Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm43784-201ENSMUST00000202922 2436 ntBASIC4.23□□□□□ -1.73
Sf3b6P59708 Mmp1b-201ENSMUST00000047888 1449 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Sf3b6P59708 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
Sf3b6P59708 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Sf3b6P59708 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Sf3b6P59708 Gm13725-201ENSMUST00000122139 207 ntBASIC4.23□□□□□ -1.73
Sf3b6P59708 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC4.23□□□□□ -1.73
Sf3b6P59708 Gm13092-201ENSMUST00000136346 260 ntBASIC4.23□□□□□ -1.73
Sf3b6P59708 Gm14298-201ENSMUST00000139032 237 ntBASIC4.23□□□□□ -1.73
Sf3b6P59708 Gm16356-201ENSMUST00000143300 169 ntBASIC4.23□□□□□ -1.73
Sf3b6P59708 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC4.23□□□□□ -1.73
Sf3b6P59708 Gm24858-201ENSMUST00000158058 323 ntBASIC4.23□□□□□ -1.73
Sf3b6P59708 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC4.23□□□□□ -1.73
Sf3b6P59708 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC4.23□□□□□ -1.73
Sf3b6P59708 Gm29147-201ENSMUST00000186846 315 ntBASIC4.23□□□□□ -1.73
Sf3b6P59708 Gm29227-201ENSMUST00000187139 315 ntBASIC4.23□□□□□ -1.73
Sf3b6P59708 Gm29034-201ENSMUST00000188099 315 ntBASIC4.23□□□□□ -1.73
Sf3b6P59708 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Sf3b6P59708 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Sf3b6P59708 Gm28160-201ENSMUST00000191229 315 ntBASIC4.23□□□□□ -1.73
Sf3b6P59708 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC4.23□□□□□ -1.73
Sf3b6P59708 Gm37129-201ENSMUST00000195791 315 ntBASIC4.23□□□□□ -1.73
Sf3b6P59708 Gm2522-201ENSMUST00000204280 322 ntBASIC4.23□□□□□ -1.73
Sf3b6P59708 Gm17811-201ENSMUST00000206193 387 ntBASIC4.23□□□□□ -1.73
Sf3b6P59708 Gm19256-201ENSMUST00000218550 231 ntBASIC4.23□□□□□ -1.73
Sf3b6P59708 AC138401.1-201ENSMUST00000221533 116 ntBASIC4.23□□□□□ -1.73
Sf3b6P59708 Gm46389-201ENSMUST00000223199 392 ntBASIC4.23□□□□□ -1.73
Sf3b6P59708 AC126440.1-201ENSMUST00000227098 349 ntBASIC4.23□□□□□ -1.73
Sf3b6P59708 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Sf3b6P59708 Mir31-201ENSMUST00000083474 106 ntBASIC4.23□□□□□ -1.73
Sf3b6P59708 Gm38101-201ENSMUST00000193484 3557 ntBASIC4.23□□□□□ -1.73
Sf3b6P59708 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Sf3b6P59708 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Sf3b6P59708 Gm3584-201ENSMUST00000173822 2565 ntBASIC4.23□□□□□ -1.73
Sf3b6P59708 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Sf3b6P59708 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
Sf3b6P59708 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Sf3b6P59708 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Sf3b6P59708 Slc22a27-201ENSMUST00000075619 2152 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Sf3b6P59708 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Sf3b6P59708 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Sf3b6P59708 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Sf3b6P59708 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
Sf3b6P59708 Gm42583-201ENSMUST00000202678 6700 ntBASIC4.22□□□□□ -1.73
Sf3b6P59708 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Sf3b6P59708 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Sf3b6P59708 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
Sf3b6P59708 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Sf3b6P59708 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Sf3b6P59708 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
Sf3b6P59708 Gm37916-201ENSMUST00000192153 2435 ntBASIC4.22□□□□□ -1.73
Sf3b6P59708 Ktn1-215ENSMUST00000189101 3761 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
Sf3b6P59708 Ccr2-201ENSMUST00000055918 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Sf3b6P59708 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
Sf3b6P59708 Gm37868-201ENSMUST00000195578 2735 ntBASIC4.22□□□□□ -1.73
Sf3b6P59708 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Sf3b6P59708 Gm11693-201ENSMUST00000119625 565 ntBASIC4.22□□□□□ -1.73
Sf3b6P59708 Gm11785-201ENSMUST00000120165 601 ntBASIC4.22□□□□□ -1.73
Sf3b6P59708 Gm12893-201ENSMUST00000121732 275 ntBASIC4.22□□□□□ -1.73
Sf3b6P59708 Gm26347-201ENSMUST00000157526 131 ntBASIC4.22□□□□□ -1.73
Sf3b6P59708 Gm22219-201ENSMUST00000157562 319 ntBASIC4.22□□□□□ -1.73
Sf3b6P59708 Gm22098-201ENSMUST00000157930 85 ntBASIC4.22□□□□□ -1.73
Sf3b6P59708 Gm27510-201ENSMUST00000158214 64 ntBASIC4.22□□□□□ -1.73
Sf3b6P59708 Gm25447-201ENSMUST00000158997 128 ntBASIC4.22□□□□□ -1.73
Sf3b6P59708 Mir7012-201ENSMUST00000183900 64 ntBASIC4.22□□□□□ -1.73
Sf3b6P59708 Gm27521-201ENSMUST00000184022 64 ntBASIC4.22□□□□□ -1.73
Sf3b6P59708 Mir6481-201ENSMUST00000184617 110 ntBASIC4.22□□□□□ -1.73
Sf3b6P59708 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC4.22□□□□□ -1.73
Sf3b6P59708 Gm20257-202ENSMUST00000188643 130 ntBASIC4.22□□□□□ -1.73
Sf3b6P59708 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Sf3b6P59708 Gm43284-201ENSMUST00000200103 253 ntBASIC4.22□□□□□ -1.73
Sf3b6P59708 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC4.22□□□□□ -1.73
Sf3b6P59708 Gm44776-201ENSMUST00000207212 381 ntBASIC4.22□□□□□ -1.73
Sf3b6P59708 Gm45403-201ENSMUST00000209453 276 ntBASIC4.22□□□□□ -1.73
Sf3b6P59708 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC4.22□□□□□ -1.73
Sf3b6P59708 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Sf3b6P59708 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC4.22□□□□□ -1.73
Sf3b6P59708 AC130821.1-201ENSMUST00000221997 293 ntBASIC4.22□□□□□ -1.73
Sf3b6P59708 AC166358.4-201ENSMUST00000223030 105 ntBASIC4.22□□□□□ -1.73
Sf3b6P59708 Gm25401-201ENSMUST00000082975 106 ntBASIC4.22□□□□□ -1.73
Sf3b6P59708 Mir10a-201ENSMUST00000083585 110 ntBASIC4.22□□□□□ -1.73
Sf3b6P59708 Gm25187-201ENSMUST00000083906 133 ntBASIC4.22□□□□□ -1.73
Sf3b6P59708 Olfr1286-202ENSMUST00000184954 3398 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
Sf3b6P59708 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Sf3b6P59708 Gm43047-201ENSMUST00000200089 3460 ntBASIC4.22□□□□□ -1.73
Sf3b6P59708 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Sf3b6P59708 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Sf3b6P59708 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC4.22□□□□□ -1.73
Sf3b6P59708 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Sf3b6P59708 Gm37174-201ENSMUST00000194699 3058 ntBASIC4.22□□□□□ -1.73
Sf3b6P59708 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Sf3b6P59708 Gm36969-201ENSMUST00000194551 2809 ntBASIC4.22□□□□□ -1.73
Sf3b6P59708 Gm43200-201ENSMUST00000200385 2161 ntBASIC4.21□□□□□ -1.73
Sf3b6P59708 Hm629797-201ENSMUST00000183645 2398 ntBASIC4.21□□□□□ -1.73
Sf3b6P59708 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
Sf3b6P59708 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
Sf3b6P59708 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
Sf3b6P59708 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Sf3b6P59708 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
Sf3b6P59708 Gm22496-201ENSMUST00000104493 88 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 119.1 ms