Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Gm13339-201ENSMUST00000120651 510 ntBASIC3.59□□□□□ -1.83
Cbx4O55187 Gm14804-201ENSMUST00000122322 508 ntBASIC3.59□□□□□ -1.83
Cbx4O55187 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC3.59□□□□□ -1.83
Cbx4O55187 Gm26276-201ENSMUST00000157099 109 ntBASIC3.59□□□□□ -1.83
Cbx4O55187 Gm26045-201ENSMUST00000157862 97 ntBASIC3.59□□□□□ -1.83
Cbx4O55187 Gm24998-201ENSMUST00000157908 89 ntBASIC3.59□□□□□ -1.83
Cbx4O55187 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC3.59□□□□□ -1.83
Cbx4O55187 Gm20673-201ENSMUST00000177167 430 ntBASIC3.59□□□□□ -1.83
Cbx4O55187 Gm25156-201ENSMUST00000179809 79 ntBASIC3.59□□□□□ -1.83
Cbx4O55187 Gm27773-201ENSMUST00000184087 78 ntBASIC3.59□□□□□ -1.83
Cbx4O55187 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC3.59□□□□□ -1.83
Cbx4O55187 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Cbx4O55187 Gm36934-201ENSMUST00000192007 306 ntBASIC3.59□□□□□ -1.83
Cbx4O55187 Gm37565-201ENSMUST00000192277 491 ntTSL 3 BASIC3.59□□□□□ -1.83
Cbx4O55187 Gm9227-201ENSMUST00000194733 566 ntBASIC3.59□□□□□ -1.83
Cbx4O55187 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC3.59□□□□□ -1.83
Cbx4O55187 Gm44465-201ENSMUST00000199536 114 ntBASIC3.59□□□□□ -1.83
Cbx4O55187 Gm44720-201ENSMUST00000206076 260 ntBASIC3.59□□□□□ -1.83
Cbx4O55187 Gm19126-201ENSMUST00000207896 509 ntBASIC3.59□□□□□ -1.83
Cbx4O55187 Gm35857-201ENSMUST00000212739 178 ntBASIC3.59□□□□□ -1.83
Cbx4O55187 AC164117.2-201ENSMUST00000222090 327 ntBASIC3.59□□□□□ -1.83
Cbx4O55187 AC133176.1-201ENSMUST00000226668 219 ntBASIC3.59□□□□□ -1.83
Cbx4O55187 AC155237.2-201ENSMUST00000228487 478 ntBASIC3.59□□□□□ -1.83
Cbx4O55187 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.59□□□□□ -1.83
Cbx4O55187 1700008P02Rik-201ENSMUST00000091364 783 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Cbx4O55187 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.59□□□□□ -1.83
Cbx4O55187 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
Cbx4O55187 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
Cbx4O55187 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.59□□□□□ -1.84
Cbx4O55187 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
Cbx4O55187 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
Cbx4O55187 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
Cbx4O55187 Gm37970-201ENSMUST00000193865 1732 ntBASIC3.58□□□□□ -1.84
Cbx4O55187 Olfr679-202ENSMUST00000214328 5184 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Cbx4O55187 Gm37868-201ENSMUST00000195578 2735 ntBASIC3.58□□□□□ -1.84
Cbx4O55187 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Cbx4O55187 Gm10811-201ENSMUST00000221985 2448 ntBASIC3.58□□□□□ -1.84
Cbx4O55187 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Cbx4O55187 Gm13803-201ENSMUST00000117547 489 ntBASIC3.58□□□□□ -1.84
Cbx4O55187 Gm6373-201ENSMUST00000121026 360 ntBASIC3.58□□□□□ -1.84
Cbx4O55187 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Cbx4O55187 Gm24905-201ENSMUST00000158129 104 ntBASIC3.58□□□□□ -1.84
Cbx4O55187 Gm22501-201ENSMUST00000158981 127 ntBASIC3.58□□□□□ -1.84
Cbx4O55187 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC3.58□□□□□ -1.84
Cbx4O55187 Gm9071-201ENSMUST00000165915 474 ntBASIC3.58□□□□□ -1.84
Cbx4O55187 Ang-ps2-201ENSMUST00000178173 433 ntBASIC3.58□□□□□ -1.84
Cbx4O55187 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Cbx4O55187 Gm21758-201ENSMUST00000179336 819 ntBASIC3.58□□□□□ -1.84
Cbx4O55187 Gm22631-201ENSMUST00000179656 94 ntBASIC3.58□□□□□ -1.84
Cbx4O55187 Gm28594-201ENSMUST00000187022 661 ntBASIC3.58□□□□□ -1.84
Cbx4O55187 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC3.58□□□□□ -1.84
Cbx4O55187 Gm37343-201ENSMUST00000192542 111 ntBASIC3.58□□□□□ -1.84
Cbx4O55187 Gm37698-201ENSMUST00000192605 463 ntBASIC3.58□□□□□ -1.84
Cbx4O55187 Gm31511-201ENSMUST00000193134 657 ntBASIC3.58□□□□□ -1.84
Cbx4O55187 Gm36953-201ENSMUST00000195295 268 ntBASIC3.58□□□□□ -1.84
Cbx4O55187 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.58□□□□□ -1.84
Cbx4O55187 Gm43804-201ENSMUST00000198280 456 ntBASIC3.58□□□□□ -1.84
Cbx4O55187 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC3.58□□□□□ -1.84
Cbx4O55187 AC132384.9-201ENSMUST00000218085 277 ntBASIC3.58□□□□□ -1.84
Cbx4O55187 1700112M02Rik-201ENSMUST00000221719 348 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
Cbx4O55187 AC125379.1-201ENSMUST00000221928 111 ntBASIC3.58□□□□□ -1.84
Cbx4O55187 AC153662.1-201ENSMUST00000222220 270 ntBASIC3.58□□□□□ -1.84
Cbx4O55187 AC173481.1-201ENSMUST00000223351 270 ntBASIC3.58□□□□□ -1.84
Cbx4O55187 Gm24268-201ENSMUST00000082990 110 ntBASIC3.58□□□□□ -1.84
Cbx4O55187 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.58□□□□□ -1.84
Cbx4O55187 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Cbx4O55187 Olfr715-202ENSMUST00000214919 5114 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Cbx4O55187 Tex47-202ENSMUST00000159546 1402 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
Cbx4O55187 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC3.58□□□□□ -1.84
Cbx4O55187 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.58□□□□□ -1.84
Cbx4O55187 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
Cbx4O55187 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Cbx4O55187 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Cbx4O55187 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC3.58□□□□□ -1.84
Cbx4O55187 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Cbx4O55187 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Cbx4O55187 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Cbx4O55187 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC3.58□□□□□ -1.84
Cbx4O55187 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC3.58□□□□□ -1.84
Cbx4O55187 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Cbx4O55187 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Cbx4O55187 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.57□□□□□ -1.84
Cbx4O55187 Gm26075-201ENSMUST00000104062 121 ntBASIC3.57□□□□□ -1.84
Cbx4O55187 Mir669d-2-201ENSMUST00000116854 86 ntBASIC3.57□□□□□ -1.84
Cbx4O55187 Gm6797-201ENSMUST00000119440 512 ntBASIC3.57□□□□□ -1.84
Cbx4O55187 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC3.57□□□□□ -1.84
Cbx4O55187 Gm11430-201ENSMUST00000121317 217 ntBASIC3.57□□□□□ -1.84
Cbx4O55187 Gm22480-201ENSMUST00000122568 128 ntBASIC3.57□□□□□ -1.84
Cbx4O55187 Gm22080-201ENSMUST00000157591 106 ntBASIC3.57□□□□□ -1.84
Cbx4O55187 Gm23124-201ENSMUST00000157650 107 ntBASIC3.57□□□□□ -1.84
Cbx4O55187 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
Cbx4O55187 Gm22851-201ENSMUST00000178741 94 ntBASIC3.57□□□□□ -1.84
Cbx4O55187 Gm25074-201ENSMUST00000178782 94 ntBASIC3.57□□□□□ -1.84
Cbx4O55187 Gm4076-201ENSMUST00000179230 965 ntBASIC3.57□□□□□ -1.84
Cbx4O55187 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
Cbx4O55187 Gm23144-201ENSMUST00000180226 107 ntBASIC3.57□□□□□ -1.84
Cbx4O55187 Gm27660-201ENSMUST00000184028 208 ntBASIC3.57□□□□□ -1.84
Cbx4O55187 Gm27189-201ENSMUST00000184119 190 ntBASIC3.57□□□□□ -1.84
Cbx4O55187 Gm18356-201ENSMUST00000185677 623 ntBASIC3.57□□□□□ -1.84
Cbx4O55187 Gm28623-201ENSMUST00000187219 192 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 113.6 ms