Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm20651-201ENSMUST00000177219 329 ntBASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Mir5123-201ENSMUST00000177794 83 ntBASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Snord116l12-201ENSMUST00000179816 94 ntBASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm26652-202ENSMUST00000181672 475 ntBASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm29299-201ENSMUST00000185609 923 ntBASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm29573-201ENSMUST00000190291 919 ntBASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm28724-202ENSMUST00000194218 295 ntBASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm29950-201ENSMUST00000195273 237 ntBASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm44125-201ENSMUST00000203068 448 ntBASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm45192-201ENSMUST00000206749 283 ntBASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Olfr114-202ENSMUST00000214871 1256 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 AC101677.1-201ENSMUST00000218590 158 ntBASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 AC121966.1-201ENSMUST00000221458 282 ntBASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm9370-201ENSMUST00000222787 609 ntBASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm18026-201ENSMUST00000222789 727 ntBASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Mir21a-201ENSMUST00000083521 92 ntBASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Gm23733-201ENSMUST00000083750 106 ntBASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Mga-202ENSMUST00000079934 13304 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Atg4aQ8C9S8 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Atg4aQ8C9S8 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Atg4aQ8C9S8 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
Atg4aQ8C9S8 Mir499-201ENSMUST00000102357 79 ntBASIC3.67□□□□□ -1.82
Atg4aQ8C9S8 Gm11845-201ENSMUST00000117886 327 ntBASIC3.67□□□□□ -1.82
Atg4aQ8C9S8 Gm14128-201ENSMUST00000119514 1011 ntBASIC3.67□□□□□ -1.82
Atg4aQ8C9S8 Gm13627-201ENSMUST00000119700 706 ntBASIC3.67□□□□□ -1.82
Atg4aQ8C9S8 Gm11229-201ENSMUST00000121993 437 ntBASIC3.67□□□□□ -1.82
Atg4aQ8C9S8 Gm14041-201ENSMUST00000150181 276 ntTSL 3 BASIC3.67□□□□□ -1.82
Atg4aQ8C9S8 Gm22961-201ENSMUST00000157964 106 ntBASIC3.67□□□□□ -1.82
Atg4aQ8C9S8 B230216N24Rik-202ENSMUST00000159353 345 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Atg4aQ8C9S8 Gm20415-201ENSMUST00000172877 423 ntBASIC3.67□□□□□ -1.82
Atg4aQ8C9S8 Mir3112-201ENSMUST00000175431 82 ntBASIC3.67□□□□□ -1.82
Atg4aQ8C9S8 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC3.67□□□□□ -1.82
Atg4aQ8C9S8 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC3.67□□□□□ -1.82
Atg4aQ8C9S8 Gm27676-201ENSMUST00000183669 61 ntBASIC3.67□□□□□ -1.82
Atg4aQ8C9S8 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC3.67□□□□□ -1.82
Atg4aQ8C9S8 Gm28552-201ENSMUST00000190725 388 ntBASIC3.67□□□□□ -1.82
Atg4aQ8C9S8 Ighv1-40-201ENSMUST00000194231 345 ntBASIC3.67□□□□□ -1.82
Atg4aQ8C9S8 Gm43494-201ENSMUST00000197672 388 ntBASIC3.67□□□□□ -1.82
Atg4aQ8C9S8 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC3.67□□□□□ -1.82
Atg4aQ8C9S8 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC3.67□□□□□ -1.82
Atg4aQ8C9S8 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC3.67□□□□□ -1.82
Atg4aQ8C9S8 Gm18602-201ENSMUST00000209794 851 ntBASIC3.67□□□□□ -1.82
Atg4aQ8C9S8 Gm5358-201ENSMUST00000212814 353 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 101.9 ms