Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm37993-201ENSMUST00000195301 988 ntBASIC3.22□□□□□ -1.89
Ccdc40Q8BI79 Igkv9-128-201ENSMUST00000196602 353 ntBASIC3.22□□□□□ -1.89
Ccdc40Q8BI79 Gm44657-201ENSMUST00000208568 450 ntBASIC3.22□□□□□ -1.89
Ccdc40Q8BI79 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Ccdc40Q8BI79 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC3.22□□□□□ -1.89
Ccdc40Q8BI79 Gm19987-201ENSMUST00000216339 499 ntBASIC3.22□□□□□ -1.89
Ccdc40Q8BI79 Olfr274-ps1-201ENSMUST00000216601 595 ntBASIC3.22□□□□□ -1.89
Ccdc40Q8BI79 Gm46233-201ENSMUST00000217831 449 ntBASIC3.22□□□□□ -1.89
Ccdc40Q8BI79 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.22□□□□□ -1.89
Ccdc40Q8BI79 AC241593.1-201ENSMUST00000224768 397 ntBASIC3.22□□□□□ -1.89
Ccdc40Q8BI79 AC117656.3-204ENSMUST00000225656 859 ntBASIC3.22□□□□□ -1.89
Ccdc40Q8BI79 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Ccdc40Q8BI79 Gm22740-201ENSMUST00000083439 109 ntBASIC3.22□□□□□ -1.89
Ccdc40Q8BI79 n-R5s85-201ENSMUST00000083453 113 ntBASIC3.22□□□□□ -1.89
Ccdc40Q8BI79 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Ccdc40Q8BI79 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Ccdc40Q8BI79 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Ccdc40Q8BI79 Gm16436-201ENSMUST00000121510 1607 ntBASIC3.22□□□□□ -1.89
Ccdc40Q8BI79 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Ccdc40Q8BI79 Gm37143-201ENSMUST00000195180 3259 ntBASIC3.22□□□□□ -1.89
Ccdc40Q8BI79 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Ccdc40Q8BI79 Gm43780-201ENSMUST00000196510 3600 ntBASIC3.21□□□□□ -1.89
Ccdc40Q8BI79 Gm25764-201ENSMUST00000104092 134 ntBASIC3.21□□□□□ -1.9
Ccdc40Q8BI79 Gm22072-201ENSMUST00000116850 121 ntBASIC3.21□□□□□ -1.9
Ccdc40Q8BI79 Gm8569-201ENSMUST00000117630 647 ntBASIC3.21□□□□□ -1.9
Ccdc40Q8BI79 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC3.21□□□□□ -1.9
Ccdc40Q8BI79 Gm14647-201ENSMUST00000119392 680 ntBASIC3.21□□□□□ -1.9
Ccdc40Q8BI79 Gm22956-201ENSMUST00000122520 80 ntBASIC3.21□□□□□ -1.9
Ccdc40Q8BI79 Gm26020-201ENSMUST00000122729 183 ntBASIC3.21□□□□□ -1.9
Ccdc40Q8BI79 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC3.21□□□□□ -1.9
Ccdc40Q8BI79 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Ccdc40Q8BI79 Gm16354-201ENSMUST00000155376 150 ntBASIC3.21□□□□□ -1.9
Ccdc40Q8BI79 Gm23028-201ENSMUST00000158773 265 ntBASIC3.21□□□□□ -1.9
Ccdc40Q8BI79 Gm8338-201ENSMUST00000163928 363 ntBASIC3.21□□□□□ -1.9
Ccdc40Q8BI79 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
Ccdc40Q8BI79 Gm24925-201ENSMUST00000178157 107 ntBASIC3.21□□□□□ -1.9
Ccdc40Q8BI79 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Ccdc40Q8BI79 Gm29104-201ENSMUST00000186304 222 ntBASIC3.21□□□□□ -1.9
Ccdc40Q8BI79 Gm29602-201ENSMUST00000186887 442 ntBASIC3.21□□□□□ -1.9
Ccdc40Q8BI79 Gm44476-201ENSMUST00000196225 91 ntBASIC3.21□□□□□ -1.9
Ccdc40Q8BI79 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC3.21□□□□□ -1.9
Ccdc40Q8BI79 Gm43301-201ENSMUST00000198918 778 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Ccdc40Q8BI79 Gm7624-201ENSMUST00000209702 435 ntBASIC3.21□□□□□ -1.9
Ccdc40Q8BI79 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC3.21□□□□□ -1.9
Ccdc40Q8BI79 Gm45696-201ENSMUST00000212088 985 ntBASIC3.21□□□□□ -1.9
Ccdc40Q8BI79 Gm46436-201ENSMUST00000221851 1294 ntBASIC3.21□□□□□ -1.9
Ccdc40Q8BI79 AC154276.2-201ENSMUST00000227707 309 ntBASIC3.21□□□□□ -1.9
Ccdc40Q8BI79 Gm22979-201ENSMUST00000082609 159 ntBASIC3.21□□□□□ -1.9
Ccdc40Q8BI79 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Ccdc40Q8BI79 Gm28359-201ENSMUST00000187470 1322 ntBASIC3.2□□□□□ -1.9
Ccdc40Q8BI79 Olfr124-203ENSMUST00000216478 4416 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Ccdc40Q8BI79 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Ccdc40Q8BI79 Gm24340-201ENSMUST00000104208 97 ntBASIC3.2□□□□□ -1.9
Ccdc40Q8BI79 Gm22590-201ENSMUST00000104247 128 ntBASIC3.2□□□□□ -1.9
Ccdc40Q8BI79 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Ccdc40Q8BI79 Gm6274-201ENSMUST00000118173 797 ntBASIC3.2□□□□□ -1.9
Ccdc40Q8BI79 Gm14358-201ENSMUST00000118458 403 ntBASIC3.2□□□□□ -1.9
Ccdc40Q8BI79 Gm15190-201ENSMUST00000120855 276 ntBASIC3.2□□□□□ -1.9
Ccdc40Q8BI79 Gm26277-201ENSMUST00000157097 152 ntBASIC3.2□□□□□ -1.9
Ccdc40Q8BI79 Gm22755-201ENSMUST00000157143 100 ntBASIC3.2□□□□□ -1.9
Ccdc40Q8BI79 Gm22416-201ENSMUST00000158590 88 ntBASIC3.2□□□□□ -1.9
Ccdc40Q8BI79 Gm25119-201ENSMUST00000158815 88 ntBASIC3.2□□□□□ -1.9
Ccdc40Q8BI79 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.2□□□□□ -1.9
Ccdc40Q8BI79 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Ccdc40Q8BI79 Olfr944-202ENSMUST00000213908 1257 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
Ccdc40Q8BI79 Gm3333-202ENSMUST00000221763 1044 ntBASIC3.2□□□□□ -1.9
Ccdc40Q8BI79 AC154532.2-201ENSMUST00000228947 598 ntBASIC3.2□□□□□ -1.9
Ccdc40Q8BI79 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC3.2□□□□□ -1.9
Ccdc40Q8BI79 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Ccdc40Q8BI79 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC3.2□□□□□ -1.9
Ccdc40Q8BI79 Gm45104-201ENSMUST00000208748 4350 ntBASIC3.2□□□□□ -1.9
Ccdc40Q8BI79 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Ccdc40Q8BI79 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
Ccdc40Q8BI79 Olfr1229-203ENSMUST00000214593 3404 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Ccdc40Q8BI79 Gm14411-201ENSMUST00000121798 914 ntBASIC3.19□□□□□ -1.9
Ccdc40Q8BI79 n-R5s179-201ENSMUST00000122564 118 ntBASIC3.19□□□□□ -1.9
Ccdc40Q8BI79 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC3.19□□□□□ -1.9
Ccdc40Q8BI79 Gm24213-201ENSMUST00000158255 258 ntBASIC3.19□□□□□ -1.9
Ccdc40Q8BI79 Gm25977-201ENSMUST00000158697 85 ntBASIC3.19□□□□□ -1.9
Ccdc40Q8BI79 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Ccdc40Q8BI79 Gm20672-201ENSMUST00000176605 261 ntBASIC3.19□□□□□ -1.9
Ccdc40Q8BI79 Gm24757-201ENSMUST00000176987 371 ntBASIC3.19□□□□□ -1.9
Ccdc40Q8BI79 Gm27796-201ENSMUST00000183863 261 ntBASIC3.19□□□□□ -1.9
Ccdc40Q8BI79 Gm27893-201ENSMUST00000184408 194 ntBASIC3.19□□□□□ -1.9
Ccdc40Q8BI79 1700074A21Rik-201ENSMUST00000192404 346 ntBASIC3.19□□□□□ -1.9
Ccdc40Q8BI79 Gm7299-201ENSMUST00000194441 581 ntBASIC3.19□□□□□ -1.9
Ccdc40Q8BI79 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC3.19□□□□□ -1.9
Ccdc40Q8BI79 Igkv13-82-201ENSMUST00000200308 346 ntBASIC3.19□□□□□ -1.9
Ccdc40Q8BI79 Trav12-4-201ENSMUST00000200663 271 ntBASIC3.19□□□□□ -1.9
Ccdc40Q8BI79 Gm32381-201ENSMUST00000203192 476 ntBASIC3.19□□□□□ -1.9
Ccdc40Q8BI79 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC3.19□□□□□ -1.9
Ccdc40Q8BI79 Gm45438-201ENSMUST00000210242 564 ntBASIC3.19□□□□□ -1.9
Ccdc40Q8BI79 Gm35625-202ENSMUST00000211040 266 ntTSL 3 BASIC3.19□□□□□ -1.9
Ccdc40Q8BI79 AC122924.2-201ENSMUST00000220799 298 ntBASIC3.19□□□□□ -1.9
Ccdc40Q8BI79 AC174797.3-202ENSMUST00000224578 587 ntBASIC3.19□□□□□ -1.9
Ccdc40Q8BI79 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Ccdc40Q8BI79 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Ccdc40Q8BI79 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Ccdc40Q8BI79 Gm43326-201ENSMUST00000198459 1638 ntBASIC3.19□□□□□ -1.9
Ccdc40Q8BI79 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms