Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gm12880-201ENSMUST00000120652 494 ntBASIC2.31□□□□□ -2.04
Sdc4O35988 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC2.31□□□□□ -2.04
Sdc4O35988 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
Sdc4O35988 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Sdc4O35988 Gm9696-202ENSMUST00000191541 830 ntBASIC2.31□□□□□ -2.04
Sdc4O35988 Gm38214-201ENSMUST00000192581 988 ntBASIC2.31□□□□□ -2.04
Sdc4O35988 Gm17893-201ENSMUST00000203017 770 ntBASIC2.31□□□□□ -2.04
Sdc4O35988 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.31□□□□□ -2.04
Sdc4O35988 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC2.31□□□□□ -2.04
Sdc4O35988 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Sdc4O35988 Gm4263-202ENSMUST00000221392 667 ntBASIC2.31□□□□□ -2.04
Sdc4O35988 AC165146.1-201ENSMUST00000223777 900 ntBASIC2.31□□□□□ -2.04
Sdc4O35988 AC165437.1-201ENSMUST00000228640 536 ntBASIC2.31□□□□□ -2.04
Sdc4O35988 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Sdc4O35988 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Sdc4O35988 Gm23447-201ENSMUST00000082798 163 ntBASIC2.31□□□□□ -2.04
Sdc4O35988 Snord104-201ENSMUST00000083192 70 ntBASIC2.31□□□□□ -2.04
Sdc4O35988 Gm23096-201ENSMUST00000083447 107 ntBASIC2.31□□□□□ -2.04
Sdc4O35988 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Sdc4O35988 Gm6185-201ENSMUST00000193379 3553 ntBASIC2.31□□□□□ -2.04
Sdc4O35988 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.3□□□□□ -2.04
Sdc4O35988 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Sdc4O35988 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.3□□□□□ -2.04
Sdc4O35988 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC2.3□□□□□ -2.04
Sdc4O35988 Gm14163-201ENSMUST00000117342 217 ntBASIC2.3□□□□□ -2.04
Sdc4O35988 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC2.3□□□□□ -2.04
Sdc4O35988 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC2.3□□□□□ -2.04
Sdc4O35988 Gm24900-201ENSMUST00000158128 134 ntBASIC2.3□□□□□ -2.04
Sdc4O35988 Vmn1r115-201ENSMUST00000169374 888 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Sdc4O35988 Gm18354-201ENSMUST00000173515 1068 ntBASIC2.3□□□□□ -2.04
Sdc4O35988 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Sdc4O35988 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Sdc4O35988 Mir7014-201ENSMUST00000183853 63 ntBASIC2.3□□□□□ -2.04
Sdc4O35988 Gm5731-201ENSMUST00000190969 481 ntBASIC2.3□□□□□ -2.04
Sdc4O35988 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC2.3□□□□□ -2.04
Sdc4O35988 Nras-ps2-201ENSMUST00000195269 178 ntBASIC2.3□□□□□ -2.04
Sdc4O35988 Gm8747-201ENSMUST00000195392 751 ntBASIC2.3□□□□□ -2.04
Sdc4O35988 Gm42565-201ENSMUST00000197839 572 ntTSL 5 BASIC2.3□□□□□ -2.04
Sdc4O35988 Gm44083-201ENSMUST00000203114 337 ntBASIC2.3□□□□□ -2.04
Sdc4O35988 Gm20039-201ENSMUST00000210329 394 ntBASIC2.3□□□□□ -2.04
Sdc4O35988 Gm7751-201ENSMUST00000212868 709 ntBASIC2.3□□□□□ -2.04
Sdc4O35988 AC159246.1-201ENSMUST00000214478 249 ntBASIC2.3□□□□□ -2.04
Sdc4O35988 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC2.3□□□□□ -2.04
Sdc4O35988 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC2.3□□□□□ -2.04
Sdc4O35988 AC117814.1-201ENSMUST00000226135 352 ntBASIC2.3□□□□□ -2.04
Sdc4O35988 Gm26226-201ENSMUST00000082509 116 ntBASIC2.3□□□□□ -2.04
Sdc4O35988 Gm22806-201ENSMUST00000082738 136 ntBASIC2.3□□□□□ -2.04
Sdc4O35988 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Sdc4O35988 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.3□□□□□ -2.04
Sdc4O35988 Gm4910-201ENSMUST00000119605 366 ntBASIC2.29□□□□□ -2.04
Sdc4O35988 Olfr1186-201ENSMUST00000121619 1090 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Sdc4O35988 Gm23642-201ENSMUST00000157858 258 ntBASIC2.29□□□□□ -2.04
Sdc4O35988 Vmn1r-ps67-201ENSMUST00000173843 691 ntBASIC2.29□□□□□ -2.04
Sdc4O35988 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC2.29□□□□□ -2.04
Sdc4O35988 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Sdc4O35988 Gm27921-201ENSMUST00000183968 108 ntBASIC2.29□□□□□ -2.04
Sdc4O35988 Gm6801-201ENSMUST00000190697 339 ntBASIC2.29□□□□□ -2.04
Sdc4O35988 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC2.29□□□□□ -2.04
Sdc4O35988 Gm37281-201ENSMUST00000192412 439 ntBASIC2.29□□□□□ -2.04
Sdc4O35988 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC2.29□□□□□ -2.04
Sdc4O35988 Gm7540-201ENSMUST00000219764 926 ntBASIC2.29□□□□□ -2.04
Sdc4O35988 Trdn-207ENSMUST00000219931 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
Sdc4O35988 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC2.29□□□□□ -2.04
Sdc4O35988 Gm9174-201ENSMUST00000078149 255 ntBASIC2.29□□□□□ -2.04
Sdc4O35988 Gm23249-201ENSMUST00000083369 161 ntBASIC2.29□□□□□ -2.04
Sdc4O35988 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC2.29□□□□□ -2.04
Sdc4O35988 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC2.29□□□□□ -2.04
Sdc4O35988 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
Sdc4O35988 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC2.28□□□□□ -2.04
Sdc4O35988 Gm25526-201ENSMUST00000104332 132 ntBASIC2.28□□□□□ -2.04
Sdc4O35988 Mir669d-201ENSMUST00000104644 121 ntBASIC2.28□□□□□ -2.04
Sdc4O35988 Gm15087-201ENSMUST00000117465 1172 ntBASIC2.28□□□□□ -2.04
Sdc4O35988 Gm12941-201ENSMUST00000117934 220 ntBASIC2.28□□□□□ -2.04
Sdc4O35988 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC2.28□□□□□ -2.04
Sdc4O35988 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.28□□□□□ -2.04
Sdc4O35988 Gm14907-201ENSMUST00000121948 854 ntBASIC2.28□□□□□ -2.04
Sdc4O35988 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC2.28□□□□□ -2.04
Sdc4O35988 Gm25392-201ENSMUST00000157335 297 ntBASIC2.28□□□□□ -2.04
Sdc4O35988 Gm22159-201ENSMUST00000158412 130 ntBASIC2.28□□□□□ -2.04
Sdc4O35988 Gm24769-201ENSMUST00000158506 129 ntBASIC2.28□□□□□ -2.04
Sdc4O35988 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
Sdc4O35988 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC2.28□□□□□ -2.04
Sdc4O35988 Gm38255-201ENSMUST00000194910 2996 ntBASIC2.28□□□□□ -2.04
Sdc4O35988 Mir7118-201ENSMUST00000197760 61 ntBASIC2.28□□□□□ -2.04
Sdc4O35988 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Sdc4O35988 Gm45048-201ENSMUST00000207058 429 ntBASIC2.28□□□□□ -2.04
Sdc4O35988 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.28□□□□□ -2.04
Sdc4O35988 Gm26064-201ENSMUST00000083381 109 ntBASIC2.28□□□□□ -2.04
Sdc4O35988 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC2.28□□□□□ -2.04
Sdc4O35988 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.28□□□□□ -2.04
Sdc4O35988 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.05
Sdc4O35988 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC2.27□□□□□ -2.05
Sdc4O35988 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Sdc4O35988 Gm38278-201ENSMUST00000194715 1365 ntBASIC2.27□□□□□ -2.05
Sdc4O35988 Gm8300-201ENSMUST00000110152 1873 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
Sdc4O35988 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Sdc4O35988 Gm24280-201ENSMUST00000104237 134 ntBASIC2.27□□□□□ -2.05
Sdc4O35988 Gm11488-201ENSMUST00000117277 863 ntBASIC2.27□□□□□ -2.05
Sdc4O35988 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC2.27□□□□□ -2.05
Sdc4O35988 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC2.27□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 119.5 ms