Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Ddx58Q6Q899 Gm21638-201ENSMUST00000179473 836 ntBASIC4.26□□□□□ -1.73
Ddx58Q6Q899 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Ddx58Q6Q899 Gm27599-201ENSMUST00000183758 174 ntBASIC4.26□□□□□ -1.73
Ddx58Q6Q899 Mir6382-201ENSMUST00000184055 110 ntBASIC4.26□□□□□ -1.73
Ddx58Q6Q899 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ddx58Q6Q899 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Ddx58Q6Q899 Gm37727-201ENSMUST00000191637 819 ntBASIC4.26□□□□□ -1.73
Ddx58Q6Q899 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC4.26□□□□□ -1.73
Ddx58Q6Q899 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC4.26□□□□□ -1.73
Ddx58Q6Q899 AC153506.2-201ENSMUST00000218051 257 ntBASIC4.26□□□□□ -1.73
Ddx58Q6Q899 AC142499.1-201ENSMUST00000220036 374 ntBASIC4.26□□□□□ -1.73
Ddx58Q6Q899 AC102575.1-201ENSMUST00000225348 547 ntBASIC4.26□□□□□ -1.73
Ddx58Q6Q899 CT009604.2-201ENSMUST00000225531 377 ntBASIC4.26□□□□□ -1.73
Ddx58Q6Q899 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Ddx58Q6Q899 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Ddx58Q6Q899 Olfr44-202ENSMUST00000215065 3578 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Ddx58Q6Q899 Gm3584-201ENSMUST00000173822 2565 ntBASIC4.26□□□□□ -1.73
Ddx58Q6Q899 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Ddx58Q6Q899 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Ddx58Q6Q899 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ddx58Q6Q899 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Ddx58Q6Q899 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ddx58Q6Q899 Gm22497-201ENSMUST00000104499 131 ntBASIC4.25□□□□□ -1.73
Ddx58Q6Q899 Gm15231-201ENSMUST00000119174 447 ntBASIC4.25□□□□□ -1.73
Ddx58Q6Q899 Gm23887-201ENSMUST00000122683 172 ntBASIC4.25□□□□□ -1.73
Ddx58Q6Q899 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC4.25□□□□□ -1.73
Ddx58Q6Q899 Gm26100-201ENSMUST00000157245 127 ntBASIC4.25□□□□□ -1.73
Ddx58Q6Q899 Gm24393-201ENSMUST00000158135 97 ntBASIC4.25□□□□□ -1.73
Ddx58Q6Q899 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Ddx58Q6Q899 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC4.25□□□□□ -1.73
Ddx58Q6Q899 Gm23619-201ENSMUST00000178411 94 ntBASIC4.25□□□□□ -1.73
Ddx58Q6Q899 Gm25474-201ENSMUST00000179052 94 ntBASIC4.25□□□□□ -1.73
Ddx58Q6Q899 Gm22047-201ENSMUST00000179176 94 ntBASIC4.25□□□□□ -1.73
Ddx58Q6Q899 Gm27445-201ENSMUST00000184484 72 ntBASIC4.25□□□□□ -1.73
Ddx58Q6Q899 Mir6715-201ENSMUST00000184990 57 ntBASIC4.25□□□□□ -1.73
Ddx58Q6Q899 Gm28594-201ENSMUST00000187022 661 ntBASIC4.25□□□□□ -1.73
Ddx58Q6Q899 Gm36984-201ENSMUST00000192770 235 ntBASIC4.25□□□□□ -1.73
Ddx58Q6Q899 Gm43227-201ENSMUST00000202239 677 ntBASIC4.25□□□□□ -1.73
Ddx58Q6Q899 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC4.25□□□□□ -1.73
Ddx58Q6Q899 Gm39147-201ENSMUST00000211376 465 ntBASIC4.25□□□□□ -1.73
Ddx58Q6Q899 Gm45826-201ENSMUST00000212226 265 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ddx58Q6Q899 AC116726.2-201ENSMUST00000217629 986 ntBASIC4.25□□□□□ -1.73
Ddx58Q6Q899 Gm20304-201ENSMUST00000218168 444 ntBASIC4.25□□□□□ -1.73
Ddx58Q6Q899 Gm35405-201ENSMUST00000218754 400 ntBASIC4.25□□□□□ -1.73
Ddx58Q6Q899 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC4.25□□□□□ -1.73
Ddx58Q6Q899 AC124489.2-201ENSMUST00000223930 589 ntBASIC4.25□□□□□ -1.73
Ddx58Q6Q899 AC167669.1-201ENSMUST00000224932 384 ntBASIC4.25□□□□□ -1.73
Ddx58Q6Q899 AC118639.1-201ENSMUST00000227204 338 ntBASIC4.25□□□□□ -1.73
Ddx58Q6Q899 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ddx58Q6Q899 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ddx58Q6Q899 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Ddx58Q6Q899 Gm6207-201ENSMUST00000120075 1386 ntBASIC4.25□□□□□ -1.73
Ddx58Q6Q899 Gm6228-201ENSMUST00000178856 1386 ntBASIC4.25□□□□□ -1.73
Ddx58Q6Q899 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
Ddx58Q6Q899 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ddx58Q6Q899 Gm38286-201ENSMUST00000195128 3105 ntBASIC4.24□□□□□ -1.73
Ddx58Q6Q899 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Ddx58Q6Q899 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ddx58Q6Q899 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Ddx58Q6Q899 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Ddx58Q6Q899 Gm26387-201ENSMUST00000104238 132 ntBASIC4.24□□□□□ -1.73
Ddx58Q6Q899 Gm23532-201ENSMUST00000104569 112 ntBASIC4.24□□□□□ -1.73
Ddx58Q6Q899 Mir465c-2-201ENSMUST00000104757 81 ntBASIC4.24□□□□□ -1.73
Ddx58Q6Q899 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC4.24□□□□□ -1.73
Ddx58Q6Q899 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Ddx58Q6Q899 Gm28959-201ENSMUST00000186713 551 ntTSL 5 BASIC4.24□□□□□ -1.73
Ddx58Q6Q899 Gm6651-201ENSMUST00000189471 271 ntBASIC4.24□□□□□ -1.73
Ddx58Q6Q899 Gm18540-201ENSMUST00000204025 526 ntBASIC4.24□□□□□ -1.73
Ddx58Q6Q899 Gm45400-201ENSMUST00000211603 653 ntBASIC4.24□□□□□ -1.73
Ddx58Q6Q899 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC4.24□□□□□ -1.73
Ddx58Q6Q899 AL669916.3-201ENSMUST00000213855 94 ntBASIC4.24□□□□□ -1.73
Ddx58Q6Q899 AL669916.6-201ENSMUST00000214610 94 ntBASIC4.24□□□□□ -1.73
Ddx58Q6Q899 AL669916.4-201ENSMUST00000215976 94 ntBASIC4.24□□□□□ -1.73
Ddx58Q6Q899 AL669916.1-201ENSMUST00000217640 94 ntBASIC4.24□□□□□ -1.73
Ddx58Q6Q899 AC112274.2-201ENSMUST00000218436 170 ntBASIC4.24□□□□□ -1.73
Ddx58Q6Q899 Gm20474-202ENSMUST00000220772 462 ntTSL 5 BASIC4.24□□□□□ -1.73
Ddx58Q6Q899 AC108416.2-201ENSMUST00000226792 367 ntBASIC4.24□□□□□ -1.73
Ddx58Q6Q899 Gm9765-201ENSMUST00000043170 321 ntBASIC4.24□□□□□ -1.73
Ddx58Q6Q899 Gm22810-201ENSMUST00000082741 158 ntBASIC4.24□□□□□ -1.73
Ddx58Q6Q899 Mir465c-1-201ENSMUST00000093560 81 ntBASIC4.24□□□□□ -1.73
Ddx58Q6Q899 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC4.24□□□□□ -1.73
Ddx58Q6Q899 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
Ddx58Q6Q899 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Ddx58Q6Q899 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Ddx58Q6Q899 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Ddx58Q6Q899 Gm24376-201ENSMUST00000104399 127 ntBASIC4.23□□□□□ -1.73
Ddx58Q6Q899 Gm13511-201ENSMUST00000121167 363 ntBASIC4.23□□□□□ -1.73
Ddx58Q6Q899 Gm25784-201ENSMUST00000122524 81 ntBASIC4.23□□□□□ -1.73
Ddx58Q6Q899 Gm26020-201ENSMUST00000122729 183 ntBASIC4.23□□□□□ -1.73
Ddx58Q6Q899 1700036O09Rik-201ENSMUST00000136834 349 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Ddx58Q6Q899 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC4.23□□□□□ -1.73
Ddx58Q6Q899 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC4.23□□□□□ -1.73
Ddx58Q6Q899 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC4.23□□□□□ -1.73
Ddx58Q6Q899 Gm23152-201ENSMUST00000175322 116 ntBASIC4.23□□□□□ -1.73
Ddx58Q6Q899 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Ddx58Q6Q899 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Ddx58Q6Q899 Ifi213-205ENSMUST00000180215 643 ntAPPRIS P2 TSL 3 BASIC4.23□□□□□ -1.73
Ddx58Q6Q899 Gm26991-201ENSMUST00000180950 620 ntBASIC4.23□□□□□ -1.73
Ddx58Q6Q899 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms