Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Lire1P11260 Gm13406-201ENSMUST00000121991 256 ntBASIC3.3□□□□□ -1.88
Lire1P11260 Gm23667-201ENSMUST00000157466 120 ntBASIC3.3□□□□□ -1.88
Lire1P11260 Gm6788-201ENSMUST00000166459 270 ntBASIC3.3□□□□□ -1.88
Lire1P11260 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Lire1P11260 Vmn2r-ps73-201ENSMUST00000173890 1194 ntBASIC3.3□□□□□ -1.88
Lire1P11260 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC3.3□□□□□ -1.88
Lire1P11260 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC3.3□□□□□ -1.88
Lire1P11260 Gm37617-201ENSMUST00000194309 159 ntBASIC3.3□□□□□ -1.88
Lire1P11260 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC3.3□□□□□ -1.88
Lire1P11260 Gm15235-201ENSMUST00000200572 194 ntBASIC3.3□□□□□ -1.88
Lire1P11260 Gm19649-201ENSMUST00000201126 822 ntBASIC3.3□□□□□ -1.88
Lire1P11260 Gm45048-201ENSMUST00000207058 429 ntBASIC3.3□□□□□ -1.88
Lire1P11260 Gm45439-201ENSMUST00000211723 359 ntBASIC3.3□□□□□ -1.88
Lire1P11260 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.3□□□□□ -1.88
Lire1P11260 Gm3333-202ENSMUST00000221763 1044 ntBASIC3.3□□□□□ -1.88
Lire1P11260 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Lire1P11260 AC118639.1-201ENSMUST00000227204 338 ntBASIC3.3□□□□□ -1.88
Lire1P11260 Gm4945-201ENSMUST00000075152 453 ntBASIC3.3□□□□□ -1.88
Lire1P11260 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Lire1P11260 Gm25480-201ENSMUST00000083217 133 ntBASIC3.3□□□□□ -1.88
Lire1P11260 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
Lire1P11260 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Lire1P11260 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Lire1P11260 AC154511.1-201ENSMUST00000222578 1587 ntBASIC3.29□□□□□ -1.88
Lire1P11260 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Lire1P11260 Gm7869-201ENSMUST00000121457 1322 ntBASIC3.29□□□□□ -1.88
Lire1P11260 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Lire1P11260 Gm12873-201ENSMUST00000119988 422 ntBASIC3.29□□□□□ -1.88
Lire1P11260 Vmn2r-ps76-201ENSMUST00000173876 739 ntBASIC3.29□□□□□ -1.88
Lire1P11260 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Lire1P11260 Gm29600-201ENSMUST00000188687 377 ntBASIC3.29□□□□□ -1.88
Lire1P11260 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Lire1P11260 Gm43217-201ENSMUST00000199513 367 ntBASIC3.29□□□□□ -1.88
Lire1P11260 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Lire1P11260 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC3.29□□□□□ -1.88
Lire1P11260 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC3.29□□□□□ -1.88
Lire1P11260 AC124489.2-201ENSMUST00000223930 589 ntBASIC3.29□□□□□ -1.88
Lire1P11260 Tmsb15a-201ENSMUST00000073674 299 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Lire1P11260 Mir208a-201ENSMUST00000083498 83 ntBASIC3.29□□□□□ -1.88
Lire1P11260 Snord15a-201ENSMUST00000083888 148 ntBASIC3.29□□□□□ -1.88
Lire1P11260 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Lire1P11260 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Lire1P11260 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Lire1P11260 Gm44049-201ENSMUST00000204905 2984 ntBASIC3.28□□□□□ -1.88
Lire1P11260 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
Lire1P11260 Zfp260-202ENSMUST00000108200 3604 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Lire1P11260 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Lire1P11260 Gm11384-201ENSMUST00000121376 303 ntBASIC3.28□□□□□ -1.88
Lire1P11260 Gm14101-201ENSMUST00000121502 473 ntBASIC3.28□□□□□ -1.88
Lire1P11260 Gm13555-201ENSMUST00000121668 319 ntBASIC3.28□□□□□ -1.88
Lire1P11260 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC3.28□□□□□ -1.88
Lire1P11260 Gm25621-201ENSMUST00000157223 114 ntBASIC3.28□□□□□ -1.88
Lire1P11260 Gm22310-201ENSMUST00000157509 116 ntBASIC3.28□□□□□ -1.88
Lire1P11260 Gm25637-201ENSMUST00000157529 107 ntBASIC3.28□□□□□ -1.88
Lire1P11260 Gm23755-201ENSMUST00000157578 343 ntBASIC3.28□□□□□ -1.88
Lire1P11260 Gm23380-201ENSMUST00000158448 103 ntBASIC3.28□□□□□ -1.88
Lire1P11260 Gm23819-201ENSMUST00000158744 109 ntBASIC3.28□□□□□ -1.88
Lire1P11260 Gm25835-201ENSMUST00000158917 144 ntBASIC3.28□□□□□ -1.88
Lire1P11260 Gm15946-201ENSMUST00000160654 423 ntBASIC3.28□□□□□ -1.88
Lire1P11260 Gm17162-201ENSMUST00000168538 473 ntBASIC3.28□□□□□ -1.88
Lire1P11260 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC3.28□□□□□ -1.88
Lire1P11260 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Lire1P11260 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Lire1P11260 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Lire1P11260 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.28□□□□□ -1.88
Lire1P11260 Gm44355-201ENSMUST00000200417 104 ntBASIC3.28□□□□□ -1.88
Lire1P11260 Gm43155-201ENSMUST00000202661 494 ntBASIC3.28□□□□□ -1.88
Lire1P11260 Gm35876-201ENSMUST00000205044 459 ntBASIC3.28□□□□□ -1.88
Lire1P11260 AC153971.2-201ENSMUST00000214553 777 ntBASIC3.28□□□□□ -1.88
Lire1P11260 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC3.28□□□□□ -1.88
Lire1P11260 Gm18729-201ENSMUST00000217230 621 ntBASIC3.28□□□□□ -1.88
Lire1P11260 AC153522.1-201ENSMUST00000220047 1090 ntBASIC3.28□□□□□ -1.88
Lire1P11260 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.28□□□□□ -1.88
Lire1P11260 Gm25205-201ENSMUST00000082841 103 ntBASIC3.28□□□□□ -1.88
Lire1P11260 Gm22739-201ENSMUST00000083437 160 ntBASIC3.28□□□□□ -1.88
Lire1P11260 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Lire1P11260 Gm45262-201ENSMUST00000209917 1463 ntBASIC3.28□□□□□ -1.88
Lire1P11260 Gm43379-201ENSMUST00000196253 7726 ntBASIC3.27□□□□□ -1.89
Lire1P11260 Gm38090-201ENSMUST00000195733 1942 ntBASIC3.27□□□□□ -1.89
Lire1P11260 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
Lire1P11260 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Lire1P11260 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Lire1P11260 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Lire1P11260 Gm22543-201ENSMUST00000104347 94 ntBASIC3.27□□□□□ -1.89
Lire1P11260 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
Lire1P11260 Gm14751-201ENSMUST00000117693 222 ntBASIC3.27□□□□□ -1.89
Lire1P11260 Gm12025-201ENSMUST00000117768 144 ntBASIC3.27□□□□□ -1.89
Lire1P11260 Gm13806-201ENSMUST00000117822 325 ntBASIC3.27□□□□□ -1.89
Lire1P11260 Gm15060-201ENSMUST00000119550 948 ntBASIC3.27□□□□□ -1.89
Lire1P11260 Gm26275-201ENSMUST00000157101 268 ntBASIC3.27□□□□□ -1.89
Lire1P11260 Gm25369-201ENSMUST00000158848 132 ntBASIC3.27□□□□□ -1.89
Lire1P11260 Gm24976-201ENSMUST00000158972 135 ntBASIC3.27□□□□□ -1.89
Lire1P11260 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC3.27□□□□□ -1.89
Lire1P11260 Gm24111-201ENSMUST00000175491 97 ntBASIC3.27□□□□□ -1.89
Lire1P11260 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC3.27□□□□□ -1.89
Lire1P11260 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC3.27□□□□□ -1.89
Lire1P11260 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC3.27□□□□□ -1.89
Lire1P11260 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC3.27□□□□□ -1.89
Lire1P11260 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 108.1 ms