Protein–RNA interactions for Protein: Q6NVF9

Cpsf6, Cleavage and polyadenylation specificity factor subunit 6, mousemouse

Known RBP Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf6Q6NVF9 Gm25577-201ENSMUST00000083414 107 ntBASIC4.5□□□□□ -1.69
Cpsf6Q6NVF9 Gm24414-201ENSMUST00000083434 107 ntBASIC4.5□□□□□ -1.69
Cpsf6Q6NVF9 Gm24861-201ENSMUST00000083459 107 ntBASIC4.5□□□□□ -1.69
Cpsf6Q6NVF9 Gm24803-201ENSMUST00000083693 107 ntBASIC4.5□□□□□ -1.69
Cpsf6Q6NVF9 Gm23103-201ENSMUST00000083725 107 ntBASIC4.5□□□□□ -1.69
Cpsf6Q6NVF9 Gm22580-201ENSMUST00000083727 107 ntBASIC4.5□□□□□ -1.69
Cpsf6Q6NVF9 Gm24260-201ENSMUST00000083741 107 ntBASIC4.5□□□□□ -1.69
Cpsf6Q6NVF9 Gm23732-201ENSMUST00000083751 107 ntBASIC4.5□□□□□ -1.69
Cpsf6Q6NVF9 Gm22682-201ENSMUST00000083854 107 ntBASIC4.5□□□□□ -1.69
Cpsf6Q6NVF9 Gm25869-201ENSMUST00000083855 107 ntBASIC4.5□□□□□ -1.69
Cpsf6Q6NVF9 Gm24693-201ENSMUST00000083885 107 ntBASIC4.5□□□□□ -1.69
Cpsf6Q6NVF9 Gm26317-201ENSMUST00000083894 107 ntBASIC4.5□□□□□ -1.69
Cpsf6Q6NVF9 Gm24448-201ENSMUST00000083979 107 ntBASIC4.5□□□□□ -1.69
Cpsf6Q6NVF9 Gm22798-201ENSMUST00000083992 107 ntBASIC4.5□□□□□ -1.69
Cpsf6Q6NVF9 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC4.5□□□□□ -1.69
Cpsf6Q6NVF9 n-R5s152-201ENSMUST00000093641 119 ntBASIC4.5□□□□□ -1.69
Cpsf6Q6NVF9 Gm26427-201ENSMUST00000093648 107 ntBASIC4.5□□□□□ -1.69
Cpsf6Q6NVF9 Gm22886-201ENSMUST00000093714 107 ntBASIC4.5□□□□□ -1.69
Cpsf6Q6NVF9 Gm22170-201ENSMUST00000097247 107 ntBASIC4.5□□□□□ -1.69
Cpsf6Q6NVF9 Olfr59-201ENSMUST00000143976 3088 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
Cpsf6Q6NVF9 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Cpsf6Q6NVF9 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Cpsf6Q6NVF9 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Cpsf6Q6NVF9 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Cpsf6Q6NVF9 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Cpsf6Q6NVF9 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Cpsf6Q6NVF9 Olfr1058-202ENSMUST00000213998 1710 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Cpsf6Q6NVF9 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.49□□□□□ -1.69
Cpsf6Q6NVF9 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Cpsf6Q6NVF9 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
Cpsf6Q6NVF9 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Cpsf6Q6NVF9 Gm25875-201ENSMUST00000104323 107 ntBASIC4.49□□□□□ -1.69
Cpsf6Q6NVF9 Gm15670-201ENSMUST00000117740 447 ntBASIC4.49□□□□□ -1.69
Cpsf6Q6NVF9 Gm15297-201ENSMUST00000117795 290 ntBASIC4.49□□□□□ -1.69
Cpsf6Q6NVF9 Gm15603-201ENSMUST00000119252 492 ntBASIC4.49□□□□□ -1.69
Cpsf6Q6NVF9 Gm11600-201ENSMUST00000119592 240 ntBASIC4.49□□□□□ -1.69
Cpsf6Q6NVF9 Gm6574-201ENSMUST00000120037 362 ntBASIC4.49□□□□□ -1.69
Cpsf6Q6NVF9 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC4.49□□□□□ -1.69
Cpsf6Q6NVF9 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC4.49□□□□□ -1.69
Cpsf6Q6NVF9 Gm26098-201ENSMUST00000157247 288 ntBASIC4.49□□□□□ -1.69
Cpsf6Q6NVF9 Gm23209-201ENSMUST00000158667 110 ntBASIC4.49□□□□□ -1.69
Cpsf6Q6NVF9 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC4.49□□□□□ -1.69
Cpsf6Q6NVF9 Gm20428-201ENSMUST00000174365 283 ntBASIC4.49□□□□□ -1.69
Cpsf6Q6NVF9 Mir7235-201ENSMUST00000183796 56 ntBASIC4.49□□□□□ -1.69
Cpsf6Q6NVF9 Gm9320-201ENSMUST00000184151 473 ntBASIC4.49□□□□□ -1.69
Cpsf6Q6NVF9 Gm8242-202ENSMUST00000193056 475 ntBASIC4.49□□□□□ -1.69
Cpsf6Q6NVF9 Ighv1-6-201ENSMUST00000193849 293 ntBASIC4.49□□□□□ -1.69
Cpsf6Q6NVF9 Trbv11-201ENSMUST00000194354 260 ntBASIC4.49□□□□□ -1.69
Cpsf6Q6NVF9 Gm43600-201ENSMUST00000202134 223 ntBASIC4.49□□□□□ -1.69
Cpsf6Q6NVF9 AC126267.1-201ENSMUST00000214282 284 ntBASIC4.49□□□□□ -1.69
Cpsf6Q6NVF9 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Cpsf6Q6NVF9 AC154603.1-201ENSMUST00000224355 313 ntBASIC4.49□□□□□ -1.69
Cpsf6Q6NVF9 AC159252.1-201ENSMUST00000224450 553 ntBASIC4.49□□□□□ -1.69
Cpsf6Q6NVF9 AC166574.3-201ENSMUST00000226725 367 ntBASIC4.49□□□□□ -1.69
Cpsf6Q6NVF9 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Cpsf6Q6NVF9 Snora52-201ENSMUST00000082732 137 ntBASIC4.49□□□□□ -1.69
Cpsf6Q6NVF9 Snord14e-201ENSMUST00000082857 90 ntBASIC4.49□□□□□ -1.69
Cpsf6Q6NVF9 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
Cpsf6Q6NVF9 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Cpsf6Q6NVF9 AC144772.3-201ENSMUST00000228829 3126 ntBASIC4.49□□□□□ -1.69
Cpsf6Q6NVF9 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
Cpsf6Q6NVF9 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Cpsf6Q6NVF9 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Cpsf6Q6NVF9 Gm37916-201ENSMUST00000192153 2435 ntBASIC4.48□□□□□ -1.69
Cpsf6Q6NVF9 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Cpsf6Q6NVF9 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Cpsf6Q6NVF9 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Cpsf6Q6NVF9 Gm37205-201ENSMUST00000194820 2736 ntBASIC4.48□□□□□ -1.69
Cpsf6Q6NVF9 Gm37527-201ENSMUST00000192406 3547 ntBASIC4.48□□□□□ -1.69
Cpsf6Q6NVF9 Gm23193-201ENSMUST00000102427 82 ntBASIC4.48□□□□□ -1.69
Cpsf6Q6NVF9 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC4.48□□□□□ -1.69
Cpsf6Q6NVF9 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC4.48□□□□□ -1.69
Cpsf6Q6NVF9 A630023P12Rik-204ENSMUST00000142879 524 ntTSL 3 BASIC4.48□□□□□ -1.69
Cpsf6Q6NVF9 Gm12226-201ENSMUST00000144172 876 ntBASIC4.48□□□□□ -1.69
Cpsf6Q6NVF9 Gm22084-201ENSMUST00000157585 105 ntBASIC4.48□□□□□ -1.69
Cpsf6Q6NVF9 Gm22389-201ENSMUST00000158193 301 ntBASIC4.48□□□□□ -1.69
Cpsf6Q6NVF9 Gm27510-201ENSMUST00000158214 64 ntBASIC4.48□□□□□ -1.69
Cpsf6Q6NVF9 Gm23759-201ENSMUST00000158351 268 ntBASIC4.48□□□□□ -1.69
Cpsf6Q6NVF9 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Cpsf6Q6NVF9 Gm17183-201ENSMUST00000171170 493 ntBASIC4.48□□□□□ -1.69
Cpsf6Q6NVF9 Gm42428-201ENSMUST00000198677 302 ntBASIC4.48□□□□□ -1.69
Cpsf6Q6NVF9 Gm17811-201ENSMUST00000206193 387 ntBASIC4.48□□□□□ -1.69
Cpsf6Q6NVF9 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC4.48□□□□□ -1.69
Cpsf6Q6NVF9 Gm20039-201ENSMUST00000210329 394 ntBASIC4.48□□□□□ -1.69
Cpsf6Q6NVF9 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC4.48□□□□□ -1.69
Cpsf6Q6NVF9 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC4.48□□□□□ -1.69
Cpsf6Q6NVF9 AC154335.2-201ENSMUST00000225916 638 ntBASIC4.48□□□□□ -1.69
Cpsf6Q6NVF9 AC165138.1-201ENSMUST00000226984 270 ntBASIC4.48□□□□□ -1.69
Cpsf6Q6NVF9 Gm4987-201ENSMUST00000078326 408 ntBASIC4.48□□□□□ -1.69
Cpsf6Q6NVF9 Gm22828-201ENSMUST00000083768 107 ntBASIC4.48□□□□□ -1.69
Cpsf6Q6NVF9 Ccl26-201ENSMUST00000094226 282 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Cpsf6Q6NVF9 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Cpsf6Q6NVF9 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC4.48□□□□□ -1.69
Cpsf6Q6NVF9 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC4.48□□□□□ -1.69
Cpsf6Q6NVF9 Gm15304-201ENSMUST00000122150 2640 ntBASIC4.48□□□□□ -1.69
Cpsf6Q6NVF9 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Cpsf6Q6NVF9 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Cpsf6Q6NVF9 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
Cpsf6Q6NVF9 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
Cpsf6Q6NVF9 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 109.9 ms