Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Gm43239-201ENSMUST00000200131 201 ntBASIC2.94□□□□□ -1.94
Usp28Q5I043 Gm45678-201ENSMUST00000210509 295 ntBASIC2.94□□□□□ -1.94
Usp28Q5I043 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC2.94□□□□□ -1.94
Usp28Q5I043 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC2.94□□□□□ -1.94
Usp28Q5I043 Gm7422-201ENSMUST00000220115 640 ntBASIC2.94□□□□□ -1.94
Usp28Q5I043 AC125223.1-203ENSMUST00000225304 498 ntBASIC2.94□□□□□ -1.94
Usp28Q5I043 CT025157.1-201ENSMUST00000226241 292 ntBASIC2.94□□□□□ -1.94
Usp28Q5I043 AC157772.2-201ENSMUST00000228202 259 ntBASIC2.94□□□□□ -1.94
Usp28Q5I043 Olfr815-201ENSMUST00000071557 951 ntBASIC2.94□□□□□ -1.94
Usp28Q5I043 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Usp28Q5I043 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Usp28Q5I043 Gm10717-203ENSMUST00000099051 639 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
Usp28Q5I043 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
Usp28Q5I043 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Usp28Q5I043 Gm9496-201ENSMUST00000191295 1601 ntBASIC2.93□□□□□ -1.94
Usp28Q5I043 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Usp28Q5I043 Gm44708-201ENSMUST00000205580 2237 ntBASIC2.93□□□□□ -1.94
Usp28Q5I043 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Usp28Q5I043 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Usp28Q5I043 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Usp28Q5I043 Gm7739-201ENSMUST00000221131 1560 ntBASIC2.93□□□□□ -1.94
Usp28Q5I043 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.93□□□□□ -1.94
Usp28Q5I043 Mir19b-1-201ENSMUST00000102301 87 ntBASIC2.93□□□□□ -1.94
Usp28Q5I043 Snora36b-201ENSMUST00000104383 132 ntBASIC2.93□□□□□ -1.94
Usp28Q5I043 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC2.93□□□□□ -1.94
Usp28Q5I043 Gm12787-201ENSMUST00000119234 396 ntBASIC2.93□□□□□ -1.94
Usp28Q5I043 Gm22960-201ENSMUST00000122517 104 ntBASIC2.93□□□□□ -1.94
Usp28Q5I043 Gm23600-201ENSMUST00000157260 71 ntBASIC2.93□□□□□ -1.94
Usp28Q5I043 Gm24905-201ENSMUST00000158129 104 ntBASIC2.93□□□□□ -1.94
Usp28Q5I043 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
Usp28Q5I043 Mir7578-201ENSMUST00000183455 82 ntBASIC2.93□□□□□ -1.94
Usp28Q5I043 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.93□□□□□ -1.94
Usp28Q5I043 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC2.93□□□□□ -1.94
Usp28Q5I043 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC2.93□□□□□ -1.94
Usp28Q5I043 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC2.93□□□□□ -1.94
Usp28Q5I043 Gm8403-201ENSMUST00000189712 1298 ntBASIC2.93□□□□□ -1.94
Usp28Q5I043 Gm36974-201ENSMUST00000194200 1071 ntBASIC2.93□□□□□ -1.94
Usp28Q5I043 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Usp28Q5I043 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC2.93□□□□□ -1.94
Usp28Q5I043 Gm22293-201ENSMUST00000083314 109 ntBASIC2.93□□□□□ -1.94
Usp28Q5I043 Mir465-201ENSMUST00000093563 74 ntBASIC2.93□□□□□ -1.94
Usp28Q5I043 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Usp28Q5I043 Gm7135-202ENSMUST00000191257 1905 ntBASIC2.93□□□□□ -1.94
Usp28Q5I043 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Usp28Q5I043 Gm16436-201ENSMUST00000121510 1607 ntBASIC2.93□□□□□ -1.94
Usp28Q5I043 Gm20679-201ENSMUST00000177285 1402 ntBASIC2.93□□□□□ -1.94
Usp28Q5I043 Olfr1097-201ENSMUST00000111576 4705 ntAPPRIS P1 TSL 3 BASIC2.92□□□□□ -1.94
Usp28Q5I043 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm23128-201ENSMUST00000104257 132 ntBASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm14125-201ENSMUST00000113442 680 ntBASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm14579-201ENSMUST00000117068 283 ntBASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm15087-201ENSMUST00000117465 1172 ntBASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm23599-201ENSMUST00000157261 251 ntBASIC2.92□□□□□ -1.94
Usp28Q5I043 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC2.92□□□□□ -1.94
Usp28Q5I043 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm28637-201ENSMUST00000179424 345 ntBASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm20897-201ENSMUST00000185240 923 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm20883-201ENSMUST00000185245 922 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm21117-202ENSMUST00000185327 925 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm20916-202ENSMUST00000185338 923 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm28897-201ENSMUST00000185340 923 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm20736-202ENSMUST00000185550 923 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm20835-201ENSMUST00000185565 923 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm29564-201ENSMUST00000185575 923 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm29299-201ENSMUST00000185609 923 ntBASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm21317-201ENSMUST00000185636 923 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm21095-202ENSMUST00000185776 923 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm28553-201ENSMUST00000185924 923 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm20908-201ENSMUST00000186004 922 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm20906-201ENSMUST00000186493 923 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm20929-201ENSMUST00000186578 923 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm21518-202ENSMUST00000186938 922 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm20855-202ENSMUST00000186996 924 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm20911-201ENSMUST00000187135 924 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm28102-201ENSMUST00000187146 924 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm28827-201ENSMUST00000187165 923 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm20931-202ENSMUST00000187293 922 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm21760-202ENSMUST00000187433 923 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm29554-201ENSMUST00000187922 821 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm21489-201ENSMUST00000189668 818 ntBASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Usp28Q5I043 Gm29573-201ENSMUST00000190291 919 ntBASIC2.92□□□□□ -1.94
Usp28Q5I043 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 95.6 ms