Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Olfr1325-202ENSMUST00000216007 3617 ntAPPRIS ALT2 TSL 5 BASIC3.73□□□□□ -1.81
Traf1P39428 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Traf1P39428 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.73□□□□□ -1.81
Traf1P39428 Gm597-201ENSMUST00000059937 2887 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
Traf1P39428 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Traf1P39428 Mir693-201ENSMUST00000102187 89 ntBASIC3.72□□□□□ -1.81
Traf1P39428 Gm11576-201ENSMUST00000117433 417 ntBASIC3.72□□□□□ -1.81
Traf1P39428 Gm25109-201ENSMUST00000122474 114 ntBASIC3.72□□□□□ -1.81
Traf1P39428 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC3.72□□□□□ -1.81
Traf1P39428 Gm22722-201ENSMUST00000157467 132 ntBASIC3.72□□□□□ -1.81
Traf1P39428 Gm26348-201ENSMUST00000157528 240 ntBASIC3.72□□□□□ -1.81
Traf1P39428 Gm23391-201ENSMUST00000157579 104 ntBASIC3.72□□□□□ -1.81
Traf1P39428 Gm22833-201ENSMUST00000158292 132 ntBASIC3.72□□□□□ -1.81
Traf1P39428 Gm25490-201ENSMUST00000158734 130 ntBASIC3.72□□□□□ -1.81
Traf1P39428 Gm17183-201ENSMUST00000171170 493 ntBASIC3.72□□□□□ -1.81
Traf1P39428 Vmn1r-ps34-201ENSMUST00000174046 943 ntBASIC3.72□□□□□ -1.81
Traf1P39428 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC3.72□□□□□ -1.81
Traf1P39428 Gm25874-201ENSMUST00000178030 79 ntBASIC3.72□□□□□ -1.81
Traf1P39428 Gm8649-201ENSMUST00000181799 233 ntBASIC3.72□□□□□ -1.81
Traf1P39428 Gm27676-201ENSMUST00000183669 61 ntBASIC3.72□□□□□ -1.81
Traf1P39428 Gm27648-201ENSMUST00000184315 107 ntBASIC3.72□□□□□ -1.81
Traf1P39428 Gm28956-201ENSMUST00000189047 427 ntBASIC3.72□□□□□ -1.81
Traf1P39428 Gm6651-201ENSMUST00000189471 271 ntBASIC3.72□□□□□ -1.81
Traf1P39428 Ighv1-40-201ENSMUST00000194231 345 ntBASIC3.72□□□□□ -1.81
Traf1P39428 Nras-ps2-201ENSMUST00000195269 178 ntBASIC3.72□□□□□ -1.81
Traf1P39428 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC3.72□□□□□ -1.81
Traf1P39428 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC3.72□□□□□ -1.81
Traf1P39428 AC107757.3-201ENSMUST00000226312 535 ntBASIC3.72□□□□□ -1.81
Traf1P39428 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.72□□□□□ -1.81
Traf1P39428 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
Traf1P39428 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC3.72□□□□□ -1.81
Traf1P39428 Gm23136-201ENSMUST00000083425 99 ntBASIC3.72□□□□□ -1.81
Traf1P39428 Gm22578-201ENSMUST00000083730 107 ntBASIC3.72□□□□□ -1.81
Traf1P39428 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
Traf1P39428 Olfr1222-202ENSMUST00000214027 2393 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
Traf1P39428 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
Traf1P39428 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.81
Traf1P39428 Gm20541-201ENSMUST00000173035 1406 ntBASIC3.71□□□□□ -1.82
Traf1P39428 Mir883a-201ENSMUST00000104824 76 ntBASIC3.71□□□□□ -1.82
Traf1P39428 Gm6923-201ENSMUST00000118343 406 ntBASIC3.71□□□□□ -1.82
Traf1P39428 Gm12268-201ENSMUST00000118398 442 ntBASIC3.71□□□□□ -1.82
Traf1P39428 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC3.71□□□□□ -1.82
Traf1P39428 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Traf1P39428 Gm22766-201ENSMUST00000158372 99 ntBASIC3.71□□□□□ -1.82
Traf1P39428 Gm19224-201ENSMUST00000190477 793 ntBASIC3.71□□□□□ -1.82
Traf1P39428 Gm7751-201ENSMUST00000212868 709 ntBASIC3.71□□□□□ -1.82
Traf1P39428 Gm19987-201ENSMUST00000216339 499 ntBASIC3.71□□□□□ -1.82
Traf1P39428 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC3.71□□□□□ -1.82
Traf1P39428 CT030135.1-201ENSMUST00000223760 570 ntBASIC3.71□□□□□ -1.82
Traf1P39428 AC098719.1-201ENSMUST00000228920 371 ntBASIC3.71□□□□□ -1.82
Traf1P39428 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Traf1P39428 Gm23932-201ENSMUST00000082914 107 ntBASIC3.71□□□□□ -1.82
Traf1P39428 Mir128-1-201ENSMUST00000083586 70 ntBASIC3.71□□□□□ -1.82
Traf1P39428 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
Traf1P39428 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Traf1P39428 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Traf1P39428 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.7□□□□□ -1.82
Traf1P39428 Gm14981-201ENSMUST00000117325 943 ntBASIC3.7□□□□□ -1.82
Traf1P39428 Gm12636-201ENSMUST00000117395 624 ntBASIC3.7□□□□□ -1.82
Traf1P39428 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC3.7□□□□□ -1.82
Traf1P39428 Gm11219-201ENSMUST00000118565 358 ntBASIC3.7□□□□□ -1.82
Traf1P39428 Gm8840-201ENSMUST00000122454 386 ntBASIC3.7□□□□□ -1.82
Traf1P39428 Gm15555-201ENSMUST00000128832 713 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Traf1P39428 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Traf1P39428 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Traf1P39428 Gm25066-201ENSMUST00000158145 123 ntBASIC3.7□□□□□ -1.82
Traf1P39428 Fth-ps2-201ENSMUST00000168364 516 ntBASIC3.7□□□□□ -1.82
Traf1P39428 Mir5136-201ENSMUST00000175573 76 ntBASIC3.7□□□□□ -1.82
Traf1P39428 Gm20612-201ENSMUST00000176318 236 ntBASIC3.7□□□□□ -1.82
Traf1P39428 Gm25873-201ENSMUST00000180317 107 ntBASIC3.7□□□□□ -1.82
Traf1P39428 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.7□□□□□ -1.82
Traf1P39428 Gm37438-201ENSMUST00000192813 393 ntBASIC3.7□□□□□ -1.82
Traf1P39428 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC3.7□□□□□ -1.82
Traf1P39428 Gm19457-201ENSMUST00000200995 448 ntBASIC3.7□□□□□ -1.82
Traf1P39428 Gm44425-201ENSMUST00000203739 429 ntBASIC3.7□□□□□ -1.82
Traf1P39428 Gm35931-201ENSMUST00000203931 448 ntBASIC3.7□□□□□ -1.82
Traf1P39428 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.7□□□□□ -1.82
Traf1P39428 Gm18015-201ENSMUST00000214879 316 ntBASIC3.7□□□□□ -1.82
Traf1P39428 AC127302.1-201ENSMUST00000215973 1111 ntBASIC3.7□□□□□ -1.82
Traf1P39428 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC3.7□□□□□ -1.82
Traf1P39428 AC124729.1-202ENSMUST00000225587 938 ntBASIC3.7□□□□□ -1.82
Traf1P39428 AC161758.1-201ENSMUST00000226123 310 ntBASIC3.7□□□□□ -1.82
Traf1P39428 AC118639.1-204ENSMUST00000226401 694 ntBASIC3.7□□□□□ -1.82
Traf1P39428 AC147628.1-201ENSMUST00000228193 688 ntBASIC3.7□□□□□ -1.82
Traf1P39428 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Traf1P39428 Gm22979-201ENSMUST00000082609 159 ntBASIC3.7□□□□□ -1.82
Traf1P39428 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Traf1P39428 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Traf1P39428 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Traf1P39428 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.7□□□□□ -1.82
Traf1P39428 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Traf1P39428 Gm4211-201ENSMUST00000181103 2220 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Traf1P39428 Olfr25-203ENSMUST00000214155 6479 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
Traf1P39428 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.7□□□□□ -1.82
Traf1P39428 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Traf1P39428 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Traf1P39428 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.69□□□□□ -1.82
Traf1P39428 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
Traf1P39428 Gm14387-201ENSMUST00000121827 2055 ntBASIC3.69□□□□□ -1.82
Traf1P39428 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms