Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC1.68□□□□□ -2.14
Ttc28Q80XJ3 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC1.68□□□□□ -2.14
Ttc28Q80XJ3 Gm27527-201ENSMUST00000183903 99 ntBASIC1.68□□□□□ -2.14
Ttc28Q80XJ3 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Ttc28Q80XJ3 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC1.68□□□□□ -2.14
Ttc28Q80XJ3 Olfr178-203ENSMUST00000215032 2103 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Ttc28Q80XJ3 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.68□□□□□ -2.14
Ttc28Q80XJ3 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Ttc28Q80XJ3 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
Ttc28Q80XJ3 Gm23783-201ENSMUST00000157941 102 ntBASIC1.68□□□□□ -2.14
Ttc28Q80XJ3 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
Ttc28Q80XJ3 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC1.68□□□□□ -2.14
Ttc28Q80XJ3 Gm43239-201ENSMUST00000200131 201 ntBASIC1.68□□□□□ -2.14
Ttc28Q80XJ3 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC1.68□□□□□ -2.14
Ttc28Q80XJ3 Gm43718-201ENSMUST00000197524 1857 ntBASIC1.67□□□□□ -2.14
Ttc28Q80XJ3 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
Ttc28Q80XJ3 Vmn1r88-201ENSMUST00000171783 951 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Ttc28Q80XJ3 Gm22929-201ENSMUST00000175517 107 ntBASIC1.67□□□□□ -2.14
Ttc28Q80XJ3 Gm2691-201ENSMUST00000203205 901 ntBASIC1.67□□□□□ -2.14
Ttc28Q80XJ3 Gm45072-201ENSMUST00000208673 929 ntBASIC1.67□□□□□ -2.14
Ttc28Q80XJ3 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Ttc28Q80XJ3 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Ttc28Q80XJ3 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
Ttc28Q80XJ3 Gm25813-201ENSMUST00000082748 191 ntBASIC1.67□□□□□ -2.14
Ttc28Q80XJ3 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC1.67□□□□□ -2.14
Ttc28Q80XJ3 Gm10730-201ENSMUST00000194097 2723 ntBASIC1.67□□□□□ -2.14
Ttc28Q80XJ3 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Ttc28Q80XJ3 Gm26421-201ENSMUST00000104279 132 ntBASIC1.67□□□□□ -2.14
Ttc28Q80XJ3 Gm14804-201ENSMUST00000122322 508 ntBASIC1.67□□□□□ -2.14
Ttc28Q80XJ3 Gm9785-202ENSMUST00000144563 593 ntBASIC1.67□□□□□ -2.14
Ttc28Q80XJ3 Myhas-202ENSMUST00000145021 950 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Ttc28Q80XJ3 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC1.67□□□□□ -2.14
Ttc28Q80XJ3 Gm28500-201ENSMUST00000190286 151 ntBASIC1.67□□□□□ -2.14
Ttc28Q80XJ3 Mir3069-201ENSMUST00000198802 65 ntBASIC1.67□□□□□ -2.14
Ttc28Q80XJ3 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
Ttc28Q80XJ3 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC1.67□□□□□ -2.14
Ttc28Q80XJ3 AC122418.1-201ENSMUST00000225012 511 ntBASIC1.67□□□□□ -2.14
Ttc28Q80XJ3 AC154329.2-201ENSMUST00000225257 383 ntBASIC1.67□□□□□ -2.14
Ttc28Q80XJ3 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Ttc28Q80XJ3 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Ttc28Q80XJ3 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
Ttc28Q80XJ3 Gm22978-201ENSMUST00000082607 160 ntBASIC1.67□□□□□ -2.14
Ttc28Q80XJ3 Gm7195-201ENSMUST00000190869 1707 ntBASIC1.67□□□□□ -2.14
Ttc28Q80XJ3 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
Ttc28Q80XJ3 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Ttc28Q80XJ3 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Ttc28Q80XJ3 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Ttc28Q80XJ3 Gm14579-201ENSMUST00000117068 283 ntBASIC1.66□□□□□ -2.14
Ttc28Q80XJ3 Gm12512-201ENSMUST00000119620 217 ntBASIC1.66□□□□□ -2.14
Ttc28Q80XJ3 Gm26029-201ENSMUST00000158659 132 ntBASIC1.66□□□□□ -2.14
Ttc28Q80XJ3 Gm25831-201ENSMUST00000158924 163 ntBASIC1.66□□□□□ -2.14
Ttc28Q80XJ3 Mir7665-201ENSMUST00000184907 63 ntBASIC1.66□□□□□ -2.14
Ttc28Q80XJ3 Gm42506-201ENSMUST00000202009 150 ntBASIC1.66□□□□□ -2.14
Ttc28Q80XJ3 Gm7751-201ENSMUST00000212868 709 ntBASIC1.66□□□□□ -2.14
Ttc28Q80XJ3 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Ttc28Q80XJ3 Gm25080-201ENSMUST00000082526 107 ntBASIC1.66□□□□□ -2.14
Ttc28Q80XJ3 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC1.66□□□□□ -2.14
Ttc28Q80XJ3 Gm38278-201ENSMUST00000194715 1365 ntBASIC1.66□□□□□ -2.14
Ttc28Q80XJ3 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
Ttc28Q80XJ3 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Ttc28Q80XJ3 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC1.66□□□□□ -2.14
Ttc28Q80XJ3 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Ttc28Q80XJ3 Gm24900-201ENSMUST00000158128 134 ntBASIC1.66□□□□□ -2.14
Ttc28Q80XJ3 Gm27608-201ENSMUST00000184822 162 ntBASIC1.66□□□□□ -2.14
Ttc28Q80XJ3 Gm43494-201ENSMUST00000197672 388 ntBASIC1.66□□□□□ -2.14
Ttc28Q80XJ3 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
Ttc28Q80XJ3 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC1.66□□□□□ -2.14
Ttc28Q80XJ3 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC1.65□□□□□ -2.14
Ttc28Q80XJ3 Gm14469-201ENSMUST00000118363 202 ntBASIC1.65□□□□□ -2.14
Ttc28Q80XJ3 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
Ttc28Q80XJ3 Gm24857-201ENSMUST00000158061 310 ntBASIC1.65□□□□□ -2.14
Ttc28Q80XJ3 Gm18433-201ENSMUST00000192747 197 ntBASIC1.65□□□□□ -2.14
Ttc28Q80XJ3 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC1.65□□□□□ -2.14
Ttc28Q80XJ3 Gm43626-201ENSMUST00000198575 162 ntBASIC1.65□□□□□ -2.14
Ttc28Q80XJ3 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC1.65□□□□□ -2.14
Ttc28Q80XJ3 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.65□□□□□ -2.15
Ttc28Q80XJ3 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Ttc28Q80XJ3 Gm13409-201ENSMUST00000122072 546 ntBASIC1.65□□□□□ -2.15
Ttc28Q80XJ3 Scarna3b-201ENSMUST00000157533 139 ntBASIC1.65□□□□□ -2.15
Ttc28Q80XJ3 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC1.65□□□□□ -2.15
Ttc28Q80XJ3 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Ttc28Q80XJ3 Mir7678-201ENSMUST00000185076 71 ntBASIC1.65□□□□□ -2.15
Ttc28Q80XJ3 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC1.65□□□□□ -2.15
Ttc28Q80XJ3 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC1.65□□□□□ -2.15
Ttc28Q80XJ3 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC1.65□□□□□ -2.15
Ttc28Q80XJ3 AC171206.1-201ENSMUST00000213612 213 ntBASIC1.65□□□□□ -2.15
Ttc28Q80XJ3 AC158631.1-201ENSMUST00000219202 138 ntBASIC1.65□□□□□ -2.15
Ttc28Q80XJ3 AC101984.1-201ENSMUST00000219639 402 ntBASIC1.65□□□□□ -2.15
Ttc28Q80XJ3 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC1.65□□□□□ -2.15
Ttc28Q80XJ3 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Ttc28Q80XJ3 Olfr715b-201ENSMUST00000081044 948 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Ttc28Q80XJ3 Gm24661-201ENSMUST00000083205 104 ntBASIC1.65□□□□□ -2.15
Ttc28Q80XJ3 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC1.65□□□□□ -2.15
Ttc28Q80XJ3 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.65□□□□□ -2.15
Ttc28Q80XJ3 Gm6913-201ENSMUST00000100019 348 ntBASIC1.64□□□□□ -2.15
Ttc28Q80XJ3 Gm13024-201ENSMUST00000121756 718 ntBASIC1.64□□□□□ -2.15
Ttc28Q80XJ3 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC1.64□□□□□ -2.15
Ttc28Q80XJ3 Gm17850-201ENSMUST00000210023 1154 ntBASIC1.64□□□□□ -2.15
Ttc28Q80XJ3 Gm46146-201ENSMUST00000217483 346 ntBASIC1.64□□□□□ -2.15
Ttc28Q80XJ3 Gm29884-201ENSMUST00000218403 453 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms