Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Usf1Q61069 Gm38090-201ENSMUST00000195733 1942 ntBASIC2.8□□□□□ -1.96
Usf1Q61069 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Usf1Q61069 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Usf1Q61069 Gm5958-201ENSMUST00000147698 297 ntBASIC2.8□□□□□ -1.96
Usf1Q61069 Gm22521-201ENSMUST00000158272 134 ntBASIC2.8□□□□□ -1.96
Usf1Q61069 Gm16569-201ENSMUST00000160526 314 ntBASIC2.8□□□□□ -1.96
Usf1Q61069 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Usf1Q61069 Gm26061-201ENSMUST00000175584 108 ntBASIC2.8□□□□□ -1.96
Usf1Q61069 Gm23963-201ENSMUST00000179603 77 ntBASIC2.8□□□□□ -1.96
Usf1Q61069 Trbv12-3-201ENSMUST00000192675 372 ntBASIC2.8□□□□□ -1.96
Usf1Q61069 Gm43541-201ENSMUST00000197208 581 ntBASIC2.8□□□□□ -1.96
Usf1Q61069 Gm42578-201ENSMUST00000199960 194 ntBASIC2.8□□□□□ -1.96
Usf1Q61069 Gm44266-201ENSMUST00000205235 500 ntBASIC2.8□□□□□ -1.96
Usf1Q61069 AC159476.2-201ENSMUST00000216221 418 ntBASIC2.8□□□□□ -1.96
Usf1Q61069 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC2.8□□□□□ -1.96
Usf1Q61069 AC155167.3-201ENSMUST00000226349 217 ntBASIC2.8□□□□□ -1.96
Usf1Q61069 AC125523.1-201ENSMUST00000228018 934 ntBASIC2.8□□□□□ -1.96
Usf1Q61069 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
Usf1Q61069 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Usf1Q61069 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Usf1Q61069 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Usf1Q61069 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC2.79□□□□□ -1.96
Usf1Q61069 Mir291a-201ENSMUST00000104815 82 ntBASIC2.79□□□□□ -1.96
Usf1Q61069 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC2.79□□□□□ -1.96
Usf1Q61069 Gm12492-201ENSMUST00000117665 564 ntBASIC2.79□□□□□ -1.96
Usf1Q61069 Gm14253-201ENSMUST00000122112 639 ntBASIC2.79□□□□□ -1.96
Usf1Q61069 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Usf1Q61069 Gm24681-201ENSMUST00000158760 107 ntBASIC2.79□□□□□ -1.96
Usf1Q61069 Nron-204ENSMUST00000158971 370 ntBASIC2.79□□□□□ -1.96
Usf1Q61069 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Usf1Q61069 Gm27861-201ENSMUST00000183920 214 ntBASIC2.79□□□□□ -1.96
Usf1Q61069 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Usf1Q61069 Gm37578-201ENSMUST00000192256 1177 ntBASIC2.79□□□□□ -1.96
Usf1Q61069 Gm6321-201ENSMUST00000194460 1090 ntBASIC2.79□□□□□ -1.96
Usf1Q61069 Igkv15-101-1-201ENSMUST00000196661 258 ntBASIC2.79□□□□□ -1.96
Usf1Q61069 Gm42465-201ENSMUST00000197036 492 ntBASIC2.79□□□□□ -1.96
Usf1Q61069 Gm42958-201ENSMUST00000197595 318 ntBASIC2.79□□□□□ -1.96
Usf1Q61069 Gm43521-201ENSMUST00000197838 255 ntBASIC2.79□□□□□ -1.96
Usf1Q61069 Gm43107-201ENSMUST00000198729 255 ntBASIC2.79□□□□□ -1.96
Usf1Q61069 Gm43992-201ENSMUST00000204358 197 ntBASIC2.79□□□□□ -1.96
Usf1Q61069 Gm44554-201ENSMUST00000208738 147 ntBASIC2.79□□□□□ -1.96
Usf1Q61069 Gm45312-201ENSMUST00000210566 311 ntBASIC2.79□□□□□ -1.96
Usf1Q61069 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.79□□□□□ -1.96
Usf1Q61069 CT025525.1-201ENSMUST00000226325 1054 ntBASIC2.79□□□□□ -1.96
Usf1Q61069 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Usf1Q61069 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Usf1Q61069 Gm10025-201ENSMUST00000079568 372 ntBASIC2.79□□□□□ -1.96
Usf1Q61069 Smcp-201ENSMUST00000098888 861 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Usf1Q61069 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC2.79□□□□□ -1.96
Usf1Q61069 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC2.79□□□□□ -1.96
Usf1Q61069 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
Usf1Q61069 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
Usf1Q61069 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
Usf1Q61069 Gm12723-201ENSMUST00000120700 451 ntBASIC2.78□□□□□ -1.96
Usf1Q61069 Gm14821-201ENSMUST00000121975 435 ntBASIC2.78□□□□□ -1.96
Usf1Q61069 Gm14333-201ENSMUST00000130484 264 ntBASIC2.78□□□□□ -1.96
Usf1Q61069 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Usf1Q61069 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC2.78□□□□□ -1.96
Usf1Q61069 Gm22141-201ENSMUST00000157403 277 ntBASIC2.78□□□□□ -1.96
Usf1Q61069 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC2.78□□□□□ -1.96
Usf1Q61069 Gm27648-201ENSMUST00000184315 107 ntBASIC2.78□□□□□ -1.96
Usf1Q61069 Mir8096-201ENSMUST00000184526 127 ntBASIC2.78□□□□□ -1.96
Usf1Q61069 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC2.78□□□□□ -1.96
Usf1Q61069 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
Usf1Q61069 Gm29288-201ENSMUST00000191582 901 ntBASIC2.78□□□□□ -1.96
Usf1Q61069 Gm33571-201ENSMUST00000193271 657 ntBASIC2.78□□□□□ -1.96
Usf1Q61069 Gm38216-201ENSMUST00000194872 1214 ntBASIC2.78□□□□□ -1.96
Usf1Q61069 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.78□□□□□ -1.96
Usf1Q61069 Gm5485-201ENSMUST00000212197 628 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Usf1Q61069 AC168266.1-201ENSMUST00000216024 226 ntBASIC2.78□□□□□ -1.96
Usf1Q61069 AC134596.2-201ENSMUST00000222158 171 ntBASIC2.78□□□□□ -1.96
Usf1Q61069 AC164116.2-201ENSMUST00000225398 1038 ntBASIC2.78□□□□□ -1.96
Usf1Q61069 CT572983.1-201ENSMUST00000226895 514 ntBASIC2.78□□□□□ -1.96
Usf1Q61069 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Usf1Q61069 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Usf1Q61069 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
Usf1Q61069 Gm43256-201ENSMUST00000199995 3091 ntBASIC2.78□□□□□ -1.96
Usf1Q61069 Gm43230-201ENSMUST00000200980 2129 ntBASIC2.78□□□□□ -1.96
Usf1Q61069 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
Usf1Q61069 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.97
Usf1Q61069 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.97
Usf1Q61069 Zfp930-201ENSMUST00000110216 1323 ntTSL 5 BASIC2.77□□□□□ -1.97
Usf1Q61069 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Usf1Q61069 Gm7123-201ENSMUST00000117647 213 ntBASIC2.77□□□□□ -1.97
Usf1Q61069 Gm15854-201ENSMUST00000118879 808 ntBASIC2.77□□□□□ -1.97
Usf1Q61069 Gm12803-201ENSMUST00000118907 821 ntBASIC2.77□□□□□ -1.97
Usf1Q61069 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC2.77□□□□□ -1.97
Usf1Q61069 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Usf1Q61069 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Usf1Q61069 Gm24968-201ENSMUST00000179817 107 ntBASIC2.77□□□□□ -1.97
Usf1Q61069 Gm27379-201ENSMUST00000183730 123 ntBASIC2.77□□□□□ -1.97
Usf1Q61069 Gm28146-201ENSMUST00000185517 701 ntBASIC2.77□□□□□ -1.97
Usf1Q61069 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC2.77□□□□□ -1.97
Usf1Q61069 Gm28981-201ENSMUST00000190863 1288 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Usf1Q61069 Gm19498-201ENSMUST00000191128 331 ntBASIC2.77□□□□□ -1.97
Usf1Q61069 Gm8242-202ENSMUST00000193056 475 ntBASIC2.77□□□□□ -1.97
Usf1Q61069 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC2.77□□□□□ -1.97
Usf1Q61069 Gm44526-201ENSMUST00000204664 121 ntBASIC2.77□□□□□ -1.97
Usf1Q61069 Gm44720-201ENSMUST00000206076 260 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms