Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm18448-201ENSMUST00000186286 599 ntBASIC3.02□□□□□ -1.93
Trafd1Q3UDK1 Gm37866-201ENSMUST00000191950 696 ntBASIC3.02□□□□□ -1.93
Trafd1Q3UDK1 Gm19620-201ENSMUST00000195972 434 ntBASIC3.02□□□□□ -1.93
Trafd1Q3UDK1 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC3.02□□□□□ -1.93
Trafd1Q3UDK1 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Trafd1Q3UDK1 Gm43810-201ENSMUST00000201018 232 ntBASIC3.02□□□□□ -1.93
Trafd1Q3UDK1 Gm43954-201ENSMUST00000204634 544 ntBASIC3.02□□□□□ -1.93
Trafd1Q3UDK1 Gm45146-201ENSMUST00000207108 221 ntBASIC3.02□□□□□ -1.93
Trafd1Q3UDK1 AC156795.1-201ENSMUST00000214655 414 ntBASIC3.02□□□□□ -1.93
Trafd1Q3UDK1 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.02□□□□□ -1.93
Trafd1Q3UDK1 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC3.02□□□□□ -1.93
Trafd1Q3UDK1 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.02□□□□□ -1.93
Trafd1Q3UDK1 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Trafd1Q3UDK1 Gm25126-201ENSMUST00000083343 102 ntBASIC3.02□□□□□ -1.93
Trafd1Q3UDK1 Mir184-201ENSMUST00000083662 69 ntBASIC3.02□□□□□ -1.93
Trafd1Q3UDK1 Mir16-2-201ENSMUST00000083672 95 ntBASIC3.02□□□□□ -1.93
Trafd1Q3UDK1 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
Trafd1Q3UDK1 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Trafd1Q3UDK1 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC3.02□□□□□ -1.93
Trafd1Q3UDK1 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.02□□□□□ -1.93
Trafd1Q3UDK1 Olfr109-203ENSMUST00000214938 5550 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Trafd1Q3UDK1 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Trafd1Q3UDK1 Gm24119-201ENSMUST00000103979 246 ntBASIC3.01□□□□□ -1.93
Trafd1Q3UDK1 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Trafd1Q3UDK1 Gm15025-201ENSMUST00000118434 418 ntBASIC3.01□□□□□ -1.93
Trafd1Q3UDK1 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.01□□□□□ -1.93
Trafd1Q3UDK1 Gm11835-201ENSMUST00000120635 663 ntBASIC3.01□□□□□ -1.93
Trafd1Q3UDK1 Gm15190-201ENSMUST00000120855 276 ntBASIC3.01□□□□□ -1.93
Trafd1Q3UDK1 Gm23213-201ENSMUST00000122715 313 ntBASIC3.01□□□□□ -1.93
Trafd1Q3UDK1 Gm13941-201ENSMUST00000127918 736 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
Trafd1Q3UDK1 Gm7346-201ENSMUST00000169661 476 ntBASIC3.01□□□□□ -1.93
Trafd1Q3UDK1 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Trafd1Q3UDK1 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC3.01□□□□□ -1.93
Trafd1Q3UDK1 Gm29104-201ENSMUST00000186304 222 ntBASIC3.01□□□□□ -1.93
Trafd1Q3UDK1 Gm29389-201ENSMUST00000191562 352 ntBASIC3.01□□□□□ -1.93
Trafd1Q3UDK1 Gm37946-201ENSMUST00000192064 347 ntBASIC3.01□□□□□ -1.93
Trafd1Q3UDK1 Gm37576-201ENSMUST00000194228 372 ntBASIC3.01□□□□□ -1.93
Trafd1Q3UDK1 Gm35212-201ENSMUST00000196672 606 ntBASIC3.01□□□□□ -1.93
Trafd1Q3UDK1 Gm42509-201ENSMUST00000197390 781 ntBASIC3.01□□□□□ -1.93
Trafd1Q3UDK1 Gm44393-201ENSMUST00000197418 138 ntBASIC3.01□□□□□ -1.93
Trafd1Q3UDK1 Gm43746-201ENSMUST00000200028 317 ntBASIC3.01□□□□□ -1.93
Trafd1Q3UDK1 Gm45513-201ENSMUST00000210228 376 ntBASIC3.01□□□□□ -1.93
Trafd1Q3UDK1 AC153529.1-201ENSMUST00000217818 370 ntBASIC3.01□□□□□ -1.93
Trafd1Q3UDK1 AC117814.1-201ENSMUST00000226135 352 ntBASIC3.01□□□□□ -1.93
Trafd1Q3UDK1 Gm9845-201ENSMUST00000056409 598 ntBASIC3.01□□□□□ -1.93
Trafd1Q3UDK1 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Trafd1Q3UDK1 Gm26129-201ENSMUST00000082719 107 ntBASIC3.01□□□□□ -1.93
Trafd1Q3UDK1 n-R5s79-201ENSMUST00000083071 120 ntBASIC3.01□□□□□ -1.93
Trafd1Q3UDK1 Gm24446-201ENSMUST00000083982 156 ntBASIC3.01□□□□□ -1.93
Trafd1Q3UDK1 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
Trafd1Q3UDK1 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.01□□□□□ -1.93
Trafd1Q3UDK1 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
Trafd1Q3UDK1 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Trafd1Q3UDK1 Gm43300-201ENSMUST00000198540 2043 ntBASIC3□□□□□ -1.93
Trafd1Q3UDK1 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC3□□□□□ -1.93
Trafd1Q3UDK1 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
Trafd1Q3UDK1 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
Trafd1Q3UDK1 Gm22091-201ENSMUST00000116908 127 ntBASIC3□□□□□ -1.93
Trafd1Q3UDK1 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC3□□□□□ -1.93
Trafd1Q3UDK1 Gm25334-201ENSMUST00000158036 110 ntBASIC3□□□□□ -1.93
Trafd1Q3UDK1 Gm2855-201ENSMUST00000166765 456 ntBASIC3□□□□□ -1.93
Trafd1Q3UDK1 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Trafd1Q3UDK1 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
Trafd1Q3UDK1 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
Trafd1Q3UDK1 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
Trafd1Q3UDK1 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Trafd1Q3UDK1 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
Trafd1Q3UDK1 Gm27755-201ENSMUST00000184623 132 ntBASIC3□□□□□ -1.93
Trafd1Q3UDK1 Gm28358-202ENSMUST00000189292 223 ntBASIC3□□□□□ -1.93
Trafd1Q3UDK1 Gm37751-201ENSMUST00000192440 1198 ntBASIC3□□□□□ -1.93
Trafd1Q3UDK1 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC3□□□□□ -1.93
Trafd1Q3UDK1 Gm18384-201ENSMUST00000195974 808 ntBASIC3□□□□□ -1.93
Trafd1Q3UDK1 Gm25203-202ENSMUST00000200458 216 ntBASIC3□□□□□ -1.93
Trafd1Q3UDK1 Gm43384-201ENSMUST00000200569 637 ntBASIC3□□□□□ -1.93
Trafd1Q3UDK1 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC3□□□□□ -1.93
Trafd1Q3UDK1 Gm18691-201ENSMUST00000203593 872 ntBASIC3□□□□□ -1.93
Trafd1Q3UDK1 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC3□□□□□ -1.93
Trafd1Q3UDK1 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC3□□□□□ -1.93
Trafd1Q3UDK1 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC3□□□□□ -1.93
Trafd1Q3UDK1 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC3□□□□□ -1.93
Trafd1Q3UDK1 AC159297.2-201ENSMUST00000219567 1075 ntBASIC3□□□□□ -1.93
Trafd1Q3UDK1 Gm8274-201ENSMUST00000219820 463 ntBASIC3□□□□□ -1.93
Trafd1Q3UDK1 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
Trafd1Q3UDK1 4930469K13Rik-202ENSMUST00000223852 537 ntAPPRIS P5 BASIC3□□□□□ -1.93
Trafd1Q3UDK1 AC154484.1-201ENSMUST00000227311 771 ntBASIC3□□□□□ -1.93
Trafd1Q3UDK1 Gm25203-201ENSMUST00000082842 215 ntBASIC3□□□□□ -1.93
Trafd1Q3UDK1 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
Trafd1Q3UDK1 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3□□□□□ -1.93
Trafd1Q3UDK1 Olfr1028-201ENSMUST00000080698 3474 ntAPPRIS P1 BASIC3□□□□□ -1.93
Trafd1Q3UDK1 Zfp640-202ENSMUST00000224116 1562 ntBASIC3□□□□□ -1.93
Trafd1Q3UDK1 Gm43715-201ENSMUST00000196307 2715 ntBASIC2.99□□□□□ -1.93
Trafd1Q3UDK1 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
Trafd1Q3UDK1 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC2.99□□□□□ -1.93
Trafd1Q3UDK1 Mir592-201ENSMUST00000102113 96 ntBASIC2.99□□□□□ -1.93
Trafd1Q3UDK1 Mir669p-2-201ENSMUST00000103868 87 ntBASIC2.99□□□□□ -1.93
Trafd1Q3UDK1 Mir669p-1-201ENSMUST00000103884 87 ntBASIC2.99□□□□□ -1.93
Trafd1Q3UDK1 Gm15087-201ENSMUST00000117465 1172 ntBASIC2.99□□□□□ -1.93
Trafd1Q3UDK1 Gm15231-201ENSMUST00000119174 447 ntBASIC2.99□□□□□ -1.93
Trafd1Q3UDK1 Gm14240-201ENSMUST00000120353 546 ntBASIC2.99□□□□□ -1.93
Trafd1Q3UDK1 Gm16445-201ENSMUST00000120399 714 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 145.3 ms