Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Gm14566-201ENSMUST00000118915 321 ntBASIC2.68□□□□□ -1.98
Use1Q9CQ56 Gm14600-201ENSMUST00000121032 630 ntBASIC2.68□□□□□ -1.98
Use1Q9CQ56 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC2.68□□□□□ -1.98
Use1Q9CQ56 Gm22390-201ENSMUST00000157588 325 ntBASIC2.68□□□□□ -1.98
Use1Q9CQ56 Gm24736-201ENSMUST00000158862 130 ntBASIC2.68□□□□□ -1.98
Use1Q9CQ56 Gm23473-201ENSMUST00000158883 116 ntBASIC2.68□□□□□ -1.98
Use1Q9CQ56 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC2.68□□□□□ -1.98
Use1Q9CQ56 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC2.68□□□□□ -1.98
Use1Q9CQ56 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Use1Q9CQ56 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Use1Q9CQ56 Gm6651-201ENSMUST00000189471 271 ntBASIC2.68□□□□□ -1.98
Use1Q9CQ56 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC2.68□□□□□ -1.98
Use1Q9CQ56 Gm7142-201ENSMUST00000194232 586 ntBASIC2.68□□□□□ -1.98
Use1Q9CQ56 Igkv1-115-201ENSMUST00000198714 302 ntBASIC2.68□□□□□ -1.98
Use1Q9CQ56 Gm42828-201ENSMUST00000199669 469 ntBASIC2.68□□□□□ -1.98
Use1Q9CQ56 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.68□□□□□ -1.98
Use1Q9CQ56 Gm43967-201ENSMUST00000203787 301 ntBASIC2.68□□□□□ -1.98
Use1Q9CQ56 Gm43932-201ENSMUST00000204499 52 ntBASIC2.68□□□□□ -1.98
Use1Q9CQ56 Gm45048-201ENSMUST00000207058 429 ntBASIC2.68□□□□□ -1.98
Use1Q9CQ56 Fam24a-202ENSMUST00000207439 711 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Use1Q9CQ56 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Use1Q9CQ56 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Use1Q9CQ56 AC147639.1-201ENSMUST00000224216 661 ntBASIC2.68□□□□□ -1.98
Use1Q9CQ56 AC129202.3-201ENSMUST00000224413 733 ntBASIC2.68□□□□□ -1.98
Use1Q9CQ56 AC241593.1-201ENSMUST00000224768 397 ntBASIC2.68□□□□□ -1.98
Use1Q9CQ56 AC154788.1-201ENSMUST00000225003 340 ntBASIC2.68□□□□□ -1.98
Use1Q9CQ56 AC165284.1-201ENSMUST00000228614 458 ntBASIC2.68□□□□□ -1.98
Use1Q9CQ56 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Use1Q9CQ56 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Use1Q9CQ56 Gm9174-201ENSMUST00000078149 255 ntBASIC2.68□□□□□ -1.98
Use1Q9CQ56 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
Use1Q9CQ56 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC2.68□□□□□ -1.98
Use1Q9CQ56 Gm42721-201ENSMUST00000197165 1523 ntBASIC2.68□□□□□ -1.98
Use1Q9CQ56 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Use1Q9CQ56 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
Use1Q9CQ56 Omd-201ENSMUST00000065494 1556 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Use1Q9CQ56 Gm25526-201ENSMUST00000104332 132 ntBASIC2.67□□□□□ -1.98
Use1Q9CQ56 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.67□□□□□ -1.98
Use1Q9CQ56 Gm22676-201ENSMUST00000116972 129 ntBASIC2.67□□□□□ -1.98
Use1Q9CQ56 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC2.67□□□□□ -1.98
Use1Q9CQ56 Gm15936-201ENSMUST00000118706 460 ntBASIC2.67□□□□□ -1.98
Use1Q9CQ56 Gm12876-201ENSMUST00000120975 408 ntBASIC2.67□□□□□ -1.98
Use1Q9CQ56 Gm11456-201ENSMUST00000121070 256 ntBASIC2.67□□□□□ -1.98
Use1Q9CQ56 Gm11229-201ENSMUST00000121993 437 ntBASIC2.67□□□□□ -1.98
Use1Q9CQ56 Gm15274-201ENSMUST00000131442 291 ntBASIC2.67□□□□□ -1.98
Use1Q9CQ56 Gm21979-201ENSMUST00000139887 291 ntBASIC2.67□□□□□ -1.98
Use1Q9CQ56 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC2.67□□□□□ -1.98
Use1Q9CQ56 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Use1Q9CQ56 Gm15259-201ENSMUST00000151262 291 ntBASIC2.67□□□□□ -1.98
Use1Q9CQ56 Gm22330-201ENSMUST00000158068 115 ntBASIC2.67□□□□□ -1.98
Use1Q9CQ56 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Use1Q9CQ56 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC2.67□□□□□ -1.98
Use1Q9CQ56 Gm26960-201ENSMUST00000182263 412 ntBASIC2.67□□□□□ -1.98
Use1Q9CQ56 Gm8816-201ENSMUST00000182280 1163 ntBASIC2.67□□□□□ -1.98
Use1Q9CQ56 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC2.67□□□□□ -1.98
Use1Q9CQ56 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Use1Q9CQ56 Gm6060-201ENSMUST00000188671 251 ntBASIC2.67□□□□□ -1.98
Use1Q9CQ56 Gm37007-201ENSMUST00000194234 319 ntBASIC2.67□□□□□ -1.98
Use1Q9CQ56 Gm43478-201ENSMUST00000200381 292 ntBASIC2.67□□□□□ -1.98
Use1Q9CQ56 Olfr189-ps1-201ENSMUST00000205310 804 ntBASIC2.67□□□□□ -1.98
Use1Q9CQ56 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Use1Q9CQ56 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.67□□□□□ -1.98
Use1Q9CQ56 AC154506.1-201ENSMUST00000225178 621 ntBASIC2.67□□□□□ -1.98
Use1Q9CQ56 AC183096.1-201ENSMUST00000226392 130 ntBASIC2.67□□□□□ -1.98
Use1Q9CQ56 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Use1Q9CQ56 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Use1Q9CQ56 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC2.67□□□□□ -1.98
Use1Q9CQ56 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
Use1Q9CQ56 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Use1Q9CQ56 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
Use1Q9CQ56 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC2.66□□□□□ -1.98
Use1Q9CQ56 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC2.66□□□□□ -1.98
Use1Q9CQ56 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Use1Q9CQ56 Gm12706-201ENSMUST00000121588 698 ntBASIC2.66□□□□□ -1.98
Use1Q9CQ56 Gm12327-201ENSMUST00000121729 1168 ntBASIC2.66□□□□□ -1.98
Use1Q9CQ56 Gm14389-201ENSMUST00000140453 241 ntBASIC2.66□□□□□ -1.98
Use1Q9CQ56 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
Use1Q9CQ56 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
Use1Q9CQ56 Gm28011-201ENSMUST00000184097 175 ntBASIC2.66□□□□□ -1.98
Use1Q9CQ56 Gm27869-201ENSMUST00000184327 122 ntBASIC2.66□□□□□ -1.98
Use1Q9CQ56 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Use1Q9CQ56 Gm32340-201ENSMUST00000192883 259 ntBASIC2.66□□□□□ -1.98
Use1Q9CQ56 Gm44657-201ENSMUST00000208568 450 ntBASIC2.66□□□□□ -1.98
Use1Q9CQ56 Gm44688-201ENSMUST00000209083 537 ntBASIC2.66□□□□□ -1.98
Use1Q9CQ56 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Use1Q9CQ56 AC157017.2-201ENSMUST00000218354 777 ntBASIC2.66□□□□□ -1.98
Use1Q9CQ56 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Use1Q9CQ56 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Use1Q9CQ56 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC2.66□□□□□ -1.98
Use1Q9CQ56 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Use1Q9CQ56 Gm44049-201ENSMUST00000204905 2984 ntBASIC2.66□□□□□ -1.98
Use1Q9CQ56 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Use1Q9CQ56 AC154511.1-201ENSMUST00000222578 1587 ntBASIC2.66□□□□□ -1.98
Use1Q9CQ56 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.98
Use1Q9CQ56 Gm8473-201ENSMUST00000176697 1885 ntBASIC2.65□□□□□ -1.98
Use1Q9CQ56 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Use1Q9CQ56 Gm14901-201ENSMUST00000119001 283 ntBASIC2.65□□□□□ -1.99
Use1Q9CQ56 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
Use1Q9CQ56 Mup-ps4-201ENSMUST00000151005 539 ntBASIC2.65□□□□□ -1.99
Use1Q9CQ56 Gm22563-201ENSMUST00000157333 269 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 87.9 ms