Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Trpc5os-201ENSMUST00000155206 3585 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Col8a1Q00780 Gm37099-201ENSMUST00000191902 3451 ntBASIC3.95□□□□□ -1.78
Col8a1Q00780 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Col8a1Q00780 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Col8a1Q00780 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
Col8a1Q00780 Gm24581-201ENSMUST00000103962 133 ntBASIC3.95□□□□□ -1.78
Col8a1Q00780 Gm24120-201ENSMUST00000103978 129 ntBASIC3.95□□□□□ -1.78
Col8a1Q00780 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC3.95□□□□□ -1.78
Col8a1Q00780 Gm14559-201ENSMUST00000121745 496 ntBASIC3.95□□□□□ -1.78
Col8a1Q00780 Gm25106-201ENSMUST00000122672 134 ntBASIC3.95□□□□□ -1.78
Col8a1Q00780 n-R5s21-201ENSMUST00000122692 117 ntBASIC3.95□□□□□ -1.78
Col8a1Q00780 Gm14298-201ENSMUST00000139032 237 ntBASIC3.95□□□□□ -1.78
Col8a1Q00780 Gm16356-201ENSMUST00000143300 169 ntBASIC3.95□□□□□ -1.78
Col8a1Q00780 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Col8a1Q00780 Gm8114-201ENSMUST00000172225 484 ntBASIC3.95□□□□□ -1.78
Col8a1Q00780 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC3.95□□□□□ -1.78
Col8a1Q00780 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Col8a1Q00780 Gm23725-201ENSMUST00000177876 107 ntBASIC3.95□□□□□ -1.78
Col8a1Q00780 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Col8a1Q00780 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Col8a1Q00780 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC3.95□□□□□ -1.78
Col8a1Q00780 Mir7062-201ENSMUST00000185038 66 ntBASIC3.95□□□□□ -1.78
Col8a1Q00780 Gm28163-201ENSMUST00000187099 325 ntBASIC3.95□□□□□ -1.78
Col8a1Q00780 Gm19774-201ENSMUST00000190667 114 ntBASIC3.95□□□□□ -1.78
Col8a1Q00780 Gm5552-201ENSMUST00000197149 515 ntBASIC3.95□□□□□ -1.78
Col8a1Q00780 Gm42925-201ENSMUST00000197359 285 ntBASIC3.95□□□□□ -1.78
Col8a1Q00780 Gm44261-201ENSMUST00000203337 209 ntBASIC3.95□□□□□ -1.78
Col8a1Q00780 Gm44016-201ENSMUST00000203463 164 ntBASIC3.95□□□□□ -1.78
Col8a1Q00780 Gm3338-201ENSMUST00000220982 269 ntBASIC3.95□□□□□ -1.78
Col8a1Q00780 AC156559.1-201ENSMUST00000224158 222 ntBASIC3.95□□□□□ -1.78
Col8a1Q00780 Gm25801-201ENSMUST00000082638 106 ntBASIC3.95□□□□□ -1.78
Col8a1Q00780 Mir99a-201ENSMUST00000083596 65 ntBASIC3.95□□□□□ -1.78
Col8a1Q00780 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Col8a1Q00780 Gm38259-201ENSMUST00000194602 3534 ntBASIC3.95□□□□□ -1.78
Col8a1Q00780 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
Col8a1Q00780 Gm42876-201ENSMUST00000196989 3215 ntBASIC3.95□□□□□ -1.78
Col8a1Q00780 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Col8a1Q00780 Gm44433-201ENSMUST00000203540 4832 ntBASIC3.95□□□□□ -1.78
Col8a1Q00780 Gm43896-201ENSMUST00000203440 2032 ntBASIC3.95□□□□□ -1.78
Col8a1Q00780 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Col8a1Q00780 AC165106.3-201ENSMUST00000228191 3843 ntBASIC3.95□□□□□ -1.78
Col8a1Q00780 Gm43668-201ENSMUST00000197014 5342 ntBASIC3.95□□□□□ -1.78
Col8a1Q00780 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
Col8a1Q00780 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Col8a1Q00780 Gm21037-201ENSMUST00000209086 2608 ntBASIC3.94□□□□□ -1.78
Col8a1Q00780 Gm45324-201ENSMUST00000211193 5638 ntBASIC3.94□□□□□ -1.78
Col8a1Q00780 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Col8a1Q00780 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
Col8a1Q00780 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Col8a1Q00780 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Col8a1Q00780 Gm14142-201ENSMUST00000117833 296 ntBASIC3.94□□□□□ -1.78
Col8a1Q00780 Gm13787-201ENSMUST00000120422 168 ntBASIC3.94□□□□□ -1.78
Col8a1Q00780 Gm14577-201ENSMUST00000121134 256 ntBASIC3.94□□□□□ -1.78
Col8a1Q00780 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Col8a1Q00780 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC3.94□□□□□ -1.78
Col8a1Q00780 Gm28305-201ENSMUST00000147249 365 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
Col8a1Q00780 Gm24998-201ENSMUST00000157908 89 ntBASIC3.94□□□□□ -1.78
Col8a1Q00780 Gm24501-201ENSMUST00000158452 62 ntBASIC3.94□□□□□ -1.78
Col8a1Q00780 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Col8a1Q00780 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC3.94□□□□□ -1.78
Col8a1Q00780 Gm25999-201ENSMUST00000175398 133 ntBASIC3.94□□□□□ -1.78
Col8a1Q00780 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Col8a1Q00780 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Col8a1Q00780 Gm7656-201ENSMUST00000182468 1004 ntBASIC3.94□□□□□ -1.78
Col8a1Q00780 Gm29227-201ENSMUST00000187139 315 ntBASIC3.94□□□□□ -1.78
Col8a1Q00780 Gm29034-201ENSMUST00000188099 315 ntBASIC3.94□□□□□ -1.78
Col8a1Q00780 Gm28860-201ENSMUST00000188103 313 ntBASIC3.94□□□□□ -1.78
Col8a1Q00780 Gm5368-201ENSMUST00000189012 589 ntBASIC3.94□□□□□ -1.78
Col8a1Q00780 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC3.94□□□□□ -1.78
Col8a1Q00780 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC3.94□□□□□ -1.78
Col8a1Q00780 Gm37129-201ENSMUST00000195791 315 ntBASIC3.94□□□□□ -1.78
Col8a1Q00780 Gm42694-201ENSMUST00000196951 358 ntBASIC3.94□□□□□ -1.78
Col8a1Q00780 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC3.94□□□□□ -1.78
Col8a1Q00780 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC3.94□□□□□ -1.78
Col8a1Q00780 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.94□□□□□ -1.78
Col8a1Q00780 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC3.94□□□□□ -1.78
Col8a1Q00780 Gm45710-201ENSMUST00000212847 215 ntBASIC3.94□□□□□ -1.78
Col8a1Q00780 Gm19790-201ENSMUST00000214414 251 ntBASIC3.94□□□□□ -1.78
Col8a1Q00780 AC159203.2-201ENSMUST00000221326 193 ntBASIC3.94□□□□□ -1.78
Col8a1Q00780 AC129541.1-201ENSMUST00000226940 523 ntBASIC3.94□□□□□ -1.78
Col8a1Q00780 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Col8a1Q00780 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC3.94□□□□□ -1.78
Col8a1Q00780 Gm22571-201ENSMUST00000082984 70 ntBASIC3.94□□□□□ -1.78
Col8a1Q00780 Gm25140-201ENSMUST00000083254 140 ntBASIC3.94□□□□□ -1.78
Col8a1Q00780 Mir383-201ENSMUST00000083523 70 ntBASIC3.94□□□□□ -1.78
Col8a1Q00780 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
Col8a1Q00780 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Col8a1Q00780 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Col8a1Q00780 Gm37558-201ENSMUST00000193684 2983 ntBASIC3.94□□□□□ -1.78
Col8a1Q00780 AC112274.1-201ENSMUST00000218957 4274 ntBASIC3.94□□□□□ -1.78
Col8a1Q00780 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
Col8a1Q00780 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
Col8a1Q00780 Gm14806-201ENSMUST00000116606 2110 ntBASIC3.94□□□□□ -1.78
Col8a1Q00780 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
Col8a1Q00780 Gm37887-201ENSMUST00000192752 2716 ntBASIC3.93□□□□□ -1.78
Col8a1Q00780 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Col8a1Q00780 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Col8a1Q00780 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
Col8a1Q00780 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Col8a1Q00780 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 104.2 ms