Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm26228-201ENSMUST00000082512 107 ntBASIC3.82□□□□□ -1.8
Ubfd1Q78JW9 Snord21-201ENSMUST00000082519 94 ntBASIC3.82□□□□□ -1.8
Ubfd1Q78JW9 Gm25080-201ENSMUST00000082526 107 ntBASIC3.82□□□□□ -1.8
Ubfd1Q78JW9 Gm23443-201ENSMUST00000082916 128 ntBASIC3.82□□□□□ -1.8
Ubfd1Q78JW9 Mir30e-201ENSMUST00000083475 92 ntBASIC3.82□□□□□ -1.8
Ubfd1Q78JW9 Gm25518-201ENSMUST00000083864 107 ntBASIC3.82□□□□□ -1.8
Ubfd1Q78JW9 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Ubfd1Q78JW9 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Ubfd1Q78JW9 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Ubfd1Q78JW9 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Ubfd1Q78JW9 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Ubfd1Q78JW9 Gm37903-201ENSMUST00000192122 2381 ntBASIC3.81□□□□□ -1.8
Ubfd1Q78JW9 Gm37655-201ENSMUST00000193968 4123 ntBASIC3.81□□□□□ -1.8
Ubfd1Q78JW9 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Ubfd1Q78JW9 Gm23322-201ENSMUST00000104464 167 ntBASIC3.81□□□□□ -1.8
Ubfd1Q78JW9 Gm16428-201ENSMUST00000121193 723 ntBASIC3.81□□□□□ -1.8
Ubfd1Q78JW9 Gm15263-201ENSMUST00000121556 642 ntBASIC3.81□□□□□ -1.8
Ubfd1Q78JW9 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC3.81□□□□□ -1.8
Ubfd1Q78JW9 Gm23332-201ENSMUST00000157424 275 ntBASIC3.81□□□□□ -1.8
Ubfd1Q78JW9 Gm22080-201ENSMUST00000157591 106 ntBASIC3.81□□□□□ -1.8
Ubfd1Q78JW9 Gm17159-201ENSMUST00000169043 482 ntBASIC3.81□□□□□ -1.8
Ubfd1Q78JW9 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC3.81□□□□□ -1.8
Ubfd1Q78JW9 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC3.81□□□□□ -1.8
Ubfd1Q78JW9 Gm26779-201ENSMUST00000181101 551 ntTSL 2 BASIC3.81□□□□□ -1.8
Ubfd1Q78JW9 Gm26746-201ENSMUST00000181722 487 ntBASIC3.81□□□□□ -1.8
Ubfd1Q78JW9 Mir6363-201ENSMUST00000184880 114 ntBASIC3.81□□□□□ -1.8
Ubfd1Q78JW9 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.81□□□□□ -1.8
Ubfd1Q78JW9 n-TSaga9-201ENSMUST00000197675 107 ntBASIC3.81□□□□□ -1.8
Ubfd1Q78JW9 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC3.81□□□□□ -1.8
Ubfd1Q78JW9 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC3.81□□□□□ -1.8
Ubfd1Q78JW9 Gm45327-201ENSMUST00000211612 565 ntBASIC3.81□□□□□ -1.8
Ubfd1Q78JW9 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Ubfd1Q78JW9 Gpx8-201ENSMUST00000022282 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Ubfd1Q78JW9 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC3.81□□□□□ -1.8
Ubfd1Q78JW9 Gm23093-201ENSMUST00000083450 102 ntBASIC3.81□□□□□ -1.8
Ubfd1Q78JW9 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Ubfd1Q78JW9 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Ubfd1Q78JW9 Gm12374-201ENSMUST00000147108 3299 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Ubfd1Q78JW9 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Ubfd1Q78JW9 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Ubfd1Q78JW9 AC124346.2-201ENSMUST00000217986 5083 ntBASIC3.81□□□□□ -1.8
Ubfd1Q78JW9 1810006J02Rik-201ENSMUST00000186473 1687 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Ubfd1Q78JW9 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Ubfd1Q78JW9 AC122840.2-201ENSMUST00000221030 2659 ntBASIC3.8□□□□□ -1.8
Ubfd1Q78JW9 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Ubfd1Q78JW9 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Ubfd1Q78JW9 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Ubfd1Q78JW9 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Ubfd1Q78JW9 Gm24544-201ENSMUST00000103862 110 ntBASIC3.8□□□□□ -1.8
Ubfd1Q78JW9 Gm25765-201ENSMUST00000104100 132 ntBASIC3.8□□□□□ -1.8
Ubfd1Q78JW9 Gm25833-201ENSMUST00000104137 133 ntBASIC3.8□□□□□ -1.8
Ubfd1Q78JW9 Gm11874-201ENSMUST00000117437 130 ntBASIC3.8□□□□□ -1.8
Ubfd1Q78JW9 Gm15994-201ENSMUST00000118029 402 ntBASIC3.8□□□□□ -1.8
Ubfd1Q78JW9 Gm12806-201ENSMUST00000119384 268 ntBASIC3.8□□□□□ -1.8
Ubfd1Q78JW9 Gm15381-201ENSMUST00000121501 1156 ntBASIC3.8□□□□□ -1.8
Ubfd1Q78JW9 Gm14694-201ENSMUST00000121856 282 ntBASIC3.8□□□□□ -1.8
Ubfd1Q78JW9 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC3.8□□□□□ -1.8
Ubfd1Q78JW9 Gm23585-201ENSMUST00000157656 102 ntBASIC3.8□□□□□ -1.8
Ubfd1Q78JW9 Gm25456-201ENSMUST00000157952 109 ntBASIC3.8□□□□□ -1.8
Ubfd1Q78JW9 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC3.8□□□□□ -1.8
Ubfd1Q78JW9 Mir713-201ENSMUST00000178651 108 ntBASIC3.8□□□□□ -1.8
Ubfd1Q78JW9 Gm28924-201ENSMUST00000190012 241 ntBASIC3.8□□□□□ -1.8
Ubfd1Q78JW9 Gm29334-201ENSMUST00000190334 357 ntBASIC3.8□□□□□ -1.8
Ubfd1Q78JW9 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC3.8□□□□□ -1.8
Ubfd1Q78JW9 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC3.8□□□□□ -1.8
Ubfd1Q78JW9 Gm46193-201ENSMUST00000219399 364 ntBASIC3.8□□□□□ -1.8
Ubfd1Q78JW9 AC116465.1-201ENSMUST00000220324 235 ntBASIC3.8□□□□□ -1.8
Ubfd1Q78JW9 Gm3829-201ENSMUST00000222362 619 ntBASIC3.8□□□□□ -1.8
Ubfd1Q78JW9 Cycs-ps3-201ENSMUST00000223240 321 ntBASIC3.8□□□□□ -1.8
Ubfd1Q78JW9 Gm4017-201ENSMUST00000084813 338 ntBASIC3.8□□□□□ -1.8
Ubfd1Q78JW9 Gm8074-201ENSMUST00000095071 252 ntBASIC3.8□□□□□ -1.8
Ubfd1Q78JW9 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Ubfd1Q78JW9 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Ubfd1Q78JW9 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Ubfd1Q78JW9 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Ubfd1Q78JW9 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Ubfd1Q78JW9 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
Ubfd1Q78JW9 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Ubfd1Q78JW9 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Ubfd1Q78JW9 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC3.79□□□□□ -1.8
Ubfd1Q78JW9 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Ubfd1Q78JW9 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Ubfd1Q78JW9 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Ubfd1Q78JW9 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC3.79□□□□□ -1.8
Ubfd1Q78JW9 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC3.79□□□□□ -1.8
Ubfd1Q78JW9 Gm37204-201ENSMUST00000192389 3961 ntBASIC3.79□□□□□ -1.8
Ubfd1Q78JW9 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Ubfd1Q78JW9 Gm22472-201ENSMUST00000104115 134 ntBASIC3.79□□□□□ -1.8
Ubfd1Q78JW9 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Ubfd1Q78JW9 Gm14657-201ENSMUST00000117461 302 ntBASIC3.79□□□□□ -1.8
Ubfd1Q78JW9 Gm14890-201ENSMUST00000117660 676 ntBASIC3.79□□□□□ -1.8
Ubfd1Q78JW9 Gm15268-201ENSMUST00000118845 352 ntBASIC3.79□□□□□ -1.8
Ubfd1Q78JW9 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC3.79□□□□□ -1.8
Ubfd1Q78JW9 Gm22480-201ENSMUST00000122568 128 ntBASIC3.79□□□□□ -1.8
Ubfd1Q78JW9 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC3.79□□□□□ -1.8
Ubfd1Q78JW9 Gm24998-201ENSMUST00000157908 89 ntBASIC3.79□□□□□ -1.8
Ubfd1Q78JW9 Gm22501-201ENSMUST00000158981 127 ntBASIC3.79□□□□□ -1.8
Ubfd1Q78JW9 Vmn1r-ps9-201ENSMUST00000177047 358 ntBASIC3.79□□□□□ -1.8
Ubfd1Q78JW9 Gm4761-201ENSMUST00000178086 582 ntBASIC3.79□□□□□ -1.8
Ubfd1Q78JW9 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms