Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Gm5762-201ENSMUST00000119204 258 ntBASIC3.22□□□□□ -1.89
Ckap4Q8BMK4 Gm15060-201ENSMUST00000119550 948 ntBASIC3.22□□□□□ -1.89
Ckap4Q8BMK4 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC3.22□□□□□ -1.89
Ckap4Q8BMK4 Gm23538-201ENSMUST00000157535 101 ntBASIC3.22□□□□□ -1.89
Ckap4Q8BMK4 Gm23084-201ENSMUST00000157850 114 ntBASIC3.22□□□□□ -1.89
Ckap4Q8BMK4 Gm26271-201ENSMUST00000158349 104 ntBASIC3.22□□□□□ -1.89
Ckap4Q8BMK4 Gm23583-201ENSMUST00000158533 289 ntBASIC3.22□□□□□ -1.89
Ckap4Q8BMK4 Ear-ps10-201ENSMUST00000161871 460 ntBASIC3.22□□□□□ -1.89
Ckap4Q8BMK4 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC3.22□□□□□ -1.89
Ckap4Q8BMK4 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC3.22□□□□□ -1.89
Ckap4Q8BMK4 Rpl48-ps1-201ENSMUST00000177147 556 ntBASIC3.22□□□□□ -1.89
Ckap4Q8BMK4 Gm26991-201ENSMUST00000180950 620 ntBASIC3.22□□□□□ -1.89
Ckap4Q8BMK4 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Ckap4Q8BMK4 Gm37946-201ENSMUST00000192064 347 ntBASIC3.22□□□□□ -1.89
Ckap4Q8BMK4 Gm31123-201ENSMUST00000192094 666 ntBASIC3.22□□□□□ -1.89
Ckap4Q8BMK4 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC3.22□□□□□ -1.89
Ckap4Q8BMK4 Smcp-202ENSMUST00000194965 744 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
Ckap4Q8BMK4 Gm42805-201ENSMUST00000196158 276 ntBASIC3.22□□□□□ -1.89
Ckap4Q8BMK4 Gm42924-201ENSMUST00000197261 185 ntBASIC3.22□□□□□ -1.89
Ckap4Q8BMK4 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC3.22□□□□□ -1.89
Ckap4Q8BMK4 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.22□□□□□ -1.89
Ckap4Q8BMK4 Gm45438-201ENSMUST00000210242 564 ntBASIC3.22□□□□□ -1.89
Ckap4Q8BMK4 Gm6842-201ENSMUST00000211361 390 ntBASIC3.22□□□□□ -1.89
Ckap4Q8BMK4 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC3.22□□□□□ -1.89
Ckap4Q8BMK4 AC161245.1-201ENSMUST00000217207 740 ntTSL 3 BASIC3.22□□□□□ -1.89
Ckap4Q8BMK4 AC121844.1-201ENSMUST00000218706 137 ntBASIC3.22□□□□□ -1.89
Ckap4Q8BMK4 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Ckap4Q8BMK4 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Ckap4Q8BMK4 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC3.22□□□□□ -1.89
Ckap4Q8BMK4 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Ckap4Q8BMK4 AC154634.4-201ENSMUST00000226077 2665 ntBASIC3.22□□□□□ -1.89
Ckap4Q8BMK4 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Ckap4Q8BMK4 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.22□□□□□ -1.89
Ckap4Q8BMK4 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.89
Ckap4Q8BMK4 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.89
Ckap4Q8BMK4 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
Ckap4Q8BMK4 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC3.21□□□□□ -1.9
Ckap4Q8BMK4 Igkv7-33-201ENSMUST00000103376 362 ntAPPRIS ALT2 BASIC3.21□□□□□ -1.9
Ckap4Q8BMK4 Tcrg-V5-201ENSMUST00000103556 293 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Ckap4Q8BMK4 Gm25833-201ENSMUST00000104137 133 ntBASIC3.21□□□□□ -1.9
Ckap4Q8BMK4 Gm14459-201ENSMUST00000115573 540 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Ckap4Q8BMK4 Gm15783-201ENSMUST00000117521 633 ntBASIC3.21□□□□□ -1.9
Ckap4Q8BMK4 Gm11943-201ENSMUST00000119473 327 ntBASIC3.21□□□□□ -1.9
Ckap4Q8BMK4 Gm13751-201ENSMUST00000120280 752 ntBASIC3.21□□□□□ -1.9
Ckap4Q8BMK4 Gm15177-201ENSMUST00000120491 577 ntBASIC3.21□□□□□ -1.9
Ckap4Q8BMK4 Gm22765-201ENSMUST00000158371 128 ntBASIC3.21□□□□□ -1.9
Ckap4Q8BMK4 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC3.21□□□□□ -1.9
Ckap4Q8BMK4 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC3.21□□□□□ -1.9
Ckap4Q8BMK4 Mir6338-201ENSMUST00000183389 109 ntBASIC3.21□□□□□ -1.9
Ckap4Q8BMK4 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC3.21□□□□□ -1.9
Ckap4Q8BMK4 Gm28785-201ENSMUST00000187478 379 ntBASIC3.21□□□□□ -1.9
Ckap4Q8BMK4 Gm29330-201ENSMUST00000190032 699 ntBASIC3.21□□□□□ -1.9
Ckap4Q8BMK4 Gm28098-201ENSMUST00000191361 699 ntBASIC3.21□□□□□ -1.9
Ckap4Q8BMK4 Gm37692-201ENSMUST00000192633 232 ntBASIC3.21□□□□□ -1.9
Ckap4Q8BMK4 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC3.21□□□□□ -1.9
Ckap4Q8BMK4 Gm43239-201ENSMUST00000200131 201 ntBASIC3.21□□□□□ -1.9
Ckap4Q8BMK4 Gm44355-201ENSMUST00000200417 104 ntBASIC3.21□□□□□ -1.9
Ckap4Q8BMK4 Gm43441-201ENSMUST00000201458 205 ntBASIC3.21□□□□□ -1.9
Ckap4Q8BMK4 AC118639.1-201ENSMUST00000227204 338 ntBASIC3.21□□□□□ -1.9
Ckap4Q8BMK4 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Ckap4Q8BMK4 Gm14442-201ENSMUST00000119690 1736 ntBASIC3.21□□□□□ -1.9
Ckap4Q8BMK4 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Ckap4Q8BMK4 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC3.21□□□□□ -1.9
Ckap4Q8BMK4 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
Ckap4Q8BMK4 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Ckap4Q8BMK4 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
Ckap4Q8BMK4 Gm44625-201ENSMUST00000207838 1561 ntBASIC3.21□□□□□ -1.9
Ckap4Q8BMK4 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Ckap4Q8BMK4 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Ckap4Q8BMK4 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC3.2□□□□□ -1.9
Ckap4Q8BMK4 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Ckap4Q8BMK4 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
Ckap4Q8BMK4 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Ckap4Q8BMK4 Gm9157-201ENSMUST00000117673 225 ntBASIC3.2□□□□□ -1.9
Ckap4Q8BMK4 Gm12225-201ENSMUST00000117995 298 ntBASIC3.2□□□□□ -1.9
Ckap4Q8BMK4 Gm15113-201ENSMUST00000119280 836 ntBASIC3.2□□□□□ -1.9
Ckap4Q8BMK4 Gm15142-201ENSMUST00000121013 856 ntBASIC3.2□□□□□ -1.9
Ckap4Q8BMK4 Gm15077-201ENSMUST00000122344 362 ntBASIC3.2□□□□□ -1.9
Ckap4Q8BMK4 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Ckap4Q8BMK4 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC3.2□□□□□ -1.9
Ckap4Q8BMK4 Gm23716-201ENSMUST00000157348 144 ntBASIC3.2□□□□□ -1.9
Ckap4Q8BMK4 Gm23755-201ENSMUST00000157578 343 ntBASIC3.2□□□□□ -1.9
Ckap4Q8BMK4 Gm24393-201ENSMUST00000158135 97 ntBASIC3.2□□□□□ -1.9
Ckap4Q8BMK4 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC3.2□□□□□ -1.9
Ckap4Q8BMK4 Mir5136-201ENSMUST00000175573 76 ntBASIC3.2□□□□□ -1.9
Ckap4Q8BMK4 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC3.2□□□□□ -1.9
Ckap4Q8BMK4 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Ckap4Q8BMK4 Mir6926-201ENSMUST00000184562 68 ntBASIC3.2□□□□□ -1.9
Ckap4Q8BMK4 Gm28146-201ENSMUST00000185517 701 ntBASIC3.2□□□□□ -1.9
Ckap4Q8BMK4 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Ckap4Q8BMK4 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC3.2□□□□□ -1.9
Ckap4Q8BMK4 Gm37495-201ENSMUST00000194590 264 ntBASIC3.2□□□□□ -1.9
Ckap4Q8BMK4 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Ckap4Q8BMK4 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.2□□□□□ -1.9
Ckap4Q8BMK4 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC3.2□□□□□ -1.9
Ckap4Q8BMK4 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Ckap4Q8BMK4 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC3.2□□□□□ -1.9
Ckap4Q8BMK4 Gm44449-201ENSMUST00000203610 153 ntBASIC3.2□□□□□ -1.9
Ckap4Q8BMK4 Gm45048-201ENSMUST00000207058 429 ntBASIC3.2□□□□□ -1.9
Ckap4Q8BMK4 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms