Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Gm28399-201ENSMUST00000186221 318 ntBASIC3.82□□□□□ -1.8
Capn1O35350 Gm19503-201ENSMUST00000187109 241 ntBASIC3.82□□□□□ -1.8
Capn1O35350 Gm28572-201ENSMUST00000187444 318 ntBASIC3.82□□□□□ -1.8
Capn1O35350 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC3.82□□□□□ -1.8
Capn1O35350 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC3.82□□□□□ -1.8
Capn1O35350 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC3.82□□□□□ -1.8
Capn1O35350 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC3.82□□□□□ -1.8
Capn1O35350 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC3.82□□□□□ -1.8
Capn1O35350 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Capn1O35350 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC3.82□□□□□ -1.8
Capn1O35350 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC3.82□□□□□ -1.8
Capn1O35350 Gm44946-201ENSMUST00000208425 572 ntBASIC3.82□□□□□ -1.8
Capn1O35350 Gm36243-201ENSMUST00000211546 610 ntTSL 3 BASIC3.82□□□□□ -1.8
Capn1O35350 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC3.82□□□□□ -1.8
Capn1O35350 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Capn1O35350 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC3.82□□□□□ -1.8
Capn1O35350 AC150560.2-201ENSMUST00000227208 171 ntBASIC3.82□□□□□ -1.8
Capn1O35350 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.82□□□□□ -1.8
Capn1O35350 Gm5548-201ENSMUST00000055878 397 ntBASIC3.82□□□□□ -1.8
Capn1O35350 Mir28a-201ENSMUST00000083560 86 ntBASIC3.82□□□□□ -1.8
Capn1O35350 Gm25411-201ENSMUST00000083760 151 ntBASIC3.82□□□□□ -1.8
Capn1O35350 Gm23850-201ENSMUST00000083830 169 ntBASIC3.82□□□□□ -1.8
Capn1O35350 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
Capn1O35350 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
Capn1O35350 Gm14429-201ENSMUST00000121881 2024 ntBASIC3.82□□□□□ -1.8
Capn1O35350 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
Capn1O35350 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Capn1O35350 Hfm1-202ENSMUST00000117588 4870 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Capn1O35350 Gm15084-201ENSMUST00000178585 1502 ntBASIC3.81□□□□□ -1.8
Capn1O35350 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
Capn1O35350 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.81□□□□□ -1.8
Capn1O35350 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Capn1O35350 Gm12427-201ENSMUST00000117719 302 ntBASIC3.81□□□□□ -1.8
Capn1O35350 Gm15180-201ENSMUST00000117745 492 ntBASIC3.81□□□□□ -1.8
Capn1O35350 Gm13873-201ENSMUST00000119208 427 ntBASIC3.81□□□□□ -1.8
Capn1O35350 Gm14570-201ENSMUST00000119444 391 ntBASIC3.81□□□□□ -1.8
Capn1O35350 Gm25104-201ENSMUST00000122476 163 ntBASIC3.81□□□□□ -1.8
Capn1O35350 Gm25177-201ENSMUST00000122634 117 ntBASIC3.81□□□□□ -1.8
Capn1O35350 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC3.81□□□□□ -1.8
Capn1O35350 Gm23234-201ENSMUST00000157304 134 ntBASIC3.81□□□□□ -1.8
Capn1O35350 Gm23053-201ENSMUST00000175136 96 ntBASIC3.81□□□□□ -1.8
Capn1O35350 Gm25999-201ENSMUST00000175398 133 ntBASIC3.81□□□□□ -1.8
Capn1O35350 Gm7858-201ENSMUST00000190177 622 ntBASIC3.81□□□□□ -1.8
Capn1O35350 Trbv8-201ENSMUST00000194020 285 ntBASIC3.81□□□□□ -1.8
Capn1O35350 Gm9379-201ENSMUST00000196790 646 ntBASIC3.81□□□□□ -1.8
Capn1O35350 Mir129b-201ENSMUST00000197461 65 ntBASIC3.81□□□□□ -1.8
Capn1O35350 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC3.81□□□□□ -1.8
Capn1O35350 Gm7039-201ENSMUST00000205138 346 ntBASIC3.81□□□□□ -1.8
Capn1O35350 Gm45860-201ENSMUST00000212700 334 ntBASIC3.81□□□□□ -1.8
Capn1O35350 Gm45772-201ENSMUST00000212961 240 ntBASIC3.81□□□□□ -1.8
Capn1O35350 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Capn1O35350 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.81□□□□□ -1.8
Capn1O35350 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Capn1O35350 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Capn1O35350 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Capn1O35350 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.81□□□□□ -1.8
Capn1O35350 Olfr1196-203ENSMUST00000216977 4225 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Capn1O35350 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Capn1O35350 Gm43829-201ENSMUST00000196191 3802 ntBASIC3.8□□□□□ -1.8
Capn1O35350 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Capn1O35350 Gm42447-201ENSMUST00000200102 2903 ntBASIC3.8□□□□□ -1.8
Capn1O35350 Gm14558-201ENSMUST00000117458 381 ntBASIC3.8□□□□□ -1.8
Capn1O35350 Gm12173-201ENSMUST00000117622 273 ntBASIC3.8□□□□□ -1.8
Capn1O35350 Gm13737-201ENSMUST00000119793 232 ntBASIC3.8□□□□□ -1.8
Capn1O35350 Gm9003-201ENSMUST00000121810 482 ntBASIC3.8□□□□□ -1.8
Capn1O35350 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC3.8□□□□□ -1.8
Capn1O35350 Gm24905-201ENSMUST00000158129 104 ntBASIC3.8□□□□□ -1.8
Capn1O35350 Gm25224-201ENSMUST00000158195 68 ntBASIC3.8□□□□□ -1.8
Capn1O35350 Gm24503-201ENSMUST00000158454 135 ntBASIC3.8□□□□□ -1.8
Capn1O35350 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC3.8□□□□□ -1.8
Capn1O35350 Mir5136-201ENSMUST00000175573 76 ntBASIC3.8□□□□□ -1.8
Capn1O35350 Gm22108-201ENSMUST00000177961 106 ntBASIC3.8□□□□□ -1.8
Capn1O35350 Gm24798-201ENSMUST00000179334 106 ntBASIC3.8□□□□□ -1.8
Capn1O35350 Gm7497-201ENSMUST00000183064 1003 ntBASIC3.8□□□□□ -1.8
Capn1O35350 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC3.8□□□□□ -1.8
Capn1O35350 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Capn1O35350 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC3.8□□□□□ -1.8
Capn1O35350 Gm43855-201ENSMUST00000197462 507 ntBASIC3.8□□□□□ -1.8
Capn1O35350 Gm43559-201ENSMUST00000198755 466 ntBASIC3.8□□□□□ -1.8
Capn1O35350 Gm44266-201ENSMUST00000205235 500 ntBASIC3.8□□□□□ -1.8
Capn1O35350 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC3.8□□□□□ -1.8
Capn1O35350 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Capn1O35350 CT030187.1-201ENSMUST00000220605 252 ntBASIC3.8□□□□□ -1.8
Capn1O35350 AC098719.1-201ENSMUST00000228920 371 ntBASIC3.8□□□□□ -1.8
Capn1O35350 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Capn1O35350 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Capn1O35350 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Capn1O35350 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC3.8□□□□□ -1.8
Capn1O35350 Gm14442-201ENSMUST00000119690 1736 ntBASIC3.8□□□□□ -1.8
Capn1O35350 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Capn1O35350 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Capn1O35350 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Capn1O35350 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
Capn1O35350 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC3.79□□□□□ -1.8
Capn1O35350 Gm21032-201ENSMUST00000208108 2578 ntBASIC3.79□□□□□ -1.8
Capn1O35350 AC167360.1-201ENSMUST00000222596 2494 ntBASIC3.79□□□□□ -1.8
Capn1O35350 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Capn1O35350 Csn1s2b-202ENSMUST00000101057 1668 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Capn1O35350 Gm15151-201ENSMUST00000117106 177 ntBASIC3.79□□□□□ -1.8
Capn1O35350 Gm5757-201ENSMUST00000117494 528 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 106.4 ms