Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Gm43238-201ENSMUST00000196463 359 ntBASIC3.91□□□□□ -1.78
CtcfQ61164 Mir129b-201ENSMUST00000197461 65 ntBASIC3.91□□□□□ -1.78
CtcfQ61164 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CtcfQ61164 Gm45400-201ENSMUST00000211603 653 ntBASIC3.91□□□□□ -1.78
CtcfQ61164 Gm45848-201ENSMUST00000212932 1871 ntTSL 5 BASIC3.91□□□□□ -1.78
CtcfQ61164 Gm18113-201ENSMUST00000220630 303 ntBASIC3.91□□□□□ -1.78
CtcfQ61164 AC127270.2-201ENSMUST00000221337 247 ntBASIC3.91□□□□□ -1.78
CtcfQ61164 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.91□□□□□ -1.78
CtcfQ61164 Gm42909-201ENSMUST00000196982 3619 ntBASIC3.91□□□□□ -1.78
CtcfQ61164 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.91□□□□□ -1.78
CtcfQ61164 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
CtcfQ61164 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CtcfQ61164 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.9□□□□□ -1.78
CtcfQ61164 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CtcfQ61164 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
CtcfQ61164 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC3.9□□□□□ -1.78
CtcfQ61164 Gm24096-201ENSMUST00000103905 110 ntBASIC3.9□□□□□ -1.79
CtcfQ61164 Gm24281-201ENSMUST00000104234 136 ntBASIC3.9□□□□□ -1.79
CtcfQ61164 Defa-ps5-201ENSMUST00000121541 279 ntBASIC3.9□□□□□ -1.79
CtcfQ61164 Gm14530-201ENSMUST00000122391 333 ntBASIC3.9□□□□□ -1.79
CtcfQ61164 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC3.9□□□□□ -1.79
CtcfQ61164 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC3.9□□□□□ -1.79
CtcfQ61164 Gm23112-201ENSMUST00000158606 125 ntBASIC3.9□□□□□ -1.79
CtcfQ61164 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC3.9□□□□□ -1.79
CtcfQ61164 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC3.9□□□□□ -1.79
CtcfQ61164 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CtcfQ61164 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC3.9□□□□□ -1.79
CtcfQ61164 Gm28628-201ENSMUST00000187006 264 ntBASIC3.9□□□□□ -1.79
CtcfQ61164 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC3.9□□□□□ -1.79
CtcfQ61164 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC3.9□□□□□ -1.79
CtcfQ61164 Gm37495-201ENSMUST00000194590 264 ntBASIC3.9□□□□□ -1.79
CtcfQ61164 Gm36953-201ENSMUST00000195295 268 ntBASIC3.9□□□□□ -1.79
CtcfQ61164 Gm43035-201ENSMUST00000197626 517 ntBASIC3.9□□□□□ -1.79
CtcfQ61164 Gm43505-201ENSMUST00000200579 139 ntBASIC3.9□□□□□ -1.79
CtcfQ61164 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC3.9□□□□□ -1.79
CtcfQ61164 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC3.9□□□□□ -1.79
CtcfQ61164 Gm18903-201ENSMUST00000215343 480 ntBASIC3.9□□□□□ -1.79
CtcfQ61164 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC3.9□□□□□ -1.79
CtcfQ61164 Gm4921-201ENSMUST00000219804 992 ntBASIC3.9□□□□□ -1.79
CtcfQ61164 AC131720.2-201ENSMUST00000220420 431 ntBASIC3.9□□□□□ -1.79
CtcfQ61164 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CtcfQ61164 AC124549.2-201ENSMUST00000224243 222 ntBASIC3.9□□□□□ -1.79
CtcfQ61164 AC129202.3-201ENSMUST00000224413 733 ntBASIC3.9□□□□□ -1.79
CtcfQ61164 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CtcfQ61164 Gm23614-201ENSMUST00000082598 107 ntBASIC3.9□□□□□ -1.79
CtcfQ61164 n-R5s79-201ENSMUST00000083071 120 ntBASIC3.9□□□□□ -1.79
CtcfQ61164 Snora31-201ENSMUST00000083213 130 ntBASIC3.9□□□□□ -1.79
CtcfQ61164 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
CtcfQ61164 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
CtcfQ61164 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
CtcfQ61164 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.89□□□□□ -1.79
CtcfQ61164 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CtcfQ61164 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CtcfQ61164 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
CtcfQ61164 Gm44434-201ENSMUST00000203918 3745 ntBASIC3.89□□□□□ -1.79
CtcfQ61164 Mir599-201ENSMUST00000102378 88 ntBASIC3.89□□□□□ -1.79
CtcfQ61164 Gm25169-201ENSMUST00000104190 129 ntBASIC3.89□□□□□ -1.79
CtcfQ61164 Gm14793-201ENSMUST00000118739 311 ntBASIC3.89□□□□□ -1.79
CtcfQ61164 Gm9043-201ENSMUST00000119677 314 ntBASIC3.89□□□□□ -1.79
CtcfQ61164 Gm23098-201ENSMUST00000157552 299 ntBASIC3.89□□□□□ -1.79
CtcfQ61164 Gm15946-201ENSMUST00000160654 423 ntBASIC3.89□□□□□ -1.79
CtcfQ61164 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC3.89□□□□□ -1.79
CtcfQ61164 Gm4761-201ENSMUST00000178086 582 ntBASIC3.89□□□□□ -1.79
CtcfQ61164 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC3.89□□□□□ -1.79
CtcfQ61164 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC3.89□□□□□ -1.79
CtcfQ61164 Gm18291-201ENSMUST00000190791 301 ntBASIC3.89□□□□□ -1.79
CtcfQ61164 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
CtcfQ61164 Gm37399-201ENSMUST00000195224 416 ntBASIC3.89□□□□□ -1.79
CtcfQ61164 Gm37290-201ENSMUST00000195775 339 ntBASIC3.89□□□□□ -1.79
CtcfQ61164 Gm5983-201ENSMUST00000197739 770 ntBASIC3.89□□□□□ -1.79
CtcfQ61164 Gm45439-201ENSMUST00000211723 359 ntBASIC3.89□□□□□ -1.79
CtcfQ61164 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
CtcfQ61164 AC117588.3-201ENSMUST00000228517 325 ntBASIC3.89□□□□□ -1.79
CtcfQ61164 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CtcfQ61164 Gm22304-201ENSMUST00000082688 129 ntBASIC3.89□□□□□ -1.79
CtcfQ61164 Gm23378-201ENSMUST00000082942 107 ntBASIC3.89□□□□□ -1.79
CtcfQ61164 Gm25126-201ENSMUST00000083343 102 ntBASIC3.89□□□□□ -1.79
CtcfQ61164 Gm25578-201ENSMUST00000083406 104 ntBASIC3.89□□□□□ -1.79
CtcfQ61164 Gm24765-201ENSMUST00000083691 103 ntBASIC3.89□□□□□ -1.79
CtcfQ61164 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CtcfQ61164 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CtcfQ61164 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CtcfQ61164 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
CtcfQ61164 Gm3095-201ENSMUST00000164696 1568 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
CtcfQ61164 AC154511.1-201ENSMUST00000222578 1587 ntBASIC3.89□□□□□ -1.79
CtcfQ61164 Gm37999-201ENSMUST00000195178 1809 ntBASIC3.88□□□□□ -1.79
CtcfQ61164 Defa-ps9-201ENSMUST00000118264 276 ntBASIC3.88□□□□□ -1.79
CtcfQ61164 Gm15113-201ENSMUST00000119280 836 ntBASIC3.88□□□□□ -1.79
CtcfQ61164 Gm22034-201ENSMUST00000157283 134 ntBASIC3.88□□□□□ -1.79
CtcfQ61164 Gm23123-201ENSMUST00000157648 144 ntBASIC3.88□□□□□ -1.79
CtcfQ61164 Gm24727-201ENSMUST00000158231 144 ntBASIC3.88□□□□□ -1.79
CtcfQ61164 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC3.88□□□□□ -1.79
CtcfQ61164 Snord92-201ENSMUST00000175548 85 ntBASIC3.88□□□□□ -1.79
CtcfQ61164 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC3.88□□□□□ -1.79
CtcfQ61164 Gm25874-201ENSMUST00000178030 79 ntBASIC3.88□□□□□ -1.79
CtcfQ61164 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC3.88□□□□□ -1.79
CtcfQ61164 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CtcfQ61164 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
CtcfQ61164 Gm23816-201ENSMUST00000179617 132 ntBASIC3.88□□□□□ -1.79
CtcfQ61164 Gm21729-201ENSMUST00000180058 664 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 81.8 ms