Protein–RNA interactions for Protein: Q3U319

Rnf40, E3 ubiquitin-protein ligase BRE1B, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40Q3U319 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
Rnf40Q3U319 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Rnf40Q3U319 AC115289.2-201ENSMUST00000223836 2803 ntBASIC5.56□□□□□ -1.52
Rnf40Q3U319 Gm24235-201ENSMUST00000104319 129 ntBASIC5.56□□□□□ -1.52
Rnf40Q3U319 Gm14894-201ENSMUST00000117170 270 ntBASIC5.56□□□□□ -1.52
Rnf40Q3U319 Gm15497-201ENSMUST00000119137 551 ntBASIC5.56□□□□□ -1.52
Rnf40Q3U319 Gm13210-201ENSMUST00000121483 273 ntBASIC5.56□□□□□ -1.52
Rnf40Q3U319 Gm15065-201ENSMUST00000121699 273 ntBASIC5.56□□□□□ -1.52
Rnf40Q3U319 Gm25290-201ENSMUST00000122796 144 ntBASIC5.56□□□□□ -1.52
Rnf40Q3U319 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC5.56□□□□□ -1.52
Rnf40Q3U319 Gm14343-201ENSMUST00000154524 731 ntTSL 3 BASIC5.56□□□□□ -1.52
Rnf40Q3U319 Gm25227-201ENSMUST00000158204 112 ntBASIC5.56□□□□□ -1.52
Rnf40Q3U319 Mir6335-201ENSMUST00000184081 98 ntBASIC5.56□□□□□ -1.52
Rnf40Q3U319 Gm29603-201ENSMUST00000186792 334 ntBASIC5.56□□□□□ -1.52
Rnf40Q3U319 Gm37449-201ENSMUST00000193016 270 ntBASIC5.56□□□□□ -1.52
Rnf40Q3U319 Gm18658-201ENSMUST00000195558 270 ntBASIC5.56□□□□□ -1.52
Rnf40Q3U319 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC5.56□□□□□ -1.52
Rnf40Q3U319 AC157476.1-201ENSMUST00000215555 169 ntBASIC5.56□□□□□ -1.52
Rnf40Q3U319 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC5.56□□□□□ -1.52
Rnf40Q3U319 AC165347.1-201ENSMUST00000224089 1025 ntBASIC5.56□□□□□ -1.52
Rnf40Q3U319 AC165415.1-201ENSMUST00000228924 273 ntBASIC5.56□□□□□ -1.52
Rnf40Q3U319 Gm23517-201ENSMUST00000082830 192 ntBASIC5.56□□□□□ -1.52
Rnf40Q3U319 Gm24032-201ENSMUST00000083932 159 ntBASIC5.56□□□□□ -1.52
Rnf40Q3U319 Gm43300-201ENSMUST00000198540 2043 ntBASIC5.56□□□□□ -1.52
Rnf40Q3U319 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Rnf40Q3U319 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Rnf40Q3U319 Zfp951-202ENSMUST00000186219 2904 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
Rnf40Q3U319 Gm37006-201ENSMUST00000195253 2674 ntBASIC5.56□□□□□ -1.52
Rnf40Q3U319 Gm8980-201ENSMUST00000140232 2197 ntBASIC5.56□□□□□ -1.52
Rnf40Q3U319 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC5.56□□□□□ -1.52
Rnf40Q3U319 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Rnf40Q3U319 Olfr1389-202ENSMUST00000216641 3707 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Rnf40Q3U319 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Rnf40Q3U319 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
Rnf40Q3U319 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Rnf40Q3U319 Tlr13-201ENSMUST00000040065 4060 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Rnf40Q3U319 Mdn1-201ENSMUST00000071642 17970 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Rnf40Q3U319 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Rnf40Q3U319 Vmn1r30-205ENSMUST00000228635 1776 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Rnf40Q3U319 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Rnf40Q3U319 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
Rnf40Q3U319 Gm24172-201ENSMUST00000104127 117 ntBASIC5.55□□□□□ -1.52
Rnf40Q3U319 Gm24069-201ENSMUST00000104512 127 ntBASIC5.55□□□□□ -1.52
Rnf40Q3U319 Gm13321-201ENSMUST00000117101 400 ntBASIC5.55□□□□□ -1.52
Rnf40Q3U319 Gm22217-201ENSMUST00000157556 313 ntBASIC5.55□□□□□ -1.52
Rnf40Q3U319 Gm22098-201ENSMUST00000157930 85 ntBASIC5.55□□□□□ -1.52
Rnf40Q3U319 Gm22767-201ENSMUST00000158365 165 ntBASIC5.55□□□□□ -1.52
Rnf40Q3U319 Gm26157-201ENSMUST00000158974 126 ntBASIC5.55□□□□□ -1.52
Rnf40Q3U319 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Rnf40Q3U319 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Rnf40Q3U319 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Rnf40Q3U319 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC5.55□□□□□ -1.52
Rnf40Q3U319 Ighv15-1-201ENSMUST00000194450 276 ntBASIC5.55□□□□□ -1.52
Rnf40Q3U319 Gm43704-201ENSMUST00000196164 496 ntBASIC5.55□□□□□ -1.52
Rnf40Q3U319 Igkv12-66-201ENSMUST00000199305 348 ntBASIC5.55□□□□□ -1.52
Rnf40Q3U319 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC5.55□□□□□ -1.52
Rnf40Q3U319 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC5.55□□□□□ -1.52
Rnf40Q3U319 Gm6303-201ENSMUST00000210123 471 ntBASIC5.55□□□□□ -1.52
Rnf40Q3U319 AC183268.2-201ENSMUST00000214513 446 ntBASIC5.55□□□□□ -1.52
Rnf40Q3U319 CT030247.1-201ENSMUST00000216810 267 ntBASIC5.55□□□□□ -1.52
Rnf40Q3U319 AC161114.1-201ENSMUST00000218223 474 ntBASIC5.55□□□□□ -1.52
Rnf40Q3U319 Gm18502-201ENSMUST00000218679 199 ntBASIC5.55□□□□□ -1.52
Rnf40Q3U319 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC5.55□□□□□ -1.52
Rnf40Q3U319 AC154846.2-201ENSMUST00000228805 424 ntBASIC5.55□□□□□ -1.52
Rnf40Q3U319 Gm9818-201ENSMUST00000050900 255 ntBASIC5.55□□□□□ -1.52
Rnf40Q3U319 Gm9174-201ENSMUST00000078149 255 ntBASIC5.55□□□□□ -1.52
Rnf40Q3U319 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Rnf40Q3U319 Gm24762-201ENSMUST00000083689 104 ntBASIC5.55□□□□□ -1.52
Rnf40Q3U319 Gm42923-201ENSMUST00000198438 2896 ntBASIC5.55□□□□□ -1.52
Rnf40Q3U319 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC5.55□□□□□ -1.52
Rnf40Q3U319 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
Rnf40Q3U319 Gm44535-201ENSMUST00000208889 3136 ntBASIC5.54□□□□□ -1.52
Rnf40Q3U319 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.54□□□□□ -1.52
Rnf40Q3U319 Gm43010-201ENSMUST00000195993 2878 ntBASIC5.54□□□□□ -1.52
Rnf40Q3U319 Gm2033-201ENSMUST00000210753 2287 ntBASIC5.54□□□□□ -1.52
Rnf40Q3U319 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Rnf40Q3U319 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Rnf40Q3U319 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Rnf40Q3U319 Gm13772-201ENSMUST00000118431 317 ntBASIC5.54□□□□□ -1.52
Rnf40Q3U319 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC5.54□□□□□ -1.52
Rnf40Q3U319 Gm25985-201ENSMUST00000122677 107 ntBASIC5.54□□□□□ -1.52
Rnf40Q3U319 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC5.54□□□□□ -1.52
Rnf40Q3U319 Gm25637-201ENSMUST00000157529 107 ntBASIC5.54□□□□□ -1.52
Rnf40Q3U319 Gm26097-201ENSMUST00000179642 93 ntBASIC5.54□□□□□ -1.52
Rnf40Q3U319 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Rnf40Q3U319 Gm38237-201ENSMUST00000193366 376 ntBASIC5.54□□□□□ -1.52
Rnf40Q3U319 Mirlet7e-201ENSMUST00000196737 93 ntBASIC5.54□□□□□ -1.52
Rnf40Q3U319 Gm8874-201ENSMUST00000196826 286 ntBASIC5.54□□□□□ -1.52
Rnf40Q3U319 Gm43444-201ENSMUST00000198123 291 ntBASIC5.54□□□□□ -1.52
Rnf40Q3U319 Gm18325-201ENSMUST00000203228 835 ntBASIC5.54□□□□□ -1.52
Rnf40Q3U319 Glud-ps-201ENSMUST00000206310 657 ntBASIC5.54□□□□□ -1.52
Rnf40Q3U319 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC5.54□□□□□ -1.52
Rnf40Q3U319 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
Rnf40Q3U319 n-R5s205-201ENSMUST00000083149 125 ntBASIC5.54□□□□□ -1.52
Rnf40Q3U319 Mir133a-1-201ENSMUST00000083465 68 ntBASIC5.54□□□□□ -1.52
Rnf40Q3U319 Mir138-1-201ENSMUST00000083480 99 ntBASIC5.54□□□□□ -1.52
Rnf40Q3U319 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Rnf40Q3U319 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Rnf40Q3U319 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Rnf40Q3U319 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms