Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC12.86□□□□□ -0.352e-8■□□□□ 10.3
PRPF8Q6P2Q9 PPP2R1B-211ENST00000534500 582 ntTSL 212.19□□□□□ -0.462e-8■□□□□ 10.3
PRPF8Q6P2Q9 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC10.3□□□□□ -0.762e-8■□□□□ 10.3
PRPF8Q6P2Q9 PPP2R1B-202ENST00000341980 1953 ntTSL 2 BASIC9.79□□□□□ -0.842e-8■□□□□ 10.3
PRPF8Q6P2Q9 PPP2R1B-212ENST00000534521 2294 ntTSL 28.16□□□□□ -1.12e-8■□□□□ 10.3
PRPF8Q6P2Q9 PPP2R1B-206ENST00000527614 5587 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.252e-8■□□□□ 10.3
PRPF8Q6P2Q9 PPP2R1B-201ENST00000311129 2082 ntAPPRIS P4 TSL 1 (best) BASIC6.91□□□□□ -1.32e-8■□□□□ 10.3
PRPF8Q6P2Q9 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.172e-7■□□□□ 10.3
PRPF8Q6P2Q9 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC9.35□□□□□ -0.912e-7■□□□□ 10.3
PRPF8Q6P2Q9 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.497e-7■□□□□ 10.3
PRPF8Q6P2Q9 S100PBP-202ENST00000373475 4322 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.997e-7■□□□□ 10.3
PRPF8Q6P2Q9 VCP-205ENST00000479300 559 ntTSL 1 (best)5.93□□□□□ -1.467e-12■□□□□ 10.3
PRPF8Q6P2Q9 RBM5-204ENST00000417905 427 ntTSL 54.32□□□□□ -1.723e-8■□□□□ 10.3
PRPF8Q6P2Q9 RBM5-206ENST00000437500 582 ntTSL 43.98□□□□□ -1.773e-8■□□□□ 10.3
PRPF8Q6P2Q9 SLC22A31-203ENST00000563595 780 ntTSL 320.82■□□□□ 0.922e-12■□□□□ 10.3
PRPF8Q6P2Q9 PRPSAP1-210ENST00000586137 473 ntTSL 38.49□□□□□ -1.051e-12■□□□□ 10.3
PRPF8Q6P2Q9 COQ8B-217ENST00000601967 735 ntTSL 315.55■□□□□ 0.081e-9■□□□□ 10.3
PRPF8Q6P2Q9 COQ8B-216ENST00000601451 1949 ntTSL 214.94□□□□□ -0.021e-9■□□□□ 10.3
PRPF8Q6P2Q9 COQ8B-213ENST00000600080 473 ntTSL 514.83□□□□□ -0.041e-9■□□□□ 10.3
PRPF8Q6P2Q9 C16orf58-207ENST00000567578 636 ntTSL 418.22■□□□□ 0.511e-6■□□□□ 10.3
PRPF8Q6P2Q9 C16orf58-204ENST00000564807 555 ntTSL 410.7□□□□□ -0.71e-6■□□□□ 10.3
PRPF8Q6P2Q9 NFKBIZ-204ENST00000461724 1338 ntTSL 519.9■□□□□ 0.782e-12■□□□□ 10.3
PRPF8Q6P2Q9 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC19.72■□□□□ 0.753e-9■□□□□ 10.3
PRPF8Q6P2Q9 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.42■□□□□ 0.543e-9■□□□□ 10.3
PRPF8Q6P2Q9 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.533e-9■□□□□ 10.3
PRPF8Q6P2Q9 LRP3-202ENST00000590275 1078 ntTSL 218.04■□□□□ 0.483e-6■□□□□ 10.3
PRPF8Q6P2Q9 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.472e-6■□□□□ 10.3
PRPF8Q6P2Q9 PTP4A3-205ENST00000523147 558 ntTSL 517.84■□□□□ 0.452e-6■□□□□ 10.3
PRPF8Q6P2Q9 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.382e-6■□□□□ 10.3
PRPF8Q6P2Q9 ASNS-204ENST00000414884 584 ntTSL 216.56■□□□□ 0.245e-11■□□□□ 10.3
PRPF8Q6P2Q9 CLDND1-217ENST00000508071 556 ntTSL 415.98■□□□□ 0.152e-6■□□□□ 10.3
PRPF8Q6P2Q9 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.84■□□□□ 0.133e-9■□□□□ 10.3
PRPF8Q6P2Q9 JAGN1-202ENST00000489724 342 ntTSL 315.41■□□□□ 0.062e-6■□□□□ 10.3
PRPF8Q6P2Q9 CLDND1-207ENST00000502980 778 ntTSL 214.64□□□□□ -0.072e-6■□□□□ 10.3
PRPF8Q6P2Q9 CLDND1-209ENST00000503621 539 ntTSL 414.64□□□□□ -0.072e-6■□□□□ 10.3
PRPF8Q6P2Q9 FASN-210ENST00000636968 100 ntTSL 514.41□□□□□ -0.13e-32■□□□□ 10.3
PRPF8Q6P2Q9 SERPINF1-204ENST00000571149 431 ntTSL 314.34□□□□□ -0.113e-19■□□□□ 10.3
PRPF8Q6P2Q9 CLDND1-219ENST00000508659 681 ntTSL 314.24□□□□□ -0.132e-6■□□□□ 10.3
PRPF8Q6P2Q9 ETV4-207ENST00000586764 581 ntTSL 313.48□□□□□ -0.252e-35■□□□□ 10.3
PRPF8Q6P2Q9 SMG9-213ENST00000602222 650 ntTSL 413.15□□□□□ -0.32e-6■□□□□ 10.3
PRPF8Q6P2Q9 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.382e-6■□□□□ 10.3
PRPF8Q6P2Q9 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.392e-6■□□□□ 10.3
PRPF8Q6P2Q9 TMEM94-228ENST00000583296 569 ntTSL 212.56□□□□□ -0.42e-6■□□□□ 10.3
PRPF8Q6P2Q9 ETV4-209ENST00000587151 582 ntTSL 512.1□□□□□ -0.472e-35■□□□□ 10.3
PRPF8Q6P2Q9 DNM2-219ENST00000591818 538 ntTSL 411.61□□□□□ -0.553e-10■□□□□ 10.3
PRPF8Q6P2Q9 TMEM94-227ENST00000583071 581 ntTSL 310.84□□□□□ -0.672e-6■□□□□ 10.3
PRPF8Q6P2Q9 REC8-205ENST00000559939 494 ntTSL 210.33□□□□□ -0.763e-9■□□□□ 10.3
PRPF8Q6P2Q9 DNM2-221ENST00000593203 2507 ntTSL 29.88□□□□□ -0.833e-10■□□□□ 10.3
PRPF8Q6P2Q9 REC8-203ENST00000558381 405 ntTSL 29.55□□□□□ -0.883e-9■□□□□ 10.3
PRPF8Q6P2Q9 FASN-211ENST00000637026 100 ntTSL 59.37□□□□□ -0.913e-32■□□□□ 10.3
PRPF8Q6P2Q9 FADS2-207ENST00000520145 428 ntTSL 39.27□□□□□ -0.922e-6■□□□□ 10.3
PRPF8Q6P2Q9 KDM6B-204ENST00000571047 362 ntTSL 59.22□□□□□ -0.932e-8■□□□□ 10.3
PRPF8Q6P2Q9 SERPINA5-212ENST00000556775 829 ntTSL 59.02□□□□□ -0.972e-10■□□□□ 10.3
PRPF8Q6P2Q9 SERPINA5-207ENST00000554760 1113 ntTSL 28.82□□□□□ -12e-10■□□□□ 10.3
PRPF8Q6P2Q9 SH3D21-206ENST00000508854 1134 ntTSL 58.79□□□□□ -12e-6■□□□□ 10.3
PRPF8Q6P2Q9 SERPINA5-203ENST00000553780 2071 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.022e-10■□□□□ 10.3
PRPF8Q6P2Q9 DNM2-213ENST00000589106 565 ntTSL 28.47□□□□□ -1.053e-10■□□□□ 10.3
PRPF8Q6P2Q9 SERPINA5-208ENST00000554866 2211 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.092e-10■□□□□ 10.3
PRPF8Q6P2Q9 SERPINA5-211ENST00000556730 1463 ntTSL 28.24□□□□□ -1.092e-10■□□□□ 10.3
PRPF8Q6P2Q9 SERPINA5-201ENST00000329597 2337 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.142e-10■□□□□ 10.3
PRPF8Q6P2Q9 CLDND1-229ENST00000513988 598 ntTSL 27.52□□□□□ -1.212e-6■□□□□ 10.3
PRPF8Q6P2Q9 FASN-208ENST00000635733 100 ntTSL 57.3□□□□□ -1.243e-32■□□□□ 10.3
PRPF8Q6P2Q9 FADS2-208ENST00000521571 799 ntTSL 35.75□□□□□ -1.492e-6■□□□□ 10.3
PRPF8Q6P2Q9 CPOX-203ENST00000512905 593 ntTSL 52.35□□□□□ -2.032e-6■□□□□ 10.3
PRPF8Q6P2Q9 CLDND1-210ENST00000503799 569 ntTSL 51.68□□□□□ -2.142e-6■□□□□ 10.3
PRPF8Q6P2Q9 DICER1-215ENST00000556681 310 ntTSL 3-1.52□□□□□ -2.652e-6■□□□□ 10.3
PRPF8Q6P2Q9 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.214e-6■□□□□ 10.3
PRPF8Q6P2Q9 AC010997.3-201ENST00000418818 502 ntTSL 3 BASIC10.44□□□□□ -0.744e-6■□□□□ 10.3
PRPF8Q6P2Q9 MCEE-205ENST00000494660 836 ntTSL 217.55■□□□□ 0.42e-7■□□□□ 10.3
PRPF8Q6P2Q9 MCEE-201ENST00000244217 835 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.82e-7■□□□□ 10.3
PRPF8Q6P2Q9 MCEE-204ENST00000486135 499 ntTSL 38.6□□□□□ -1.032e-7■□□□□ 10.3
PRPF8Q6P2Q9 MIR6727-201ENST00000620702 65 ntBASIC12.84□□□□□ -0.353e-7■□□□□ 10.3
PRPF8Q6P2Q9 RASGRP4-211ENST00000589100 2303 ntTSL 512.61□□□□□ -0.392e-6■□□□□ 10.3
PRPF8Q6P2Q9 RASGRP4-209ENST00000588404 2749 ntTSL 510.15□□□□□ -0.782e-6■□□□□ 10.3
PRPF8Q6P2Q9 RASGRP4-212ENST00000589358 2634 ntTSL 510.04□□□□□ -0.82e-6■□□□□ 10.3
PRPF8Q6P2Q9 RASGRP4-213ENST00000589474 2592 ntTSL 59.98□□□□□ -0.812e-6■□□□□ 10.3
PRPF8Q6P2Q9 RASGRP4-208ENST00000587753 3011 ntTSL 1 (best) BASIC9.92□□□□□ -0.822e-6■□□□□ 10.3
PRPF8Q6P2Q9 RASGRP4-207ENST00000587738 2293 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.862e-6■□□□□ 10.3
PRPF8Q6P2Q9 RASGRP4-215ENST00000614135 2942 ntTSL 5 BASIC9.36□□□□□ -0.912e-6■□□□□ 10.3
PRPF8Q6P2Q9 RASGRP4-218ENST00000617966 2927 ntTSL 5 BASIC9.36□□□□□ -0.912e-6■□□□□ 10.3
PRPF8Q6P2Q9 RASGRP4-201ENST00000293062 2926 ntTSL 1 (best) BASIC9.36□□□□□ -0.912e-6■□□□□ 10.3
PRPF8Q6P2Q9 RASGRP4-203ENST00000433821 2941 ntTSL 1 (best) BASIC9.36□□□□□ -0.912e-6■□□□□ 10.3
PRPF8Q6P2Q9 RASGRP4-202ENST00000426920 2650 ntTSL 1 (best) BASIC8.83□□□□□ -12e-6■□□□□ 10.3
PRPF8Q6P2Q9 RASGRP4-220ENST00000622174 2651 ntTSL 5 BASIC8.83□□□□□ -12e-6■□□□□ 10.3
PRPF8Q6P2Q9 RASGRP4-205ENST00000586305 3061 ntTSL 1 (best) BASIC8.78□□□□□ -12e-6■□□□□ 10.3
PRPF8Q6P2Q9 RASGRP4-204ENST00000454404 3116 ntTSL 1 (best) BASIC8.7□□□□□ -1.022e-6■□□□□ 10.3
PRPF8Q6P2Q9 RASGRP4-214ENST00000592322 3313 ntTSL 58.68□□□□□ -1.022e-6■□□□□ 10.3
PRPF8Q6P2Q9 RASGRP4-219ENST00000618320 3313 ntTSL 2 BASIC8.68□□□□□ -1.022e-6■□□□□ 10.3
PRPF8Q6P2Q9 RASGRP4-217ENST00000615439 3217 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.052e-6■□□□□ 10.3
PRPF8Q6P2Q9 RASGRP4-216ENST00000615340 4074 ntTSL 57.91□□□□□ -1.142e-6■□□□□ 10.3
PRPF8Q6P2Q9 SNX22-205ENST00000560945 1807 ntTSL 1 (best)17.84■□□□□ 0.454e-10■□□□□ 10.3
PRPF8Q6P2Q9 SNX22-203ENST00000558466 1353 ntTSL 515.92■□□□□ 0.144e-10■□□□□ 10.3
PRPF8Q6P2Q9 SNX22-204ENST00000560607 1182 ntTSL 214.35□□□□□ -0.114e-10■□□□□ 10.3
PRPF8Q6P2Q9 SNX22-207ENST00000561334 2789 ntTSL 212.52□□□□□ -0.44e-10■□□□□ 10.3
PRPF8Q6P2Q9 SNX22-201ENST00000325881 3614 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.714e-10■□□□□ 10.3
PRPF8Q6P2Q9 SNX22-202ENST00000557789 3713 ntTSL 510.37□□□□□ -0.754e-10■□□□□ 10.3
PRPF8Q6P2Q9 DCAF11-218ENST00000559144 1011 ntTSL 211.4□□□□□ -0.592e-6■□□□□ 10.3
PRPF8Q6P2Q9 SLC43A3-224ENST00000533245 589 ntTSL 516.02■□□□□ 0.164e-8■□□□□ 10.3
PRPF8Q6P2Q9 SLC43A3-207ENST00000526125 554 ntTSL 516.02■□□□□ 0.164e-8■□□□□ 10.3
PRPF8Q6P2Q9 SLC43A3-213ENST00000529494 560 ntTSL 415.87■□□□□ 0.134e-8■□□□□ 10.3
Retrieved 100 of 73,762 protein–RNA pairs in 658.5 ms