86
Smc1aQ9CU62 Gm24787-201ENSMUST00000157380 123 ntBASIC3.41□□□□□ -1.86
Smc1aQ9CU62 Gm24190-201ENSMUST00000157976 216 ntBASIC3.41□□□□□ -1.86
Smc1aQ9CU62 Gm26215-201ENSMUST00000158584 139 ntBASIC3.41□□□□□ -1.86
Smc1aQ9CU62 Gm17186-201ENSMUST00000171742 456 ntBASIC3.41□□□□□ -1.86
Smc1aQ9CU62 Gm27942-201ENSMUST00000184669 101 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms