Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 AC126440.1-201ENSMUST00000227098 349 ntBASIC1.47□□□□□ -2.17
Trav3-1Q5R1I8 AC150560.3-201ENSMUST00000227442 455 ntBASIC1.47□□□□□ -2.17
Trav3-1Q5R1I8 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
Trav3-1Q5R1I8 Gm23942-201ENSMUST00000101956 107 ntBASIC1.46□□□□□ -2.18
Trav3-1Q5R1I8 Gm8080-201ENSMUST00000122046 1155 ntBASIC1.46□□□□□ -2.18
Trav3-1Q5R1I8 Gm24857-201ENSMUST00000158061 310 ntBASIC1.46□□□□□ -2.18
Trav3-1Q5R1I8 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Trav3-1Q5R1I8 Gm20701-201ENSMUST00000176082 347 ntBASIC1.46□□□□□ -2.18
Trav3-1Q5R1I8 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC1.46□□□□□ -2.18
Trav3-1Q5R1I8 Gm29184-201ENSMUST00000190038 334 ntBASIC1.46□□□□□ -2.18
Trav3-1Q5R1I8 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC1.46□□□□□ -2.18
Trav3-1Q5R1I8 Trav12-4-201ENSMUST00000200663 271 ntBASIC1.46□□□□□ -2.18
Trav3-1Q5R1I8 Gm44472-201ENSMUST00000204922 943 ntBASIC1.46□□□□□ -2.18
Trav3-1Q5R1I8 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC1.46□□□□□ -2.18
Trav3-1Q5R1I8 Gm18850-201ENSMUST00000211578 388 ntBASIC1.46□□□□□ -2.18
Trav3-1Q5R1I8 Gm19219-201ENSMUST00000215863 724 ntBASIC1.46□□□□□ -2.18
Trav3-1Q5R1I8 AC163289.1-201ENSMUST00000215919 262 ntBASIC1.46□□□□□ -2.18
Trav3-1Q5R1I8 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC1.46□□□□□ -2.18
Trav3-1Q5R1I8 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC1.46□□□□□ -2.18
Trav3-1Q5R1I8 Gm7214-201ENSMUST00000222428 272 ntBASIC1.46□□□□□ -2.18
Trav3-1Q5R1I8 AC154305.1-201ENSMUST00000224443 450 ntBASIC1.46□□□□□ -2.18
Trav3-1Q5R1I8 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC1.46□□□□□ -2.18
Trav3-1Q5R1I8 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
Trav3-1Q5R1I8 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Trav3-1Q5R1I8 Gm26165-201ENSMUST00000083791 138 ntBASIC1.46□□□□□ -2.18
Trav3-1Q5R1I8 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Trav3-1Q5R1I8 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Trav3-1Q5R1I8 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Trav3-1Q5R1I8 Igkv5-48-201ENSMUST00000103364 360 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Trav3-1Q5R1I8 Mir873a-201ENSMUST00000104863 77 ntBASIC1.45□□□□□ -2.18
Trav3-1Q5R1I8 Gm13046-201ENSMUST00000117391 501 ntBASIC1.45□□□□□ -2.18
Trav3-1Q5R1I8 Gm14103-201ENSMUST00000119075 366 ntBASIC1.45□□□□□ -2.18
Trav3-1Q5R1I8 Gm11429-201ENSMUST00000119089 144 ntBASIC1.45□□□□□ -2.18
Trav3-1Q5R1I8 Gm13862-201ENSMUST00000121220 197 ntBASIC1.45□□□□□ -2.18
Trav3-1Q5R1I8 Defa-ps5-201ENSMUST00000121541 279 ntBASIC1.45□□□□□ -2.18
Trav3-1Q5R1I8 Gm12872-201ENSMUST00000121835 320 ntBASIC1.45□□□□□ -2.18
Trav3-1Q5R1I8 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC1.45□□□□□ -2.18
Trav3-1Q5R1I8 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.45□□□□□ -2.18
Trav3-1Q5R1I8 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Trav3-1Q5R1I8 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC1.45□□□□□ -2.18
Trav3-1Q5R1I8 Gm18520-201ENSMUST00000174783 658 ntBASIC1.45□□□□□ -2.18
Trav3-1Q5R1I8 Gm18448-201ENSMUST00000186286 599 ntBASIC1.45□□□□□ -2.18
Trav3-1Q5R1I8 Gm17966-201ENSMUST00000193453 594 ntBASIC1.45□□□□□ -2.18
Trav3-1Q5R1I8 Gm43043-201ENSMUST00000196579 412 ntBASIC1.45□□□□□ -2.18
Trav3-1Q5R1I8 Pip-202ENSMUST00000203244 736 ntTSL 3 BASIC1.45□□□□□ -2.18
Trav3-1Q5R1I8 Gm44256-201ENSMUST00000203304 335 ntBASIC1.45□□□□□ -2.18
Trav3-1Q5R1I8 Gm45023-201ENSMUST00000207951 379 ntBASIC1.45□□□□□ -2.18
Trav3-1Q5R1I8 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC1.45□□□□□ -2.18
Trav3-1Q5R1I8 Gm45652-201ENSMUST00000210926 3831 ntBASIC1.45□□□□□ -2.18
Trav3-1Q5R1I8 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC1.45□□□□□ -2.18
Trav3-1Q5R1I8 AC153899.1-201ENSMUST00000214092 1117 ntBASIC1.45□□□□□ -2.18
Trav3-1Q5R1I8 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC1.45□□□□□ -2.18
Trav3-1Q5R1I8 CT030187.1-201ENSMUST00000220605 252 ntBASIC1.45□□□□□ -2.18
Trav3-1Q5R1I8 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Trav3-1Q5R1I8 Gm25124-201ENSMUST00000083345 164 ntBASIC1.45□□□□□ -2.18
Trav3-1Q5R1I8 Gm24446-201ENSMUST00000083982 156 ntBASIC1.45□□□□□ -2.18
Trav3-1Q5R1I8 AC164297.6-201ENSMUST00000224643 1568 ntBASIC1.45□□□□□ -2.18
Trav3-1Q5R1I8 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC1.45□□□□□ -2.18
Trav3-1Q5R1I8 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Trav3-1Q5R1I8 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Trav3-1Q5R1I8 Mir667-201ENSMUST00000102441 92 ntBASIC1.44□□□□□ -2.18
Trav3-1Q5R1I8 Gm14073-201ENSMUST00000117344 381 ntBASIC1.44□□□□□ -2.18
Trav3-1Q5R1I8 Gm15382-201ENSMUST00000118011 537 ntBASIC1.44□□□□□ -2.18
Trav3-1Q5R1I8 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Trav3-1Q5R1I8 Gm25295-201ENSMUST00000122794 306 ntBASIC1.44□□□□□ -2.18
Trav3-1Q5R1I8 Gm24291-201ENSMUST00000157633 162 ntBASIC1.44□□□□□ -2.18
Trav3-1Q5R1I8 Gm22386-201ENSMUST00000158192 129 ntBASIC1.44□□□□□ -2.18
Trav3-1Q5R1I8 Gm24771-201ENSMUST00000158508 137 ntBASIC1.44□□□□□ -2.18
Trav3-1Q5R1I8 Gm16026-202ENSMUST00000159695 772 ntBASIC1.44□□□□□ -2.18
Trav3-1Q5R1I8 Gm9027-201ENSMUST00000165914 661 ntBASIC1.44□□□□□ -2.18
Trav3-1Q5R1I8 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC1.44□□□□□ -2.18
Trav3-1Q5R1I8 Gm24304-201ENSMUST00000177635 107 ntBASIC1.44□□□□□ -2.18
Trav3-1Q5R1I8 Gm21885-201ENSMUST00000178891 327 ntBASIC1.44□□□□□ -2.18
Trav3-1Q5R1I8 Gm19224-201ENSMUST00000190477 793 ntBASIC1.44□□□□□ -2.18
Trav3-1Q5R1I8 Gm3933-201ENSMUST00000195391 439 ntBASIC1.44□□□□□ -2.18
Trav3-1Q5R1I8 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC1.44□□□□□ -2.18
Trav3-1Q5R1I8 Igkv13-64-201ENSMUST00000198143 343 ntBASIC1.44□□□□□ -2.18
Trav3-1Q5R1I8 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC1.44□□□□□ -2.18
Trav3-1Q5R1I8 Olfr850-202ENSMUST00000211832 947 ntAPPRIS ALT2 BASIC1.44□□□□□ -2.18
Trav3-1Q5R1I8 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
Trav3-1Q5R1I8 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Trav3-1Q5R1I8 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Trav3-1Q5R1I8 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Trav3-1Q5R1I8 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Trav3-1Q5R1I8 Snord14d-201ENSMUST00000083424 86 ntBASIC1.44□□□□□ -2.18
Trav3-1Q5R1I8 Gm10161-201ENSMUST00000091506 204 ntBASIC1.44□□□□□ -2.18
Trav3-1Q5R1I8 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC1.44□□□□□ -2.18
Trav3-1Q5R1I8 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC1.44□□□□□ -2.18
Trav3-1Q5R1I8 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC1.43□□□□□ -2.18
Trav3-1Q5R1I8 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Trav3-1Q5R1I8 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Trav3-1Q5R1I8 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Trav3-1Q5R1I8 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Trav3-1Q5R1I8 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Trav3-1Q5R1I8 Olfr1288-202ENSMUST00000214816 1326 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Trav3-1Q5R1I8 Gm25500-201ENSMUST00000104426 123 ntBASIC1.43□□□□□ -2.18
Trav3-1Q5R1I8 Gm11221-201ENSMUST00000117230 597 ntBASIC1.43□□□□□ -2.18
Trav3-1Q5R1I8 Gm12793-201ENSMUST00000119268 292 ntBASIC1.43□□□□□ -2.18
Trav3-1Q5R1I8 Gm11943-201ENSMUST00000119473 327 ntBASIC1.43□□□□□ -2.18
Trav3-1Q5R1I8 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC1.43□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms