Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Mir7226-201ENSMUST00000184953 60 ntBASIC2.33□□□□□ -2.04
Cdx2P43241 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC2.33□□□□□ -2.04
Cdx2P43241 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Cdx2P43241 Gm37377-201ENSMUST00000191733 304 ntBASIC2.33□□□□□ -2.04
Cdx2P43241 Gm37989-201ENSMUST00000195202 803 ntBASIC2.33□□□□□ -2.04
Cdx2P43241 Gm37817-201ENSMUST00000195276 434 ntBASIC2.33□□□□□ -2.04
Cdx2P43241 Mir497-201ENSMUST00000200557 84 ntBASIC2.33□□□□□ -2.04
Cdx2P43241 Gm43295-201ENSMUST00000201439 412 ntBASIC2.33□□□□□ -2.04
Cdx2P43241 Gm43967-201ENSMUST00000203787 301 ntBASIC2.33□□□□□ -2.04
Cdx2P43241 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Cdx2P43241 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC2.33□□□□□ -2.04
Cdx2P43241 Gm45273-201ENSMUST00000211559 281 ntBASIC2.33□□□□□ -2.04
Cdx2P43241 Gm18000-201ENSMUST00000212153 800 ntBASIC2.33□□□□□ -2.04
Cdx2P43241 Gm18043-201ENSMUST00000216741 739 ntBASIC2.33□□□□□ -2.04
Cdx2P43241 AC155167.3-201ENSMUST00000226349 217 ntBASIC2.33□□□□□ -2.04
Cdx2P43241 Gm23447-201ENSMUST00000082798 163 ntBASIC2.33□□□□□ -2.04
Cdx2P43241 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Cdx2P43241 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.33□□□□□ -2.04
Cdx2P43241 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC2.33□□□□□ -2.04
Cdx2P43241 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
Cdx2P43241 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.32□□□□□ -2.04
Cdx2P43241 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC2.32□□□□□ -2.04
Cdx2P43241 Gm16383-201ENSMUST00000118122 232 ntBASIC2.32□□□□□ -2.04
Cdx2P43241 Gm14469-201ENSMUST00000118363 202 ntBASIC2.32□□□□□ -2.04
Cdx2P43241 Gm12803-201ENSMUST00000118907 821 ntBASIC2.32□□□□□ -2.04
Cdx2P43241 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Cdx2P43241 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC2.32□□□□□ -2.04
Cdx2P43241 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC2.32□□□□□ -2.04
Cdx2P43241 4930577H14Rik-201ENSMUST00000151367 790 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Cdx2P43241 Gm24212-201ENSMUST00000158258 132 ntBASIC2.32□□□□□ -2.04
Cdx2P43241 Gm22521-201ENSMUST00000158272 134 ntBASIC2.32□□□□□ -2.04
Cdx2P43241 Gm37946-201ENSMUST00000192064 347 ntBASIC2.32□□□□□ -2.04
Cdx2P43241 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC2.32□□□□□ -2.04
Cdx2P43241 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.32□□□□□ -2.04
Cdx2P43241 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Cdx2P43241 AC158622.1-201ENSMUST00000217107 230 ntBASIC2.32□□□□□ -2.04
Cdx2P43241 AC159472.1-201ENSMUST00000218178 463 ntBASIC2.32□□□□□ -2.04
Cdx2P43241 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Cdx2P43241 AC154600.1-201ENSMUST00000226480 714 ntBASIC2.32□□□□□ -2.04
Cdx2P43241 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Cdx2P43241 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Cdx2P43241 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC2.32□□□□□ -2.04
Cdx2P43241 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
Cdx2P43241 Mir322-201ENSMUST00000083484 95 ntBASIC2.32□□□□□ -2.04
Cdx2P43241 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Cdx2P43241 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Cdx2P43241 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Cdx2P43241 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.32□□□□□ -2.04
Cdx2P43241 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Cdx2P43241 Tlr7-201ENSMUST00000060719 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Cdx2P43241 AC115891.1-201ENSMUST00000215798 1755 ntBASIC2.31□□□□□ -2.04
Cdx2P43241 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Cdx2P43241 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.31□□□□□ -2.04
Cdx2P43241 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC2.31□□□□□ -2.04
Cdx2P43241 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC2.31□□□□□ -2.04
Cdx2P43241 Gm24475-201ENSMUST00000157435 143 ntBASIC2.31□□□□□ -2.04
Cdx2P43241 Gm24736-201ENSMUST00000158862 130 ntBASIC2.31□□□□□ -2.04
Cdx2P43241 Vmn1r-ps65-201ENSMUST00000174235 951 ntBASIC2.31□□□□□ -2.04
Cdx2P43241 Gm27698-201ENSMUST00000184060 249 ntBASIC2.31□□□□□ -2.04
Cdx2P43241 Gm28744-201ENSMUST00000189939 340 ntBASIC2.31□□□□□ -2.04
Cdx2P43241 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC2.31□□□□□ -2.04
Cdx2P43241 AC102312.1-201ENSMUST00000217752 475 ntTSL 3 BASIC2.31□□□□□ -2.04
Cdx2P43241 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC2.31□□□□□ -2.04
Cdx2P43241 AC158392.1-201ENSMUST00000223720 1069 ntBASIC2.31□□□□□ -2.04
Cdx2P43241 CT009510.2-203ENSMUST00000226704 2136 ntBASIC2.31□□□□□ -2.04
Cdx2P43241 AC115878.1-201ENSMUST00000227247 334 ntBASIC2.31□□□□□ -2.04
Cdx2P43241 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Cdx2P43241 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
Cdx2P43241 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Cdx2P43241 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Cdx2P43241 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.31□□□□□ -2.04
Cdx2P43241 Gm8675-201ENSMUST00000201408 1856 ntBASIC2.31□□□□□ -2.04
Cdx2P43241 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.31□□□□□ -2.04
Cdx2P43241 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.3□□□□□ -2.04
Cdx2P43241 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Cdx2P43241 Gm7123-201ENSMUST00000117647 213 ntBASIC2.3□□□□□ -2.04
Cdx2P43241 Gm13901-201ENSMUST00000137252 468 ntBASIC2.3□□□□□ -2.04
Cdx2P43241 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC2.3□□□□□ -2.04
Cdx2P43241 Gm23600-201ENSMUST00000157260 71 ntBASIC2.3□□□□□ -2.04
Cdx2P43241 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC2.3□□□□□ -2.04
Cdx2P43241 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC2.3□□□□□ -2.04
Cdx2P43241 Gm43991-201ENSMUST00000203751 274 ntBASIC2.3□□□□□ -2.04
Cdx2P43241 Gm45252-201ENSMUST00000211579 397 ntBASIC2.3□□□□□ -2.04
Cdx2P43241 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC2.3□□□□□ -2.04
Cdx2P43241 AC126673.3-201ENSMUST00000223414 3829 ntBASIC2.3□□□□□ -2.04
Cdx2P43241 AC157772.2-201ENSMUST00000228202 259 ntBASIC2.3□□□□□ -2.04
Cdx2P43241 Olfr867-201ENSMUST00000060780 996 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Cdx2P43241 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Cdx2P43241 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Cdx2P43241 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Cdx2P43241 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Cdx2P43241 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Cdx2P43241 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
Cdx2P43241 Olfr1313-202ENSMUST00000213577 2588 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Cdx2P43241 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.29□□□□□ -2.04
Cdx2P43241 Olfr1052-202ENSMUST00000215090 1526 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Cdx2P43241 Gm12871-201ENSMUST00000118758 438 ntBASIC2.29□□□□□ -2.04
Cdx2P43241 Gm11797-201ENSMUST00000121336 754 ntBASIC2.29□□□□□ -2.04
Cdx2P43241 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
Cdx2P43241 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC2.29□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 119.8 ms