Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Gm11623-201ENSMUST00000120176 1225 ntBASIC4.4□□□□□ -1.71
Scaf4Q6PFF0 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC4.4□□□□□ -1.71
Scaf4Q6PFF0 Gm13345-201ENSMUST00000121928 228 ntBASIC4.4□□□□□ -1.71
Scaf4Q6PFF0 Gm12785-201ENSMUST00000122052 172 ntBASIC4.4□□□□□ -1.71
Scaf4Q6PFF0 Gm22345-201ENSMUST00000122644 107 ntBASIC4.4□□□□□ -1.71
Scaf4Q6PFF0 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC4.4□□□□□ -1.71
Scaf4Q6PFF0 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC4.4□□□□□ -1.71
Scaf4Q6PFF0 Gm15767-202ENSMUST00000153786 544 ntTSL 3 BASIC4.4□□□□□ -1.71
Scaf4Q6PFF0 Gm25425-201ENSMUST00000157611 96 ntBASIC4.4□□□□□ -1.71
Scaf4Q6PFF0 Gm16353-201ENSMUST00000159458 1223 ntBASIC4.4□□□□□ -1.71
Scaf4Q6PFF0 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC4.4□□□□□ -1.71
Scaf4Q6PFF0 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC4.4□□□□□ -1.71
Scaf4Q6PFF0 Gm35931-201ENSMUST00000203931 448 ntBASIC4.4□□□□□ -1.71
Scaf4Q6PFF0 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC4.4□□□□□ -1.71
Scaf4Q6PFF0 Gm45032-201ENSMUST00000205375 520 ntBASIC4.4□□□□□ -1.71
Scaf4Q6PFF0 AC152062.1-201ENSMUST00000218129 386 ntBASIC4.4□□□□□ -1.71
Scaf4Q6PFF0 AC129202.3-201ENSMUST00000224413 733 ntBASIC4.4□□□□□ -1.71
Scaf4Q6PFF0 Snord47-201ENSMUST00000083034 77 ntBASIC4.4□□□□□ -1.71
Scaf4Q6PFF0 Mir188-201ENSMUST00000083464 68 ntBASIC4.4□□□□□ -1.71
Scaf4Q6PFF0 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Scaf4Q6PFF0 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
Scaf4Q6PFF0 Gm44860-201ENSMUST00000208473 2346 ntBASIC4.4□□□□□ -1.71
Scaf4Q6PFF0 Gm44925-201ENSMUST00000208879 2110 ntBASIC4.4□□□□□ -1.71
Scaf4Q6PFF0 Gm38152-201ENSMUST00000195389 3566 ntBASIC4.4□□□□□ -1.71
Scaf4Q6PFF0 Gm45033-201ENSMUST00000206710 3167 ntBASIC4.4□□□□□ -1.71
Scaf4Q6PFF0 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
Scaf4Q6PFF0 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Scaf4Q6PFF0 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Scaf4Q6PFF0 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Scaf4Q6PFF0 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Scaf4Q6PFF0 Gm37899-201ENSMUST00000193116 8717 ntBASIC4.39□□□□□ -1.71
Scaf4Q6PFF0 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.39□□□□□ -1.71
Scaf4Q6PFF0 Dnase2b-201ENSMUST00000029836 2566 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Scaf4Q6PFF0 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Scaf4Q6PFF0 Gm13355-201ENSMUST00000117996 317 ntBASIC4.39□□□□□ -1.71
Scaf4Q6PFF0 Gm3267-201ENSMUST00000118671 473 ntBASIC4.39□□□□□ -1.71
Scaf4Q6PFF0 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC4.39□□□□□ -1.71
Scaf4Q6PFF0 Gm12512-201ENSMUST00000119620 217 ntBASIC4.39□□□□□ -1.71
Scaf4Q6PFF0 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC4.39□□□□□ -1.71
Scaf4Q6PFF0 Gm26153-201ENSMUST00000157433 127 ntBASIC4.39□□□□□ -1.71
Scaf4Q6PFF0 Mir1946a-201ENSMUST00000158360 134 ntBASIC4.39□□□□□ -1.71
Scaf4Q6PFF0 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Scaf4Q6PFF0 Gm8114-201ENSMUST00000172225 484 ntBASIC4.39□□□□□ -1.71
Scaf4Q6PFF0 Vmn2r-ps6-201ENSMUST00000176317 1101 ntBASIC4.39□□□□□ -1.71
Scaf4Q6PFF0 Gm28860-201ENSMUST00000188103 313 ntBASIC4.39□□□□□ -1.71
Scaf4Q6PFF0 Gm6059-201ENSMUST00000196903 340 ntBASIC4.39□□□□□ -1.71
Scaf4Q6PFF0 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC4.39□□□□□ -1.71
Scaf4Q6PFF0 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC4.39□□□□□ -1.71
Scaf4Q6PFF0 Gm45879-201ENSMUST00000212521 392 ntBASIC4.39□□□□□ -1.71
Scaf4Q6PFF0 AC152979.1-201ENSMUST00000218214 289 ntBASIC4.39□□□□□ -1.71
Scaf4Q6PFF0 AC130222.1-201ENSMUST00000221198 256 ntBASIC4.39□□□□□ -1.71
Scaf4Q6PFF0 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC4.39□□□□□ -1.71
Scaf4Q6PFF0 AC173482.5-201ENSMUST00000224181 327 ntBASIC4.39□□□□□ -1.71
Scaf4Q6PFF0 AC118639.1-201ENSMUST00000227204 338 ntBASIC4.39□□□□□ -1.71
Scaf4Q6PFF0 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Scaf4Q6PFF0 Gm25801-201ENSMUST00000082638 106 ntBASIC4.39□□□□□ -1.71
Scaf4Q6PFF0 Gm5670-201ENSMUST00000093546 372 ntBASIC4.39□□□□□ -1.71
Scaf4Q6PFF0 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.39□□□□□ -1.71
Scaf4Q6PFF0 Olfr136-203ENSMUST00000208539 1773 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
Scaf4Q6PFF0 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Scaf4Q6PFF0 Gm37192-201ENSMUST00000194479 1348 ntBASIC4.39□□□□□ -1.71
Scaf4Q6PFF0 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Scaf4Q6PFF0 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Scaf4Q6PFF0 Olfr1353-203ENSMUST00000205193 1924 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Scaf4Q6PFF0 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Scaf4Q6PFF0 Olfr992-203ENSMUST00000214895 2222 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
Scaf4Q6PFF0 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Scaf4Q6PFF0 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Scaf4Q6PFF0 Svet1-201ENSMUST00000209370 3940 ntBASIC4.38□□□□□ -1.71
Scaf4Q6PFF0 Gm42552-201ENSMUST00000196754 4497 ntBASIC4.38□□□□□ -1.71
Scaf4Q6PFF0 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Scaf4Q6PFF0 Gm15084-201ENSMUST00000178585 1502 ntBASIC4.38□□□□□ -1.71
Scaf4Q6PFF0 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Scaf4Q6PFF0 Gm15195-201ENSMUST00000118775 263 ntBASIC4.38□□□□□ -1.71
Scaf4Q6PFF0 Gm6062-201ENSMUST00000120462 631 ntBASIC4.38□□□□□ -1.71
Scaf4Q6PFF0 Gm14303-201ENSMUST00000121320 171 ntBASIC4.38□□□□□ -1.71
Scaf4Q6PFF0 Gm24060-201ENSMUST00000157494 95 ntBASIC4.38□□□□□ -1.71
Scaf4Q6PFF0 Gm7335-201ENSMUST00000172475 373 ntBASIC4.38□□□□□ -1.71
Scaf4Q6PFF0 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC4.38□□□□□ -1.71
Scaf4Q6PFF0 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC4.38□□□□□ -1.71
Scaf4Q6PFF0 Gm5368-201ENSMUST00000189012 589 ntBASIC4.38□□□□□ -1.71
Scaf4Q6PFF0 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC4.38□□□□□ -1.71
Scaf4Q6PFF0 Gm44474-201ENSMUST00000196525 127 ntBASIC4.38□□□□□ -1.71
Scaf4Q6PFF0 Gm43724-201ENSMUST00000197516 226 ntBASIC4.38□□□□□ -1.71
Scaf4Q6PFF0 Gm19908-201ENSMUST00000204684 391 ntBASIC4.38□□□□□ -1.71
Scaf4Q6PFF0 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.38□□□□□ -1.71
Scaf4Q6PFF0 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Scaf4Q6PFF0 n-R5s173-201ENSMUST00000082620 119 ntBASIC4.38□□□□□ -1.71
Scaf4Q6PFF0 Gm23677-201ENSMUST00000083156 104 ntBASIC4.38□□□□□ -1.71
Scaf4Q6PFF0 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Scaf4Q6PFF0 Mir496a-201ENSMUST00000093627 79 ntBASIC4.38□□□□□ -1.71
Scaf4Q6PFF0 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Scaf4Q6PFF0 Gm44668-201ENSMUST00000207911 3265 ntBASIC4.38□□□□□ -1.71
Scaf4Q6PFF0 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Scaf4Q6PFF0 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Scaf4Q6PFF0 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Scaf4Q6PFF0 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
Scaf4Q6PFF0 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
Scaf4Q6PFF0 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC4.37□□□□□ -1.71
Scaf4Q6PFF0 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 111.3 ms