Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm6923-201ENSMUST00000118343 406 ntBASIC3.04□□□□□ -1.92
Trim40Q3UWA4 Gm11438-201ENSMUST00000121582 189 ntBASIC3.04□□□□□ -1.92
Trim40Q3UWA4 Gm11414-201ENSMUST00000121795 263 ntBASIC3.04□□□□□ -1.92
Trim40Q3UWA4 Gm25105-201ENSMUST00000122477 130 ntBASIC3.04□□□□□ -1.92
Trim40Q3UWA4 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trim40Q3UWA4 Gm13901-201ENSMUST00000137252 468 ntBASIC3.04□□□□□ -1.92
Trim40Q3UWA4 Gm26401-201ENSMUST00000158502 76 ntBASIC3.04□□□□□ -1.92
Trim40Q3UWA4 Gm25194-201ENSMUST00000177987 79 ntBASIC3.04□□□□□ -1.92
Trim40Q3UWA4 Gm4761-201ENSMUST00000178086 582 ntBASIC3.04□□□□□ -1.92
Trim40Q3UWA4 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Trim40Q3UWA4 Gm27392-201ENSMUST00000185041 101 ntBASIC3.04□□□□□ -1.92
Trim40Q3UWA4 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC3.04□□□□□ -1.92
Trim40Q3UWA4 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Trim40Q3UWA4 Gm28802-201ENSMUST00000188624 944 ntBASIC3.04□□□□□ -1.92
Trim40Q3UWA4 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trim40Q3UWA4 Gm28437-201ENSMUST00000190277 783 ntBASIC3.04□□□□□ -1.92
Trim40Q3UWA4 Gm19066-201ENSMUST00000193232 1078 ntBASIC3.04□□□□□ -1.92
Trim40Q3UWA4 Mir129b-201ENSMUST00000197461 65 ntBASIC3.04□□□□□ -1.92
Trim40Q3UWA4 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC3.04□□□□□ -1.92
Trim40Q3UWA4 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Trim40Q3UWA4 Gm44513-201ENSMUST00000206811 439 ntBASIC3.04□□□□□ -1.92
Trim40Q3UWA4 Gm44718-201ENSMUST00000206886 359 ntBASIC3.04□□□□□ -1.92
Trim40Q3UWA4 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC3.04□□□□□ -1.92
Trim40Q3UWA4 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC3.04□□□□□ -1.92
Trim40Q3UWA4 AC153541.1-201ENSMUST00000213786 294 ntBASIC3.04□□□□□ -1.92
Trim40Q3UWA4 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC3.04□□□□□ -1.92
Trim40Q3UWA4 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC3.04□□□□□ -1.92
Trim40Q3UWA4 AC157017.2-201ENSMUST00000218354 777 ntBASIC3.04□□□□□ -1.92
Trim40Q3UWA4 AC101677.1-201ENSMUST00000218590 158 ntBASIC3.04□□□□□ -1.92
Trim40Q3UWA4 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
Trim40Q3UWA4 Gm18116-201ENSMUST00000220920 537 ntBASIC3.04□□□□□ -1.92
Trim40Q3UWA4 Gm8231-201ENSMUST00000221617 783 ntBASIC3.04□□□□□ -1.92
Trim40Q3UWA4 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Trim40Q3UWA4 AC160930.1-201ENSMUST00000227194 337 ntBASIC3.04□□□□□ -1.92
Trim40Q3UWA4 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trim40Q3UWA4 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.04□□□□□ -1.92
Trim40Q3UWA4 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
Trim40Q3UWA4 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Trim40Q3UWA4 Olfr1162-202ENSMUST00000183862 4800 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
Trim40Q3UWA4 Gm37848-201ENSMUST00000195288 3103 ntBASIC3.03□□□□□ -1.92
Trim40Q3UWA4 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.03□□□□□ -1.92
Trim40Q3UWA4 Gm22758-201ENSMUST00000102275 96 ntBASIC3.03□□□□□ -1.92
Trim40Q3UWA4 Gm25563-201ENSMUST00000104603 74 ntBASIC3.03□□□□□ -1.92
Trim40Q3UWA4 Gm11008-201ENSMUST00000109032 622 ntTSL 5 BASIC3.03□□□□□ -1.92
Trim40Q3UWA4 Gm22072-201ENSMUST00000116850 121 ntBASIC3.03□□□□□ -1.92
Trim40Q3UWA4 Gm12149-201ENSMUST00000117511 654 ntBASIC3.03□□□□□ -1.92
Trim40Q3UWA4 Gm13349-201ENSMUST00000118436 411 ntBASIC3.03□□□□□ -1.92
Trim40Q3UWA4 Gm15060-201ENSMUST00000119550 948 ntBASIC3.03□□□□□ -1.92
Trim40Q3UWA4 Gm13210-201ENSMUST00000121483 273 ntBASIC3.03□□□□□ -1.92
Trim40Q3UWA4 Gm15065-201ENSMUST00000121699 273 ntBASIC3.03□□□□□ -1.92
Trim40Q3UWA4 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Trim40Q3UWA4 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Trim40Q3UWA4 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
Trim40Q3UWA4 Gm26348-201ENSMUST00000157528 240 ntBASIC3.03□□□□□ -1.92
Trim40Q3UWA4 Gm23755-201ENSMUST00000157578 343 ntBASIC3.03□□□□□ -1.92
Trim40Q3UWA4 Gm22390-201ENSMUST00000157588 325 ntBASIC3.03□□□□□ -1.92
Trim40Q3UWA4 Gm23084-201ENSMUST00000157850 114 ntBASIC3.03□□□□□ -1.92
Trim40Q3UWA4 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Trim40Q3UWA4 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC3.03□□□□□ -1.92
Trim40Q3UWA4 Gm25451-201ENSMUST00000177832 121 ntBASIC3.03□□□□□ -1.92
Trim40Q3UWA4 Gm17535-201ENSMUST00000178641 672 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Trim40Q3UWA4 Gm24897-201ENSMUST00000179033 107 ntBASIC3.03□□□□□ -1.92
Trim40Q3UWA4 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Trim40Q3UWA4 Mir6963-201ENSMUST00000183535 71 ntBASIC3.03□□□□□ -1.92
Trim40Q3UWA4 Gm29073-201ENSMUST00000185563 664 ntBASIC3.03□□□□□ -1.92
Trim40Q3UWA4 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC3.03□□□□□ -1.92
Trim40Q3UWA4 Gm28666-201ENSMUST00000186649 274 ntBASIC3.03□□□□□ -1.92
Trim40Q3UWA4 Gm29165-201ENSMUST00000190655 664 ntBASIC3.03□□□□□ -1.92
Trim40Q3UWA4 Gm29211-201ENSMUST00000191470 664 ntBASIC3.03□□□□□ -1.92
Trim40Q3UWA4 Gm36966-201ENSMUST00000192217 413 ntBASIC3.03□□□□□ -1.92
Trim40Q3UWA4 Gm43245-201ENSMUST00000197603 468 ntBASIC3.03□□□□□ -1.92
Trim40Q3UWA4 Gm43114-201ENSMUST00000198298 343 ntBASIC3.03□□□□□ -1.92
Trim40Q3UWA4 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.03□□□□□ -1.92
Trim40Q3UWA4 Gm43232-201ENSMUST00000201346 364 ntBASIC3.03□□□□□ -1.92
Trim40Q3UWA4 Crs-ps-201ENSMUST00000203723 760 ntBASIC3.03□□□□□ -1.92
Trim40Q3UWA4 Gm45226-201ENSMUST00000206602 288 ntBASIC3.03□□□□□ -1.92
Trim40Q3UWA4 Gm45048-201ENSMUST00000207058 429 ntBASIC3.03□□□□□ -1.92
Trim40Q3UWA4 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC3.03□□□□□ -1.92
Trim40Q3UWA4 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC3.03□□□□□ -1.92
Trim40Q3UWA4 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC3.03□□□□□ -1.92
Trim40Q3UWA4 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC3.03□□□□□ -1.92
Trim40Q3UWA4 Gm46369-201ENSMUST00000221577 401 ntBASIC3.03□□□□□ -1.92
Trim40Q3UWA4 AC122484.1-201ENSMUST00000221578 177 ntBASIC3.03□□□□□ -1.92
Trim40Q3UWA4 4930453C13Rik-201ENSMUST00000222376 765 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Trim40Q3UWA4 AC168059.2-201ENSMUST00000224473 333 ntBASIC3.03□□□□□ -1.92
Trim40Q3UWA4 AC147633.1-201ENSMUST00000225134 259 ntBASIC3.03□□□□□ -1.92
Trim40Q3UWA4 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC3.03□□□□□ -1.92
Trim40Q3UWA4 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Trim40Q3UWA4 Gm23738-201ENSMUST00000082828 171 ntBASIC3.03□□□□□ -1.92
Trim40Q3UWA4 Gm22739-201ENSMUST00000083437 160 ntBASIC3.03□□□□□ -1.92
Trim40Q3UWA4 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Trim40Q3UWA4 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.03□□□□□ -1.93
Trim40Q3UWA4 Gm14445-201ENSMUST00000117051 1484 ntBASIC3.03□□□□□ -1.93
Trim40Q3UWA4 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Trim40Q3UWA4 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Trim40Q3UWA4 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.02□□□□□ -1.93
Trim40Q3UWA4 Mir193b-201ENSMUST00000103784 79 ntBASIC3.02□□□□□ -1.93
Trim40Q3UWA4 Gm23577-201ENSMUST00000103950 110 ntBASIC3.02□□□□□ -1.93
Trim40Q3UWA4 Gm24987-201ENSMUST00000104453 134 ntBASIC3.02□□□□□ -1.93
Trim40Q3UWA4 Defa-ps9-201ENSMUST00000118264 276 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 97.3 ms