Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm37692-201ENSMUST00000192633 232 ntBASIC3.24□□□□□ -1.89
Ccdc88bQ4QRL3 Gm43655-201ENSMUST00000197367 222 ntBASIC3.24□□□□□ -1.89
Ccdc88bQ4QRL3 Mir7232-201ENSMUST00000197929 74 ntBASIC3.24□□□□□ -1.89
Ccdc88bQ4QRL3 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
Ccdc88bQ4QRL3 Gm29884-201ENSMUST00000218403 453 ntBASIC3.24□□□□□ -1.89
Ccdc88bQ4QRL3 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC3.24□□□□□ -1.89
Ccdc88bQ4QRL3 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Ccdc88bQ4QRL3 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Ccdc88bQ4QRL3 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Ccdc88bQ4QRL3 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.24□□□□□ -1.89
Ccdc88bQ4QRL3 Gm11876-201ENSMUST00000120002 269 ntBASIC3.23□□□□□ -1.89
Ccdc88bQ4QRL3 Gm23716-201ENSMUST00000157348 144 ntBASIC3.23□□□□□ -1.89
Ccdc88bQ4QRL3 Gm22716-201ENSMUST00000177596 107 ntBASIC3.23□□□□□ -1.89
Ccdc88bQ4QRL3 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Ccdc88bQ4QRL3 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
Ccdc88bQ4QRL3 AC144671.1-201ENSMUST00000215265 99 ntBASIC3.23□□□□□ -1.89
Ccdc88bQ4QRL3 Gm18899-201ENSMUST00000217663 546 ntBASIC3.23□□□□□ -1.89
Ccdc88bQ4QRL3 Gm13743-201ENSMUST00000121486 724 ntBASIC3.22□□□□□ -1.89
Ccdc88bQ4QRL3 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Ccdc88bQ4QRL3 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC3.22□□□□□ -1.89
Ccdc88bQ4QRL3 Gm37455-201ENSMUST00000191993 529 ntBASIC3.22□□□□□ -1.89
Ccdc88bQ4QRL3 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Ccdc88bQ4QRL3 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Ccdc88bQ4QRL3 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Ccdc88bQ4QRL3 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Ccdc88bQ4QRL3 AC158805.1-201ENSMUST00000218197 2631 ntBASIC3.22□□□□□ -1.89
Ccdc88bQ4QRL3 Olfr810-204ENSMUST00000217283 4527 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Ccdc88bQ4QRL3 Gm24096-201ENSMUST00000103905 110 ntBASIC3.22□□□□□ -1.89
Ccdc88bQ4QRL3 Gm14602-201ENSMUST00000118625 340 ntBASIC3.22□□□□□ -1.89
Ccdc88bQ4QRL3 Gm25979-201ENSMUST00000157177 138 ntBASIC3.22□□□□□ -1.89
Ccdc88bQ4QRL3 Gm22083-201ENSMUST00000157586 102 ntBASIC3.22□□□□□ -1.89
Ccdc88bQ4QRL3 Gm2878-201ENSMUST00000170173 486 ntBASIC3.22□□□□□ -1.89
Ccdc88bQ4QRL3 Gm43911-201ENSMUST00000203097 76 ntBASIC3.22□□□□□ -1.89
Ccdc88bQ4QRL3 Gm46993-201ENSMUST00000220708 259 ntBASIC3.22□□□□□ -1.89
Ccdc88bQ4QRL3 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Ccdc88bQ4QRL3 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Ccdc88bQ4QRL3 Gm28176-201ENSMUST00000185322 622 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Ccdc88bQ4QRL3 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Ccdc88bQ4QRL3 Gm29210-201ENSMUST00000186332 622 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Ccdc88bQ4QRL3 Gm28170-201ENSMUST00000186892 622 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Ccdc88bQ4QRL3 Gm28725-201ENSMUST00000187372 622 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Ccdc88bQ4QRL3 Gm29655-201ENSMUST00000187728 622 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Ccdc88bQ4QRL3 Gm28280-201ENSMUST00000188196 622 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Ccdc88bQ4QRL3 Gm28091-201ENSMUST00000188421 622 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Ccdc88bQ4QRL3 Gm28300-202ENSMUST00000189170 622 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Ccdc88bQ4QRL3 Gm28690-202ENSMUST00000190325 622 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Ccdc88bQ4QRL3 Gm28456-202ENSMUST00000190521 622 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Ccdc88bQ4QRL3 Gm28325-202ENSMUST00000191481 622 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Ccdc88bQ4QRL3 Gm36467-202ENSMUST00000195606 622 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
Ccdc88bQ4QRL3 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.21□□□□□ -1.9
Ccdc88bQ4QRL3 Gm17850-201ENSMUST00000210023 1154 ntBASIC3.21□□□□□ -1.9
Ccdc88bQ4QRL3 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC3.21□□□□□ -1.9
Ccdc88bQ4QRL3 AC140210.1-201ENSMUST00000224961 534 ntBASIC3.21□□□□□ -1.9
Ccdc88bQ4QRL3 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Ccdc88bQ4QRL3 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Ccdc88bQ4QRL3 Gm23140-201ENSMUST00000082487 107 ntBASIC3.21□□□□□ -1.9
Ccdc88bQ4QRL3 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Ccdc88bQ4QRL3 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
Ccdc88bQ4QRL3 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Ccdc88bQ4QRL3 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC3.2□□□□□ -1.9
Ccdc88bQ4QRL3 Gm18558-201ENSMUST00000186253 1214 ntBASIC3.2□□□□□ -1.9
Ccdc88bQ4QRL3 Gm21742-201ENSMUST00000189352 548 ntBASIC3.2□□□□□ -1.9
Ccdc88bQ4QRL3 Gm19269-201ENSMUST00000211401 804 ntBASIC3.2□□□□□ -1.9
Ccdc88bQ4QRL3 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Ccdc88bQ4QRL3 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Ccdc88bQ4QRL3 Gm22304-201ENSMUST00000082688 129 ntBASIC3.2□□□□□ -1.9
Ccdc88bQ4QRL3 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC3.19□□□□□ -1.9
Ccdc88bQ4QRL3 Vmn1r-ps85-201ENSMUST00000173029 890 ntBASIC3.19□□□□□ -1.9
Ccdc88bQ4QRL3 Trbv18-201ENSMUST00000194256 294 ntBASIC3.19□□□□□ -1.9
Ccdc88bQ4QRL3 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Ccdc88bQ4QRL3 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Ccdc88bQ4QRL3 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Ccdc88bQ4QRL3 Gm12803-201ENSMUST00000118907 821 ntBASIC3.18□□□□□ -1.9
Ccdc88bQ4QRL3 Gm22727-201ENSMUST00000158090 116 ntBASIC3.18□□□□□ -1.9
Ccdc88bQ4QRL3 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
Ccdc88bQ4QRL3 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC3.18□□□□□ -1.9
Ccdc88bQ4QRL3 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
Ccdc88bQ4QRL3 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
Ccdc88bQ4QRL3 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Ccdc88bQ4QRL3 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Ccdc88bQ4QRL3 Gm19177-201ENSMUST00000204520 613 ntBASIC3.18□□□□□ -1.9
Ccdc88bQ4QRL3 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Ccdc88bQ4QRL3 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Ccdc88bQ4QRL3 BC051076-202ENSMUST00000199477 2868 ntBASIC3.17□□□□□ -1.9
Ccdc88bQ4QRL3 Gm26171-201ENSMUST00000158422 131 ntBASIC3.17□□□□□ -1.9
Ccdc88bQ4QRL3 Gm24811-201ENSMUST00000175313 100 ntBASIC3.17□□□□□ -1.9
Ccdc88bQ4QRL3 Mir6405-201ENSMUST00000184584 124 ntBASIC3.17□□□□□ -1.9
Ccdc88bQ4QRL3 Gm28744-201ENSMUST00000189939 340 ntBASIC3.17□□□□□ -1.9
Ccdc88bQ4QRL3 AC163646.2-201ENSMUST00000227962 141 ntBASIC3.17□□□□□ -1.9
Ccdc88bQ4QRL3 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Ccdc88bQ4QRL3 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Ccdc88bQ4QRL3 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC3.17□□□□□ -1.9
Ccdc88bQ4QRL3 Olfr1049-202ENSMUST00000216185 1471 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Ccdc88bQ4QRL3 Gm43896-201ENSMUST00000203440 2032 ntBASIC3.17□□□□□ -1.9
Ccdc88bQ4QRL3 Gm25090-201ENSMUST00000104000 132 ntBASIC3.16□□□□□ -1.9
Ccdc88bQ4QRL3 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC3.16□□□□□ -1.9
Ccdc88bQ4QRL3 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC3.16□□□□□ -1.9
Ccdc88bQ4QRL3 Gm24465-201ENSMUST00000178398 107 ntBASIC3.16□□□□□ -1.9
Ccdc88bQ4QRL3 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Ccdc88bQ4QRL3 Gm26652-202ENSMUST00000181672 475 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms