Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Gm19074-201ENSMUST00000218915 1429 ntBASIC2.59□□□□□ -1.99
Shox2P70390 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.59□□□□□ -1.99
Shox2P70390 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Shox2P70390 Gm20756-201ENSMUST00000201080 1595 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Shox2P70390 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC2.59□□□□□ -1.99
Shox2P70390 Gm23431-201ENSMUST00000104006 107 ntBASIC2.59□□□□□ -1.99
Shox2P70390 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Shox2P70390 Gm11898-201ENSMUST00000117161 385 ntBASIC2.59□□□□□ -1.99
Shox2P70390 Gm11221-201ENSMUST00000117230 597 ntBASIC2.59□□□□□ -1.99
Shox2P70390 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC2.59□□□□□ -1.99
Shox2P70390 Gm13210-201ENSMUST00000121483 273 ntBASIC2.59□□□□□ -1.99
Shox2P70390 Gm15065-201ENSMUST00000121699 273 ntBASIC2.59□□□□□ -1.99
Shox2P70390 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Shox2P70390 Gm9785-202ENSMUST00000144563 593 ntBASIC2.59□□□□□ -1.99
Shox2P70390 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Shox2P70390 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Shox2P70390 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Shox2P70390 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC2.59□□□□□ -1.99
Shox2P70390 Gm23053-201ENSMUST00000175136 96 ntBASIC2.59□□□□□ -1.99
Shox2P70390 Mir5136-201ENSMUST00000175573 76 ntBASIC2.59□□□□□ -1.99
Shox2P70390 Npn2-202ENSMUST00000189275 235 ntBASIC2.59□□□□□ -1.99
Shox2P70390 Gm42454-201ENSMUST00000196805 1181 ntBASIC2.59□□□□□ -1.99
Shox2P70390 Gm42896-201ENSMUST00000201249 1113 ntBASIC2.59□□□□□ -1.99
Shox2P70390 Gm45445-201ENSMUST00000209586 232 ntBASIC2.59□□□□□ -1.99
Shox2P70390 Gm45678-201ENSMUST00000210509 295 ntBASIC2.59□□□□□ -1.99
Shox2P70390 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Shox2P70390 Gm18892-201ENSMUST00000217628 881 ntBASIC2.59□□□□□ -1.99
Shox2P70390 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC2.59□□□□□ -1.99
Shox2P70390 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
Shox2P70390 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC2.59□□□□□ -1.99
Shox2P70390 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Shox2P70390 Gm26129-201ENSMUST00000082719 107 ntBASIC2.59□□□□□ -1.99
Shox2P70390 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -2
Shox2P70390 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Shox2P70390 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Shox2P70390 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Shox2P70390 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC2.58□□□□□ -2
Shox2P70390 Gm12213-201ENSMUST00000119924 353 ntBASIC2.58□□□□□ -2
Shox2P70390 Gm13676-201ENSMUST00000122185 591 ntBASIC2.58□□□□□ -2
Shox2P70390 Gm14126-201ENSMUST00000122345 395 ntBASIC2.58□□□□□ -2
Shox2P70390 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC2.58□□□□□ -2
Shox2P70390 Gm25902-201ENSMUST00000158493 318 ntBASIC2.58□□□□□ -2
Shox2P70390 Gm3370-201ENSMUST00000171785 500 ntBASIC2.58□□□□□ -2
Shox2P70390 Gm26692-201ENSMUST00000180428 688 ntTSL 1 (best) BASIC2.58□□□□□ -2
Shox2P70390 Mir7242-201ENSMUST00000183710 79 ntBASIC2.58□□□□□ -2
Shox2P70390 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC2.58□□□□□ -2
Shox2P70390 Gm37751-201ENSMUST00000192440 1198 ntBASIC2.58□□□□□ -2
Shox2P70390 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC2.58□□□□□ -2
Shox2P70390 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC2.58□□□□□ -2
Shox2P70390 Gm44404-201ENSMUST00000203979 636 ntBASIC2.58□□□□□ -2
Shox2P70390 Gm43932-201ENSMUST00000204499 52 ntBASIC2.58□□□□□ -2
Shox2P70390 Gm18855-201ENSMUST00000206689 570 ntBASIC2.58□□□□□ -2
Shox2P70390 Gm44964-201ENSMUST00000207011 273 ntBASIC2.58□□□□□ -2
Shox2P70390 Gm45427-201ENSMUST00000209572 1253 ntBASIC2.58□□□□□ -2
Shox2P70390 AC153506.2-201ENSMUST00000218051 257 ntBASIC2.58□□□□□ -2
Shox2P70390 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC2.58□□□□□ -2
Shox2P70390 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.58□□□□□ -2
Shox2P70390 AC159242.1-201ENSMUST00000225832 194 ntBASIC2.58□□□□□ -2
Shox2P70390 AC161572.1-201ENSMUST00000227486 640 ntBASIC2.58□□□□□ -2
Shox2P70390 AC147628.1-201ENSMUST00000228193 688 ntBASIC2.58□□□□□ -2
Shox2P70390 Olfr1201-201ENSMUST00000073458 924 ntAPPRIS P1 BASIC2.58□□□□□ -2
Shox2P70390 Gm42659-201ENSMUST00000196955 1754 ntBASIC2.58□□□□□ -2
Shox2P70390 Gm38211-201ENSMUST00000192814 7217 ntBASIC2.58□□□□□ -2
Shox2P70390 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC2.58□□□□□ -2
Shox2P70390 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
Shox2P70390 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Shox2P70390 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Shox2P70390 Mir878-201ENSMUST00000104680 78 ntBASIC2.57□□□□□ -2
Shox2P70390 Med21-203ENSMUST00000111650 572 ntTSL 2 BASIC2.57□□□□□ -2
Shox2P70390 Gm13913-201ENSMUST00000121126 260 ntBASIC2.57□□□□□ -2
Shox2P70390 Gm14162-201ENSMUST00000121985 601 ntBASIC2.57□□□□□ -2
Shox2P70390 Gm12819-201ENSMUST00000122223 629 ntBASIC2.57□□□□□ -2
Shox2P70390 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC2.57□□□□□ -2
Shox2P70390 Gm15870-201ENSMUST00000132657 644 ntTSL 3 BASIC2.57□□□□□ -2
Shox2P70390 Gm22885-201ENSMUST00000157410 107 ntBASIC2.57□□□□□ -2
Shox2P70390 Gm22947-201ENSMUST00000158559 91 ntBASIC2.57□□□□□ -2
Shox2P70390 Mir1927-201ENSMUST00000158579 109 ntBASIC2.57□□□□□ -2
Shox2P70390 Mir3965-201ENSMUST00000175570 69 ntBASIC2.57□□□□□ -2
Shox2P70390 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC2.57□□□□□ -2
Shox2P70390 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
Shox2P70390 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC2.57□□□□□ -2
Shox2P70390 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC2.57□□□□□ -2
Shox2P70390 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC2.57□□□□□ -2
Shox2P70390 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC2.57□□□□□ -2
Shox2P70390 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC2.57□□□□□ -2
Shox2P70390 Gm37523-201ENSMUST00000194901 412 ntBASIC2.57□□□□□ -2
Shox2P70390 AC093926.1-201ENSMUST00000213730 243 ntBASIC2.57□□□□□ -2
Shox2P70390 AC167977.1-201ENSMUST00000221384 234 ntBASIC2.57□□□□□ -2
Shox2P70390 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC2.57□□□□□ -2
Shox2P70390 Gm9370-201ENSMUST00000222787 609 ntBASIC2.57□□□□□ -2
Shox2P70390 AC166830.1-201ENSMUST00000224201 533 ntBASIC2.57□□□□□ -2
Shox2P70390 AC113031.2-201ENSMUST00000226132 579 ntBASIC2.57□□□□□ -2
Shox2P70390 AC129541.1-201ENSMUST00000226940 523 ntBASIC2.57□□□□□ -2
Shox2P70390 Gm22043-201ENSMUST00000082993 158 ntBASIC2.57□□□□□ -2
Shox2P70390 Gm22293-201ENSMUST00000083314 109 ntBASIC2.57□□□□□ -2
Shox2P70390 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.57□□□□□ -2
Shox2P70390 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.57□□□□□ -2
Shox2P70390 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Shox2P70390 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC2.57□□□□□ -2
Shox2P70390 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms