Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 AC157772.2-201ENSMUST00000228202 259 ntBASIC5.01□□□□□ -1.61
RaraP11416 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
RaraP11416 Gm26055-201ENSMUST00000083038 107 ntBASIC5.01□□□□□ -1.61
RaraP11416 Gm37397-201ENSMUST00000194579 2842 ntBASIC5.01□□□□□ -1.61
RaraP11416 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
RaraP11416 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
RaraP11416 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
RaraP11416 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
RaraP11416 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RaraP11416 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
RaraP11416 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
RaraP11416 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
RaraP11416 Gm38101-201ENSMUST00000193484 3557 ntBASIC5□□□□□ -1.61
RaraP11416 Gm45853-201ENSMUST00000212310 3171 ntBASIC5□□□□□ -1.61
RaraP11416 Gm42583-201ENSMUST00000202678 6700 ntBASIC5□□□□□ -1.61
RaraP11416 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC5□□□□□ -1.61
RaraP11416 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC5□□□□□ -1.61
RaraP11416 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RaraP11416 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RaraP11416 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC5□□□□□ -1.61
RaraP11416 Gm24124-201ENSMUST00000104103 132 ntBASIC5□□□□□ -1.61
RaraP11416 Gm26147-201ENSMUST00000104479 114 ntBASIC5□□□□□ -1.61
RaraP11416 Gm11971-201ENSMUST00000117715 288 ntBASIC5□□□□□ -1.61
RaraP11416 AA413626-201ENSMUST00000121125 494 ntBASIC5□□□□□ -1.61
RaraP11416 Gm16345-201ENSMUST00000146065 158 ntBASIC5□□□□□ -1.61
RaraP11416 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC5□□□□□ -1.61
RaraP11416 Gm27926-201ENSMUST00000157180 66 ntBASIC5□□□□□ -1.61
RaraP11416 Gm22814-201ENSMUST00000157452 104 ntBASIC5□□□□□ -1.61
RaraP11416 Gm25486-201ENSMUST00000158726 63 ntBASIC5□□□□□ -1.61
RaraP11416 Gm37682-201ENSMUST00000191776 522 ntBASIC5□□□□□ -1.61
RaraP11416 Gm38250-201ENSMUST00000192691 766 ntTSL 3 BASIC5□□□□□ -1.61
RaraP11416 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC5□□□□□ -1.61
RaraP11416 Gm43712-201ENSMUST00000198020 291 ntBASIC5□□□□□ -1.61
RaraP11416 Gm44330-201ENSMUST00000200106 143 ntBASIC5□□□□□ -1.61
RaraP11416 Gm44371-201ENSMUST00000204148 467 ntBASIC5□□□□□ -1.61
RaraP11416 Gm45772-201ENSMUST00000212961 240 ntBASIC5□□□□□ -1.61
RaraP11416 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC5□□□□□ -1.61
RaraP11416 Gm6049-201ENSMUST00000222369 458 ntBASIC5□□□□□ -1.61
RaraP11416 Gm10092-201ENSMUST00000077110 180 ntBASIC5□□□□□ -1.61
RaraP11416 Gm6065-201ENSMUST00000081336 492 ntBASIC5□□□□□ -1.61
RaraP11416 Gm37983-201ENSMUST00000193207 2006 ntBASIC5□□□□□ -1.61
RaraP11416 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
RaraP11416 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
RaraP11416 Gm14421-201ENSMUST00000121755 1958 ntBASIC5□□□□□ -1.61
RaraP11416 Gm38253-201ENSMUST00000194058 4678 ntBASIC5□□□□□ -1.61
RaraP11416 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC5□□□□□ -1.61
RaraP11416 Gm8989-201ENSMUST00000184782 7275 ntBASIC4.99□□□□□ -1.61
RaraP11416 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RaraP11416 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
RaraP11416 Klra2-201ENSMUST00000032306 1799 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
RaraP11416 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RaraP11416 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.99□□□□□ -1.61
RaraP11416 Gm43663-201ENSMUST00000198643 1505 ntBASIC4.99□□□□□ -1.61
RaraP11416 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
RaraP11416 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RaraP11416 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RaraP11416 Gm14008-201ENSMUST00000120483 274 ntBASIC4.99□□□□□ -1.61
RaraP11416 Gm14694-201ENSMUST00000121856 282 ntBASIC4.99□□□□□ -1.61
RaraP11416 Gm13345-201ENSMUST00000121928 228 ntBASIC4.99□□□□□ -1.61
RaraP11416 n-R5s192-201ENSMUST00000122577 119 ntBASIC4.99□□□□□ -1.61
RaraP11416 Gm5353-201ENSMUST00000139800 793 ntBASIC4.99□□□□□ -1.61
RaraP11416 Zakit-201ENSMUST00000157677 308 ntBASIC4.99□□□□□ -1.61
RaraP11416 Gm25447-201ENSMUST00000158997 128 ntBASIC4.99□□□□□ -1.61
RaraP11416 Gm20428-201ENSMUST00000174365 283 ntBASIC4.99□□□□□ -1.61
RaraP11416 Mir6963-201ENSMUST00000183535 71 ntBASIC4.99□□□□□ -1.61
RaraP11416 Gm27551-201ENSMUST00000184258 77 ntBASIC4.99□□□□□ -1.61
RaraP11416 Gm28385-201ENSMUST00000185671 292 ntBASIC4.99□□□□□ -1.61
RaraP11416 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RaraP11416 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC4.99□□□□□ -1.61
RaraP11416 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC4.99□□□□□ -1.61
RaraP11416 Gm34073-201ENSMUST00000195736 212 ntBASIC4.99□□□□□ -1.61
RaraP11416 Gm44391-201ENSMUST00000198490 93 ntBASIC4.99□□□□□ -1.61
RaraP11416 Gm45101-201ENSMUST00000208327 232 ntBASIC4.99□□□□□ -1.61
RaraP11416 Mir31-201ENSMUST00000083474 106 ntBASIC4.99□□□□□ -1.61
RaraP11416 Gm43260-201ENSMUST00000197378 2430 ntBASIC4.99□□□□□ -1.61
RaraP11416 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC4.99□□□□□ -1.61
RaraP11416 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RaraP11416 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
RaraP11416 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RaraP11416 Gm38259-201ENSMUST00000194602 3534 ntBASIC4.99□□□□□ -1.61
RaraP11416 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RaraP11416 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
RaraP11416 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
RaraP11416 Gm13477-201ENSMUST00000121620 2687 ntBASIC4.99□□□□□ -1.61
RaraP11416 Gm42876-201ENSMUST00000196989 3215 ntBASIC4.99□□□□□ -1.61
RaraP11416 Gm5347-201ENSMUST00000210542 2327 ntBASIC4.98□□□□□ -1.61
RaraP11416 Vmn1r202-202ENSMUST00000228020 5441 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
RaraP11416 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
RaraP11416 Gm37718-201ENSMUST00000191655 2631 ntBASIC4.98□□□□□ -1.61
RaraP11416 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
RaraP11416 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RaraP11416 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
RaraP11416 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
RaraP11416 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
RaraP11416 Gm5938-201ENSMUST00000114030 775 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RaraP11416 Gm13329-201ENSMUST00000117063 265 ntBASIC4.98□□□□□ -1.61
RaraP11416 Gm12512-201ENSMUST00000119620 217 ntBASIC4.98□□□□□ -1.61
RaraP11416 Gm26373-201ENSMUST00000157833 103 ntBASIC4.98□□□□□ -1.61
RaraP11416 Gm26041-201ENSMUST00000158148 108 ntBASIC4.98□□□□□ -1.61
RaraP11416 Gm22433-201ENSMUST00000158550 142 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms