Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Msx1P13297 Gm42923-201ENSMUST00000198438 2896 ntBASIC5.11□□□□□ -1.59
Msx1P13297 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Msx1P13297 Ino80d-205ENSMUST00000165066 13529 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Msx1P13297 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC5.11□□□□□ -1.59
Msx1P13297 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Msx1P13297 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Msx1P13297 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Msx1P13297 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Msx1P13297 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Msx1P13297 Olfr1115-204ENSMUST00000217196 2109 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
Msx1P13297 Olfr642-202ENSMUST00000214299 4715 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Msx1P13297 Gm14569-204ENSMUST00000169499 5181 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Msx1P13297 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
Msx1P13297 Gm37051-201ENSMUST00000194535 2943 ntBASIC5.1□□□□□ -1.59
Msx1P13297 Gm43887-201ENSMUST00000204727 3186 ntBASIC5.1□□□□□ -1.59
Msx1P13297 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Msx1P13297 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Msx1P13297 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Msx1P13297 Gm14894-201ENSMUST00000117170 270 ntBASIC5.1□□□□□ -1.59
Msx1P13297 Gm13210-201ENSMUST00000121483 273 ntBASIC5.1□□□□□ -1.59
Msx1P13297 Gm15065-201ENSMUST00000121699 273 ntBASIC5.1□□□□□ -1.59
Msx1P13297 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Msx1P13297 Gm25115-201ENSMUST00000157187 140 ntBASIC5.1□□□□□ -1.59
Msx1P13297 Gm25430-201ENSMUST00000157614 289 ntBASIC5.1□□□□□ -1.59
Msx1P13297 Gm22767-201ENSMUST00000158365 165 ntBASIC5.1□□□□□ -1.59
Msx1P13297 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Msx1P13297 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Msx1P13297 Gm27820-201ENSMUST00000183628 175 ntBASIC5.1□□□□□ -1.59
Msx1P13297 Gm37449-201ENSMUST00000193016 270 ntBASIC5.1□□□□□ -1.59
Msx1P13297 Gm18658-201ENSMUST00000195558 270 ntBASIC5.1□□□□□ -1.59
Msx1P13297 Gm43857-201ENSMUST00000200343 3079 ntBASIC5.1□□□□□ -1.59
Msx1P13297 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Msx1P13297 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Msx1P13297 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC5.1□□□□□ -1.59
Msx1P13297 Zfp606-205ENSMUST00000209403 2211 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Msx1P13297 AC159619.1-201ENSMUST00000219118 318 ntTSL 5 BASIC5.1□□□□□ -1.59
Msx1P13297 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC5.1□□□□□ -1.59
Msx1P13297 Satl1-201ENSMUST00000026601 2412 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Msx1P13297 Stxbp4-207ENSMUST00000143203 5985 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Msx1P13297 Gm37018-201ENSMUST00000192441 3869 ntBASIC5.09□□□□□ -1.59
Msx1P13297 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Msx1P13297 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
Msx1P13297 AA792892-201ENSMUST00000097477 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Msx1P13297 Mrc1-201ENSMUST00000028045 5374 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Msx1P13297 AC158115.2-201ENSMUST00000221804 5563 ntTSL 5 BASIC5.09□□□□□ -1.59
Msx1P13297 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Msx1P13297 Gm11699-201ENSMUST00000119016 401 ntBASIC5.09□□□□□ -1.59
Msx1P13297 Gm12110-201ENSMUST00000121601 579 ntBASIC5.09□□□□□ -1.59
Msx1P13297 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC5.09□□□□□ -1.59
Msx1P13297 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Msx1P13297 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
Msx1P13297 Gm26310-201ENSMUST00000157766 117 ntBASIC5.09□□□□□ -1.59
Msx1P13297 Gm22098-201ENSMUST00000157930 85 ntBASIC5.09□□□□□ -1.59
Msx1P13297 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Msx1P13297 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC5.09□□□□□ -1.59
Msx1P13297 Gm27541-201ENSMUST00000184078 122 ntBASIC5.09□□□□□ -1.59
Msx1P13297 2610044O15Rik8-203ENSMUST00000188757 413 ntTSL 2 BASIC5.09□□□□□ -1.59
Msx1P13297 Gm43704-201ENSMUST00000196164 496 ntBASIC5.09□□□□□ -1.59
Msx1P13297 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC5.09□□□□□ -1.59
Msx1P13297 Gm44657-201ENSMUST00000208568 450 ntBASIC5.09□□□□□ -1.59
Msx1P13297 Gm45778-201ENSMUST00000211959 153 ntBASIC5.09□□□□□ -1.59
Msx1P13297 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Msx1P13297 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC5.09□□□□□ -1.59
Msx1P13297 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
Msx1P13297 Gm23677-201ENSMUST00000083156 104 ntBASIC5.09□□□□□ -1.59
Msx1P13297 Gm37588-201ENSMUST00000195024 2496 ntBASIC5.09□□□□□ -1.59
Msx1P13297 Olfr1386-203ENSMUST00000213674 2457 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Msx1P13297 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Msx1P13297 Gm43605-201ENSMUST00000199663 3426 ntBASIC5.09□□□□□ -1.59
Msx1P13297 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Msx1P13297 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Msx1P13297 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Msx1P13297 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Msx1P13297 Xkrx-201ENSMUST00000033611 2876 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Msx1P13297 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
Msx1P13297 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Msx1P13297 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Msx1P13297 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.08□□□□□ -1.6
Msx1P13297 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Msx1P13297 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Msx1P13297 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Msx1P13297 Olfr685-204ENSMUST00000217432 3246 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
Msx1P13297 Hmgn2l6-201ENSMUST00000115986 267 ntBASIC5.08□□□□□ -1.6
Msx1P13297 Gm23651-201ENSMUST00000116755 120 ntBASIC5.08□□□□□ -1.6
Msx1P13297 Gm13873-201ENSMUST00000119208 427 ntBASIC5.08□□□□□ -1.6
Msx1P13297 Gm13435-201ENSMUST00000120111 1023 ntBASIC5.08□□□□□ -1.6
Msx1P13297 Gm12617-201ENSMUST00000121268 381 ntBASIC5.08□□□□□ -1.6
Msx1P13297 Gm24839-201ENSMUST00000122602 107 ntBASIC5.08□□□□□ -1.6
Msx1P13297 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC5.08□□□□□ -1.6
Msx1P13297 Gm24885-201ENSMUST00000158783 270 ntBASIC5.08□□□□□ -1.6
Msx1P13297 Pkib-209ENSMUST00000177325 540 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Msx1P13297 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Msx1P13297 Gm28148-201ENSMUST00000186924 697 ntBASIC5.08□□□□□ -1.6
Msx1P13297 Gm19901-201ENSMUST00000192191 495 ntBASIC5.08□□□□□ -1.6
Msx1P13297 Gm37421-201ENSMUST00000193088 132 ntBASIC5.08□□□□□ -1.6
Msx1P13297 Gm17775-201ENSMUST00000198542 258 ntBASIC5.08□□□□□ -1.6
Msx1P13297 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC5.08□□□□□ -1.6
Msx1P13297 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC5.08□□□□□ -1.6
Msx1P13297 Gm45013-201ENSMUST00000206883 178 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms