Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Mir7118-201ENSMUST00000197760 61 ntBASIC2.95□□□□□ -1.94
Upf3aQ3ULJ3 Gm43659-201ENSMUST00000200894 628 ntBASIC2.95□□□□□ -1.94
Upf3aQ3ULJ3 Gm44274-201ENSMUST00000203417 256 ntBASIC2.95□□□□□ -1.94
Upf3aQ3ULJ3 Gm19563-201ENSMUST00000222031 270 ntBASIC2.95□□□□□ -1.94
Upf3aQ3ULJ3 AC160958.1-201ENSMUST00000224833 368 ntBASIC2.95□□□□□ -1.94
Upf3aQ3ULJ3 AC113031.2-201ENSMUST00000226132 579 ntBASIC2.95□□□□□ -1.94
Upf3aQ3ULJ3 AC163664.1-201ENSMUST00000226251 1248 ntBASIC2.95□□□□□ -1.94
Upf3aQ3ULJ3 Olfr1463-201ENSMUST00000064102 933 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Upf3aQ3ULJ3 Mir21a-201ENSMUST00000083521 92 ntBASIC2.95□□□□□ -1.94
Upf3aQ3ULJ3 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Upf3aQ3ULJ3 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Upf3aQ3ULJ3 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
Upf3aQ3ULJ3 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC2.94□□□□□ -1.94
Upf3aQ3ULJ3 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Upf3aQ3ULJ3 Gm14971-201ENSMUST00000117980 663 ntBASIC2.94□□□□□ -1.94
Upf3aQ3ULJ3 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC2.94□□□□□ -1.94
Upf3aQ3ULJ3 Gm14600-201ENSMUST00000121032 630 ntBASIC2.94□□□□□ -1.94
Upf3aQ3ULJ3 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC2.94□□□□□ -1.94
Upf3aQ3ULJ3 Gm24291-201ENSMUST00000157633 162 ntBASIC2.94□□□□□ -1.94
Upf3aQ3ULJ3 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC2.94□□□□□ -1.94
Upf3aQ3ULJ3 Gm23963-201ENSMUST00000179603 77 ntBASIC2.94□□□□□ -1.94
Upf3aQ3ULJ3 Gm27522-201ENSMUST00000183949 230 ntBASIC2.94□□□□□ -1.94
Upf3aQ3ULJ3 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
Upf3aQ3ULJ3 Olfr1055-202ENSMUST00000188023 939 ntBASIC2.94□□□□□ -1.94
Upf3aQ3ULJ3 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC2.94□□□□□ -1.94
Upf3aQ3ULJ3 Trav12-4-201ENSMUST00000200663 271 ntBASIC2.94□□□□□ -1.94
Upf3aQ3ULJ3 Gm43979-201ENSMUST00000203179 475 ntBASIC2.94□□□□□ -1.94
Upf3aQ3ULJ3 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC2.94□□□□□ -1.94
Upf3aQ3ULJ3 Gm19233-201ENSMUST00000219772 936 ntBASIC2.94□□□□□ -1.94
Upf3aQ3ULJ3 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC2.94□□□□□ -1.94
Upf3aQ3ULJ3 AC154224.1-201ENSMUST00000224367 403 ntBASIC2.94□□□□□ -1.94
Upf3aQ3ULJ3 Olfr191-201ENSMUST00000078517 930 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
Upf3aQ3ULJ3 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Upf3aQ3ULJ3 Gm23738-201ENSMUST00000082828 171 ntBASIC2.94□□□□□ -1.94
Upf3aQ3ULJ3 Mir350-201ENSMUST00000083639 99 ntBASIC2.94□□□□□ -1.94
Upf3aQ3ULJ3 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
Upf3aQ3ULJ3 Gm10343-201ENSMUST00000096279 348 ntBASIC2.94□□□□□ -1.94
Upf3aQ3ULJ3 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC2.94□□□□□ -1.94
Upf3aQ3ULJ3 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Upf3aQ3ULJ3 AC164297.6-201ENSMUST00000224643 1568 ntBASIC2.94□□□□□ -1.94
Upf3aQ3ULJ3 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC2.94□□□□□ -1.94
Upf3aQ3ULJ3 Gm38083-201ENSMUST00000194758 3498 ntBASIC2.94□□□□□ -1.94
Upf3aQ3ULJ3 Gm42852-201ENSMUST00000202649 1379 ntBASIC2.93□□□□□ -1.94
Upf3aQ3ULJ3 Mir208b-201ENSMUST00000104735 77 ntBASIC2.93□□□□□ -1.94
Upf3aQ3ULJ3 Gm14879-201ENSMUST00000117308 507 ntBASIC2.93□□□□□ -1.94
Upf3aQ3ULJ3 Gm2003-201ENSMUST00000118537 636 ntBASIC2.93□□□□□ -1.94
Upf3aQ3ULJ3 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC2.93□□□□□ -1.94
Upf3aQ3ULJ3 Gm1989-201ENSMUST00000126244 636 ntBASIC2.93□□□□□ -1.94
Upf3aQ3ULJ3 Gm24681-201ENSMUST00000158760 107 ntBASIC2.93□□□□□ -1.94
Upf3aQ3ULJ3 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC2.93□□□□□ -1.94
Upf3aQ3ULJ3 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC2.93□□□□□ -1.94
Upf3aQ3ULJ3 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Upf3aQ3ULJ3 Gm42896-201ENSMUST00000201249 1113 ntBASIC2.93□□□□□ -1.94
Upf3aQ3ULJ3 Gm19177-201ENSMUST00000204520 613 ntBASIC2.93□□□□□ -1.94
Upf3aQ3ULJ3 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Upf3aQ3ULJ3 Gm45588-201ENSMUST00000211213 630 ntBASIC2.93□□□□□ -1.94
Upf3aQ3ULJ3 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Upf3aQ3ULJ3 AC166113.1-201ENSMUST00000225258 475 ntBASIC2.93□□□□□ -1.94
Upf3aQ3ULJ3 AC155314.1-201ENSMUST00000227624 508 ntBASIC2.93□□□□□ -1.94
Upf3aQ3ULJ3 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
Upf3aQ3ULJ3 Gm45039-201ENSMUST00000209181 3477 ntBASIC2.93□□□□□ -1.94
Upf3aQ3ULJ3 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Upf3aQ3ULJ3 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
Upf3aQ3ULJ3 Gm19074-201ENSMUST00000218915 1429 ntBASIC2.93□□□□□ -1.94
Upf3aQ3ULJ3 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
Upf3aQ3ULJ3 Mctp1-202ENSMUST00000109589 1653 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
Upf3aQ3ULJ3 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
Upf3aQ3ULJ3 Gm14897-201ENSMUST00000118213 207 ntBASIC2.92□□□□□ -1.94
Upf3aQ3ULJ3 Gm11253-201ENSMUST00000118486 201 ntBASIC2.92□□□□□ -1.94
Upf3aQ3ULJ3 Gm12954-201ENSMUST00000118610 611 ntBASIC2.92□□□□□ -1.94
Upf3aQ3ULJ3 Gm15037-201ENSMUST00000120358 259 ntBASIC2.92□□□□□ -1.94
Upf3aQ3ULJ3 Gm14506-201ENSMUST00000121165 536 ntBASIC2.92□□□□□ -1.94
Upf3aQ3ULJ3 Gm16236-201ENSMUST00000159588 379 ntBASIC2.92□□□□□ -1.94
Upf3aQ3ULJ3 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC2.92□□□□□ -1.94
Upf3aQ3ULJ3 Gm26365-201ENSMUST00000179177 94 ntBASIC2.92□□□□□ -1.94
Upf3aQ3ULJ3 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
Upf3aQ3ULJ3 Gm18727-201ENSMUST00000185981 553 ntBASIC2.92□□□□□ -1.94
Upf3aQ3ULJ3 Npn2-202ENSMUST00000189275 235 ntBASIC2.92□□□□□ -1.94
Upf3aQ3ULJ3 Gm43493-201ENSMUST00000199837 202 ntBASIC2.92□□□□□ -1.94
Upf3aQ3ULJ3 Gm44332-201ENSMUST00000203712 433 ntBASIC2.92□□□□□ -1.94
Upf3aQ3ULJ3 Olfr1542-ps1-201ENSMUST00000204175 752 ntBASIC2.92□□□□□ -1.94
Upf3aQ3ULJ3 Gm19137-201ENSMUST00000213790 1164 ntBASIC2.92□□□□□ -1.94
Upf3aQ3ULJ3 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Upf3aQ3ULJ3 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Upf3aQ3ULJ3 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
Upf3aQ3ULJ3 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC2.92□□□□□ -1.94
Upf3aQ3ULJ3 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.92□□□□□ -1.94
Upf3aQ3ULJ3 Gm38278-201ENSMUST00000194715 1365 ntBASIC2.91□□□□□ -1.94
Upf3aQ3ULJ3 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Upf3aQ3ULJ3 Mir667-201ENSMUST00000102441 92 ntBASIC2.91□□□□□ -1.94
Upf3aQ3ULJ3 Gm2348-201ENSMUST00000108782 300 ntBASIC2.91□□□□□ -1.94
Upf3aQ3ULJ3 Vmn1r-ps106-201ENSMUST00000120587 824 ntBASIC2.91□□□□□ -1.94
Upf3aQ3ULJ3 Gm15719-201ENSMUST00000120619 635 ntBASIC2.91□□□□□ -1.94
Upf3aQ3ULJ3 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC2.91□□□□□ -1.94
Upf3aQ3ULJ3 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC2.91□□□□□ -1.94
Upf3aQ3ULJ3 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
Upf3aQ3ULJ3 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC2.91□□□□□ -1.94
Upf3aQ3ULJ3 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Upf3aQ3ULJ3 Gm27921-201ENSMUST00000183968 108 ntBASIC2.91□□□□□ -1.94
Upf3aQ3ULJ3 Gm28900-201ENSMUST00000185232 156 ntBASIC2.91□□□□□ -1.94
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms