Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.43□□□□□ -2.02
Trub1Q8C0D0 Gm43722-201ENSMUST00000196054 124 ntBASIC2.43□□□□□ -2.02
Trub1Q8C0D0 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.43□□□□□ -2.02
Trub1Q8C0D0 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Trub1Q8C0D0 Gm46194-201ENSMUST00000218136 320 ntBASIC2.43□□□□□ -2.02
Trub1Q8C0D0 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.43□□□□□ -2.02
Trub1Q8C0D0 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.43□□□□□ -2.02
Trub1Q8C0D0 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Trub1Q8C0D0 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Trub1Q8C0D0 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.43□□□□□ -2.02
Trub1Q8C0D0 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.43□□□□□ -2.02
Trub1Q8C0D0 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Trub1Q8C0D0 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
Trub1Q8C0D0 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.43□□□□□ -2.02
Trub1Q8C0D0 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Trub1Q8C0D0 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.42□□□□□ -2.02
Trub1Q8C0D0 Fnd3c2-201ENSMUST00000091282 3662 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Trub1Q8C0D0 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Trub1Q8C0D0 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC2.42□□□□□ -2.02
Trub1Q8C0D0 Gm14125-201ENSMUST00000113442 680 ntBASIC2.42□□□□□ -2.02
Trub1Q8C0D0 Gm15087-201ENSMUST00000117465 1172 ntBASIC2.42□□□□□ -2.02
Trub1Q8C0D0 Gm15025-201ENSMUST00000118434 418 ntBASIC2.42□□□□□ -2.02
Trub1Q8C0D0 Gm14652-201ENSMUST00000118479 235 ntBASIC2.42□□□□□ -2.02
Trub1Q8C0D0 Gm25945-201ENSMUST00000122484 135 ntBASIC2.42□□□□□ -2.02
Trub1Q8C0D0 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC2.42□□□□□ -2.02
Trub1Q8C0D0 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Trub1Q8C0D0 Gm5958-201ENSMUST00000147698 297 ntBASIC2.42□□□□□ -2.02
Trub1Q8C0D0 Gm23312-201ENSMUST00000158774 102 ntBASIC2.42□□□□□ -2.02
Trub1Q8C0D0 Gm23053-201ENSMUST00000175136 96 ntBASIC2.42□□□□□ -2.02
Trub1Q8C0D0 Gm29553-201ENSMUST00000189692 279 ntBASIC2.42□□□□□ -2.02
Trub1Q8C0D0 Gm28788-201ENSMUST00000189717 375 ntBASIC2.42□□□□□ -2.02
Trub1Q8C0D0 Gm29558-201ENSMUST00000190134 375 ntBASIC2.42□□□□□ -2.02
Trub1Q8C0D0 Gm29524-201ENSMUST00000190819 699 ntBASIC2.42□□□□□ -2.02
Trub1Q8C0D0 Gm38214-201ENSMUST00000192581 988 ntBASIC2.42□□□□□ -2.02
Trub1Q8C0D0 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC2.42□□□□□ -2.02
Trub1Q8C0D0 Gm42578-201ENSMUST00000199960 194 ntBASIC2.42□□□□□ -2.02
Trub1Q8C0D0 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Trub1Q8C0D0 AC160970.1-201ENSMUST00000219311 475 ntBASIC2.42□□□□□ -2.02
Trub1Q8C0D0 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC2.42□□□□□ -2.02
Trub1Q8C0D0 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Trub1Q8C0D0 AC117814.1-201ENSMUST00000226135 352 ntBASIC2.42□□□□□ -2.02
Trub1Q8C0D0 AC163664.1-201ENSMUST00000226251 1248 ntBASIC2.42□□□□□ -2.02
Trub1Q8C0D0 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Trub1Q8C0D0 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
Trub1Q8C0D0 Olfr919-201ENSMUST00000071425 948 ntAPPRIS P2 BASIC2.42□□□□□ -2.02
Trub1Q8C0D0 Gm4945-201ENSMUST00000075152 453 ntBASIC2.42□□□□□ -2.02
Trub1Q8C0D0 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Trub1Q8C0D0 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Trub1Q8C0D0 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Trub1Q8C0D0 AC121598.3-201ENSMUST00000227179 1643 ntBASIC2.42□□□□□ -2.02
Trub1Q8C0D0 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
Trub1Q8C0D0 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Trub1Q8C0D0 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC2.41□□□□□ -2.02
Trub1Q8C0D0 Gm15161-201ENSMUST00000117340 387 ntBASIC2.41□□□□□ -2.02
Trub1Q8C0D0 Gm9432-201ENSMUST00000117810 759 ntBASIC2.41□□□□□ -2.02
Trub1Q8C0D0 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC2.41□□□□□ -2.02
Trub1Q8C0D0 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC2.41□□□□□ -2.02
Trub1Q8C0D0 Gm6591-201ENSMUST00000121063 434 ntBASIC2.41□□□□□ -2.02
Trub1Q8C0D0 Gm12095-201ENSMUST00000121962 816 ntBASIC2.41□□□□□ -2.02
Trub1Q8C0D0 Gm14800-201ENSMUST00000122084 1272 ntBASIC2.41□□□□□ -2.02
Trub1Q8C0D0 Gm11819-201ENSMUST00000122192 372 ntBASIC2.41□□□□□ -2.02
Trub1Q8C0D0 Gm25944-201ENSMUST00000178758 94 ntBASIC2.41□□□□□ -2.02
Trub1Q8C0D0 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC2.41□□□□□ -2.02
Trub1Q8C0D0 Gm28196-201ENSMUST00000187719 640 ntBASIC2.41□□□□□ -2.02
Trub1Q8C0D0 Gm44348-201ENSMUST00000200165 122 ntBASIC2.41□□□□□ -2.02
Trub1Q8C0D0 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.41□□□□□ -2.02
Trub1Q8C0D0 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC2.41□□□□□ -2.02
Trub1Q8C0D0 AC134254.5-201ENSMUST00000223436 400 ntBASIC2.41□□□□□ -2.02
Trub1Q8C0D0 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Trub1Q8C0D0 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
Trub1Q8C0D0 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Trub1Q8C0D0 Gm43230-201ENSMUST00000200980 2129 ntBASIC2.41□□□□□ -2.02
Trub1Q8C0D0 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
Trub1Q8C0D0 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC2.4□□□□□ -2.03
Trub1Q8C0D0 Gm11598-201ENSMUST00000119257 357 ntBASIC2.4□□□□□ -2.03
Trub1Q8C0D0 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC2.4□□□□□ -2.03
Trub1Q8C0D0 Gm16017-201ENSMUST00000119834 208 ntBASIC2.4□□□□□ -2.03
Trub1Q8C0D0 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Trub1Q8C0D0 Sult2a-ps4-201ENSMUST00000121421 386 ntBASIC2.4□□□□□ -2.03
Trub1Q8C0D0 Gm15488-201ENSMUST00000121682 670 ntBASIC2.4□□□□□ -2.03
Trub1Q8C0D0 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
Trub1Q8C0D0 Gm22839-201ENSMUST00000158436 304 ntBASIC2.4□□□□□ -2.03
Trub1Q8C0D0 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
Trub1Q8C0D0 Mir3473c-201ENSMUST00000175262 81 ntBASIC2.4□□□□□ -2.03
Trub1Q8C0D0 Mir5136-201ENSMUST00000175573 76 ntBASIC2.4□□□□□ -2.03
Trub1Q8C0D0 Gm19641-201ENSMUST00000188432 417 ntBASIC2.4□□□□□ -2.03
Trub1Q8C0D0 Gm37281-201ENSMUST00000192412 439 ntBASIC2.4□□□□□ -2.03
Trub1Q8C0D0 Gm38006-201ENSMUST00000192421 697 ntTSL 5 BASIC2.4□□□□□ -2.03
Trub1Q8C0D0 Gm43991-201ENSMUST00000203751 274 ntBASIC2.4□□□□□ -2.03
Trub1Q8C0D0 Gm44857-201ENSMUST00000208331 196 ntBASIC2.4□□□□□ -2.03
Trub1Q8C0D0 Gm45687-201ENSMUST00000209454 155 ntBASIC2.4□□□□□ -2.03
Trub1Q8C0D0 Gm45316-201ENSMUST00000210128 162 ntBASIC2.4□□□□□ -2.03
Trub1Q8C0D0 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC2.4□□□□□ -2.03
Trub1Q8C0D0 Gm18704-201ENSMUST00000219736 446 ntBASIC2.4□□□□□ -2.03
Trub1Q8C0D0 AC156952.1-201ENSMUST00000220361 793 ntBASIC2.4□□□□□ -2.03
Trub1Q8C0D0 AC165146.1-201ENSMUST00000223777 900 ntBASIC2.4□□□□□ -2.03
Trub1Q8C0D0 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Trub1Q8C0D0 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
Trub1Q8C0D0 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.4□□□□□ -2.03
Trub1Q8C0D0 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms