Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 AC158392.2-201ENSMUST00000225402 969 ntBASIC3.22□□□□□ -1.89
Ccdc28bQ8CEG5 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC3.22□□□□□ -1.89
Ccdc28bQ8CEG5 Gm25135-201ENSMUST00000082648 143 ntBASIC3.22□□□□□ -1.89
Ccdc28bQ8CEG5 Gm25126-201ENSMUST00000083343 102 ntBASIC3.22□□□□□ -1.89
Ccdc28bQ8CEG5 Gm26165-201ENSMUST00000083791 138 ntBASIC3.22□□□□□ -1.89
Ccdc28bQ8CEG5 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC3.22□□□□□ -1.89
Ccdc28bQ8CEG5 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Ccdc28bQ8CEG5 Gm16436-201ENSMUST00000121510 1607 ntBASIC3.22□□□□□ -1.89
Ccdc28bQ8CEG5 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC3.21□□□□□ -1.89
Ccdc28bQ8CEG5 Gm43379-201ENSMUST00000196253 7726 ntBASIC3.21□□□□□ -1.9
Ccdc28bQ8CEG5 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Ccdc28bQ8CEG5 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Ccdc28bQ8CEG5 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
Ccdc28bQ8CEG5 AC152159.1-201ENSMUST00000226719 2769 ntBASIC3.21□□□□□ -1.9
Ccdc28bQ8CEG5 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Ccdc28bQ8CEG5 Olfr65-201ENSMUST00000106864 2648 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
Ccdc28bQ8CEG5 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
Ccdc28bQ8CEG5 Gm13574-201ENSMUST00000120482 394 ntBASIC3.21□□□□□ -1.9
Ccdc28bQ8CEG5 Gm11321-201ENSMUST00000121257 902 ntBASIC3.21□□□□□ -1.9
Ccdc28bQ8CEG5 Gm14766-201ENSMUST00000121689 367 ntBASIC3.21□□□□□ -1.9
Ccdc28bQ8CEG5 Gm24836-201ENSMUST00000122609 108 ntBASIC3.21□□□□□ -1.9
Ccdc28bQ8CEG5 Gm22841-201ENSMUST00000158443 62 ntBASIC3.21□□□□□ -1.9
Ccdc28bQ8CEG5 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC3.21□□□□□ -1.9
Ccdc28bQ8CEG5 Gm25534-201ENSMUST00000175365 125 ntBASIC3.21□□□□□ -1.9
Ccdc28bQ8CEG5 Gm25451-201ENSMUST00000177832 121 ntBASIC3.21□□□□□ -1.9
Ccdc28bQ8CEG5 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
Ccdc28bQ8CEG5 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
Ccdc28bQ8CEG5 Gm23619-201ENSMUST00000178411 94 ntBASIC3.21□□□□□ -1.9
Ccdc28bQ8CEG5 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Ccdc28bQ8CEG5 Gm25474-201ENSMUST00000179052 94 ntBASIC3.21□□□□□ -1.9
Ccdc28bQ8CEG5 Gm22047-201ENSMUST00000179176 94 ntBASIC3.21□□□□□ -1.9
Ccdc28bQ8CEG5 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Ccdc28bQ8CEG5 Gm27527-201ENSMUST00000183903 99 ntBASIC3.21□□□□□ -1.9
Ccdc28bQ8CEG5 Gm29408-201ENSMUST00000187536 216 ntBASIC3.21□□□□□ -1.9
Ccdc28bQ8CEG5 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC3.21□□□□□ -1.9
Ccdc28bQ8CEG5 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC3.21□□□□□ -1.9
Ccdc28bQ8CEG5 AC116589.1-201ENSMUST00000220634 327 ntBASIC3.21□□□□□ -1.9
Ccdc28bQ8CEG5 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC3.21□□□□□ -1.9
Ccdc28bQ8CEG5 AC100733.1-201ENSMUST00000228494 407 ntBASIC3.21□□□□□ -1.9
Ccdc28bQ8CEG5 Gm23297-201ENSMUST00000083184 127 ntBASIC3.21□□□□□ -1.9
Ccdc28bQ8CEG5 Gm8074-201ENSMUST00000095071 252 ntBASIC3.21□□□□□ -1.9
Ccdc28bQ8CEG5 Olfr389-201ENSMUST00000122224 3057 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
Ccdc28bQ8CEG5 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Ccdc28bQ8CEG5 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 AC162910.1-201ENSMUST00000221219 1723 ntBASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 Gm25507-201ENSMUST00000116981 144 ntBASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 Gm13627-201ENSMUST00000119700 706 ntBASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 Gm13973-201ENSMUST00000121371 894 ntBASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 Gm14581-201ENSMUST00000121726 198 ntBASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 Gm12755-201ENSMUST00000122297 282 ntBASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 Gm2020-201ENSMUST00000145242 579 ntBASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 Gm23602-201ENSMUST00000157258 132 ntBASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 Gm25667-201ENSMUST00000157701 275 ntBASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 Gm24961-201ENSMUST00000157918 184 ntBASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 Gm24537-201ENSMUST00000157950 102 ntBASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 Gm20415-201ENSMUST00000172877 423 ntBASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 Mir496b-201ENSMUST00000184935 113 ntBASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 Gm18296-201ENSMUST00000192475 783 ntBASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 Gm43114-201ENSMUST00000198298 343 ntBASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 AL603834.1-201ENSMUST00000198372 121 ntBASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 Gm43513-201ENSMUST00000199779 1076 ntBASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 Igkv11-114-201ENSMUST00000200013 346 ntBASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 Gm43487-201ENSMUST00000200331 1031 ntBASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 Gm43224-201ENSMUST00000201567 898 ntBASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 Gm44611-201ENSMUST00000207507 355 ntBASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 Ifitm6-202ENSMUST00000209328 678 ntAPPRIS P2 TSL 5 BASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 Gm19572-201ENSMUST00000214326 338 ntBASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 Gm46994-201ENSMUST00000221523 219 ntBASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 AC239878.1-201ENSMUST00000224212 506 ntBASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 AC156790.3-201ENSMUST00000226200 254 ntBASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 AC160930.1-201ENSMUST00000227194 337 ntBASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Ccdc28bQ8CEG5 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Ccdc28bQ8CEG5 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Ccdc28bQ8CEG5 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.19□□□□□ -1.9
Ccdc28bQ8CEG5 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
Ccdc28bQ8CEG5 Gm44789-201ENSMUST00000207195 3101 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms