Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Gm29574-201ENSMUST00000186226 696 ntBASIC3.79□□□□□ -1.8
Trim27Q62158 Gm28828-201ENSMUST00000186601 696 ntBASIC3.79□□□□□ -1.8
Trim27Q62158 Gm28057-201ENSMUST00000186603 615 ntBASIC3.79□□□□□ -1.8
Trim27Q62158 Gm29307-201ENSMUST00000187367 696 ntBASIC3.79□□□□□ -1.8
Trim27Q62158 Gm28534-201ENSMUST00000187744 676 ntBASIC3.79□□□□□ -1.8
Trim27Q62158 Gm28397-201ENSMUST00000187970 699 ntBASIC3.79□□□□□ -1.8
Trim27Q62158 Gm28896-201ENSMUST00000188609 696 ntBASIC3.79□□□□□ -1.8
Trim27Q62158 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Trim27Q62158 Gm29339-201ENSMUST00000189613 696 ntBASIC3.79□□□□□ -1.8
Trim27Q62158 Gm28159-201ENSMUST00000190296 696 ntBASIC3.79□□□□□ -1.8
Trim27Q62158 Gm29366-201ENSMUST00000190481 699 ntBASIC3.79□□□□□ -1.8
Trim27Q62158 Gm29407-201ENSMUST00000191468 696 ntBASIC3.79□□□□□ -1.8
Trim27Q62158 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC3.79□□□□□ -1.8
Trim27Q62158 Gm37433-201ENSMUST00000192695 678 ntBASIC3.79□□□□□ -1.8
Trim27Q62158 Gm37979-201ENSMUST00000193065 712 ntBASIC3.79□□□□□ -1.8
Trim27Q62158 Gm37441-201ENSMUST00000194430 678 ntBASIC3.79□□□□□ -1.8
Trim27Q62158 Gm38107-201ENSMUST00000194873 696 ntBASIC3.79□□□□□ -1.8
Trim27Q62158 Gm45023-201ENSMUST00000207951 379 ntBASIC3.79□□□□□ -1.8
Trim27Q62158 Gm5358-201ENSMUST00000212814 353 ntBASIC3.79□□□□□ -1.8
Trim27Q62158 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC3.79□□□□□ -1.8
Trim27Q62158 AC124489.2-201ENSMUST00000223930 589 ntBASIC3.79□□□□□ -1.8
Trim27Q62158 AC129202.3-201ENSMUST00000224413 733 ntBASIC3.79□□□□□ -1.8
Trim27Q62158 Gm5265-201ENSMUST00000076828 342 ntBASIC3.79□□□□□ -1.8
Trim27Q62158 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Trim27Q62158 Olfr1450-201ENSMUST00000082006 978 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Trim27Q62158 Clec9a-202ENSMUST00000088075 1020 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
Trim27Q62158 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.79□□□□□ -1.8
Trim27Q62158 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
Trim27Q62158 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Trim27Q62158 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
Trim27Q62158 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Trim27Q62158 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Trim27Q62158 Vmn1r46-203ENSMUST00000226715 10861 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Trim27Q62158 Vmn1r46-205ENSMUST00000228349 10861 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Trim27Q62158 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
Trim27Q62158 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Trim27Q62158 Gm13717-201ENSMUST00000119868 365 ntBASIC3.78□□□□□ -1.8
Trim27Q62158 n-R5s192-201ENSMUST00000122577 119 ntBASIC3.78□□□□□ -1.8
Trim27Q62158 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC3.78□□□□□ -1.8
Trim27Q62158 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC3.78□□□□□ -1.8
Trim27Q62158 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Trim27Q62158 Gm44157-201ENSMUST00000204720 410 ntBASIC3.78□□□□□ -1.8
Trim27Q62158 Gm45226-201ENSMUST00000206602 288 ntBASIC3.78□□□□□ -1.8
Trim27Q62158 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC3.78□□□□□ -1.8
Trim27Q62158 Gm45636-201ENSMUST00000210497 1064 ntBASIC3.78□□□□□ -1.8
Trim27Q62158 Gnrh1-202ENSMUST00000223929 428 ntBASIC3.78□□□□□ -1.8
Trim27Q62158 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Trim27Q62158 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Trim27Q62158 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
Trim27Q62158 Gm12128-201ENSMUST00000131013 2914 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
Trim27Q62158 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Trim27Q62158 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Trim27Q62158 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Trim27Q62158 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Trim27Q62158 Gm22115-201ENSMUST00000103976 133 ntBASIC3.77□□□□□ -1.81
Trim27Q62158 Gm23923-201ENSMUST00000104108 133 ntBASIC3.77□□□□□ -1.81
Trim27Q62158 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC3.77□□□□□ -1.81
Trim27Q62158 Gm12102-201ENSMUST00000118251 604 ntBASIC3.77□□□□□ -1.81
Trim27Q62158 Gm11219-201ENSMUST00000118565 358 ntBASIC3.77□□□□□ -1.81
Trim27Q62158 Gm11430-201ENSMUST00000121317 217 ntBASIC3.77□□□□□ -1.81
Trim27Q62158 Gm22956-201ENSMUST00000122520 80 ntBASIC3.77□□□□□ -1.81
Trim27Q62158 Gm24836-201ENSMUST00000122609 108 ntBASIC3.77□□□□□ -1.81
Trim27Q62158 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC3.77□□□□□ -1.81
Trim27Q62158 Gm22187-201ENSMUST00000157819 129 ntBASIC3.77□□□□□ -1.81
Trim27Q62158 Gm22516-201ENSMUST00000158266 124 ntBASIC3.77□□□□□ -1.81
Trim27Q62158 Gm22521-201ENSMUST00000158272 134 ntBASIC3.77□□□□□ -1.81
Trim27Q62158 Gm26005-201ENSMUST00000158802 134 ntBASIC3.77□□□□□ -1.81
Trim27Q62158 Gm6264-202ENSMUST00000162896 1217 ntBASIC3.77□□□□□ -1.81
Trim27Q62158 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC3.77□□□□□ -1.81
Trim27Q62158 Rps24-202ENSMUST00000169826 519 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Trim27Q62158 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC3.77□□□□□ -1.81
Trim27Q62158 Gm26928-201ENSMUST00000182674 572 ntBASIC3.77□□□□□ -1.81
Trim27Q62158 Gm28666-201ENSMUST00000186649 274 ntBASIC3.77□□□□□ -1.81
Trim27Q62158 Gm32340-201ENSMUST00000192883 259 ntBASIC3.77□□□□□ -1.81
Trim27Q62158 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC3.77□□□□□ -1.81
Trim27Q62158 Gm44212-201ENSMUST00000205016 897 ntBASIC3.77□□□□□ -1.81
Trim27Q62158 Gm44266-201ENSMUST00000205235 500 ntBASIC3.77□□□□□ -1.81
Trim27Q62158 AC192616.3-201ENSMUST00000220797 1124 ntBASIC3.77□□□□□ -1.81
Trim27Q62158 CT030135.1-201ENSMUST00000223760 570 ntBASIC3.77□□□□□ -1.81
Trim27Q62158 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.77□□□□□ -1.81
Trim27Q62158 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Trim27Q62158 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Trim27Q62158 Gm25008-201ENSMUST00000083809 81 ntBASIC3.77□□□□□ -1.81
Trim27Q62158 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Trim27Q62158 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.77□□□□□ -1.81
Trim27Q62158 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Trim27Q62158 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
Trim27Q62158 Gm26002-201ENSMUST00000101915 107 ntBASIC3.76□□□□□ -1.81
Trim27Q62158 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
Trim27Q62158 Gm24982-201ENSMUST00000104456 132 ntBASIC3.76□□□□□ -1.81
Trim27Q62158 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC3.76□□□□□ -1.81
Trim27Q62158 Gm15312-201ENSMUST00000118827 271 ntBASIC3.76□□□□□ -1.81
Trim27Q62158 Gm14128-201ENSMUST00000119514 1011 ntBASIC3.76□□□□□ -1.81
Trim27Q62158 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC3.76□□□□□ -1.81
Trim27Q62158 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC3.76□□□□□ -1.81
Trim27Q62158 Gm15309-201ENSMUST00000121644 240 ntBASIC3.76□□□□□ -1.81
Trim27Q62158 Gm14389-201ENSMUST00000140453 241 ntBASIC3.76□□□□□ -1.81
Trim27Q62158 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC3.76□□□□□ -1.81
Trim27Q62158 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC3.76□□□□□ -1.81
Trim27Q62158 Gm5277-201ENSMUST00000164923 556 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms