Protein–RNA interactions for Protein: O35177

Nedd9, Enhancer of filamentation 1, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd9O35177 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Nedd9O35177 Gm38265-201ENSMUST00000193479 3766 ntBASIC4.31□□□□□ -1.72
Nedd9O35177 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
Nedd9O35177 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC4.3□□□□□ -1.72
Nedd9O35177 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
Nedd9O35177 Gm43260-201ENSMUST00000197378 2430 ntBASIC4.3□□□□□ -1.72
Nedd9O35177 Gm22472-201ENSMUST00000104115 134 ntBASIC4.3□□□□□ -1.72
Nedd9O35177 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Nedd9O35177 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC4.3□□□□□ -1.72
Nedd9O35177 Gm14681-201ENSMUST00000118047 411 ntBASIC4.3□□□□□ -1.72
Nedd9O35177 Gm15364-201ENSMUST00000119618 585 ntBASIC4.3□□□□□ -1.72
Nedd9O35177 Gm13711-201ENSMUST00000119708 453 ntBASIC4.3□□□□□ -1.72
Nedd9O35177 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Nedd9O35177 Gm23078-201ENSMUST00000157848 148 ntBASIC4.3□□□□□ -1.72
Nedd9O35177 Gm23781-201ENSMUST00000157940 308 ntBASIC4.3□□□□□ -1.72
Nedd9O35177 Gm24850-201ENSMUST00000158029 119 ntBASIC4.3□□□□□ -1.72
Nedd9O35177 Gm22769-201ENSMUST00000158367 98 ntBASIC4.3□□□□□ -1.72
Nedd9O35177 Gm26460-201ENSMUST00000175061 126 ntBASIC4.3□□□□□ -1.72
Nedd9O35177 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC4.3□□□□□ -1.72
Nedd9O35177 Mir6938-201ENSMUST00000184173 63 ntBASIC4.3□□□□□ -1.72
Nedd9O35177 Mir6345-201ENSMUST00000184286 128 ntBASIC4.3□□□□□ -1.72
Nedd9O35177 Gm19641-201ENSMUST00000188432 417 ntBASIC4.3□□□□□ -1.72
Nedd9O35177 Gm32447-201ENSMUST00000194265 697 ntBASIC4.3□□□□□ -1.72
Nedd9O35177 Gm33354-201ENSMUST00000195448 906 ntBASIC4.3□□□□□ -1.72
Nedd9O35177 Gm43723-201ENSMUST00000196886 189 ntBASIC4.3□□□□□ -1.72
Nedd9O35177 Gm43669-201ENSMUST00000198229 436 ntBASIC4.3□□□□□ -1.72
Nedd9O35177 Gm45375-201ENSMUST00000210338 280 ntBASIC4.3□□□□□ -1.72
Nedd9O35177 Fth-ps3-201ENSMUST00000210405 358 ntBASIC4.3□□□□□ -1.72
Nedd9O35177 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Nedd9O35177 Gm7751-201ENSMUST00000212868 709 ntBASIC4.3□□□□□ -1.72
Nedd9O35177 AC152946.2-201ENSMUST00000219071 337 ntBASIC4.3□□□□□ -1.72
Nedd9O35177 Gm8249-201ENSMUST00000219225 465 ntBASIC4.3□□□□□ -1.72
Nedd9O35177 Gm8785-201ENSMUST00000220259 487 ntBASIC4.3□□□□□ -1.72
Nedd9O35177 AC158523.1-201ENSMUST00000221398 328 ntBASIC4.3□□□□□ -1.72
Nedd9O35177 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Nedd9O35177 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Nedd9O35177 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Nedd9O35177 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC4.3□□□□□ -1.72
Nedd9O35177 Gm25592-201ENSMUST00000082635 131 ntBASIC4.3□□□□□ -1.72
Nedd9O35177 Mir132-201ENSMUST00000083603 66 ntBASIC4.3□□□□□ -1.72
Nedd9O35177 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Nedd9O35177 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Nedd9O35177 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC4.29□□□□□ -1.72
Nedd9O35177 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
Nedd9O35177 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Nedd9O35177 Gm3616-201ENSMUST00000174430 2514 ntBASIC4.29□□□□□ -1.72
Nedd9O35177 Gm3683-201ENSMUST00000175701 2513 ntBASIC4.29□□□□□ -1.72
Nedd9O35177 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Nedd9O35177 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Nedd9O35177 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Nedd9O35177 Gm26075-201ENSMUST00000104062 121 ntBASIC4.29□□□□□ -1.72
Nedd9O35177 Gm11221-201ENSMUST00000117230 597 ntBASIC4.29□□□□□ -1.72
Nedd9O35177 Gm13567-201ENSMUST00000118026 247 ntBASIC4.29□□□□□ -1.72
Nedd9O35177 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC4.29□□□□□ -1.72
Nedd9O35177 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC4.29□□□□□ -1.72
Nedd9O35177 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC4.29□□□□□ -1.72
Nedd9O35177 Gm25827-201ENSMUST00000157089 107 ntBASIC4.29□□□□□ -1.72
Nedd9O35177 Gm22501-201ENSMUST00000158981 127 ntBASIC4.29□□□□□ -1.72
Nedd9O35177 Gm3470-201ENSMUST00000160819 420 ntBASIC4.29□□□□□ -1.72
Nedd9O35177 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC4.29□□□□□ -1.72
Nedd9O35177 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC4.29□□□□□ -1.72
Nedd9O35177 Gm23003-201ENSMUST00000179948 107 ntBASIC4.29□□□□□ -1.72
Nedd9O35177 Gm8816-201ENSMUST00000182280 1163 ntBASIC4.29□□□□□ -1.72
Nedd9O35177 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC4.29□□□□□ -1.72
Nedd9O35177 Gm28579-201ENSMUST00000186143 369 ntBASIC4.29□□□□□ -1.72
Nedd9O35177 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC4.29□□□□□ -1.72
Nedd9O35177 Gm28506-201ENSMUST00000189937 150 ntBASIC4.29□□□□□ -1.72
Nedd9O35177 Cyp3a63-ps-201ENSMUST00000196626 1170 ntBASIC4.29□□□□□ -1.72
Nedd9O35177 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC4.29□□□□□ -1.72
Nedd9O35177 Gm8820-201ENSMUST00000204077 571 ntBASIC4.29□□□□□ -1.72
Nedd9O35177 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC4.29□□□□□ -1.72
Nedd9O35177 4930555G07Rik-202ENSMUST00000219879 750 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Nedd9O35177 AC140344.1-201ENSMUST00000223384 387 ntBASIC4.29□□□□□ -1.72
Nedd9O35177 AC154390.1-201ENSMUST00000225629 277 ntBASIC4.29□□□□□ -1.72
Nedd9O35177 CT009711.3-201ENSMUST00000225882 250 ntBASIC4.29□□□□□ -1.72
Nedd9O35177 AC123656.2-201ENSMUST00000226726 227 ntBASIC4.29□□□□□ -1.72
Nedd9O35177 AC122341.1-201ENSMUST00000227291 560 ntBASIC4.29□□□□□ -1.72
Nedd9O35177 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Nedd9O35177 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Nedd9O35177 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Nedd9O35177 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
Nedd9O35177 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Nedd9O35177 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
Nedd9O35177 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Nedd9O35177 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Nedd9O35177 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
Nedd9O35177 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Nedd9O35177 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Nedd9O35177 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Nedd9O35177 Gm21379-201ENSMUST00000179772 1955 ntBASIC4.28□□□□□ -1.72
Nedd9O35177 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Nedd9O35177 Gm23271-201ENSMUST00000104052 124 ntBASIC4.28□□□□□ -1.72
Nedd9O35177 Gm13664-201ENSMUST00000117304 345 ntBASIC4.28□□□□□ -1.72
Nedd9O35177 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC4.28□□□□□ -1.72
Nedd9O35177 Gm15112-201ENSMUST00000120152 860 ntBASIC4.28□□□□□ -1.72
Nedd9O35177 Gm15263-201ENSMUST00000121556 642 ntBASIC4.28□□□□□ -1.72
Nedd9O35177 Gm12087-201ENSMUST00000121878 258 ntBASIC4.28□□□□□ -1.72
Nedd9O35177 Gm22986-201ENSMUST00000122753 130 ntBASIC4.28□□□□□ -1.72
Nedd9O35177 Gm22314-201ENSMUST00000158007 281 ntBASIC4.28□□□□□ -1.72
Nedd9O35177 Gm22156-201ENSMUST00000158409 141 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 88.9 ms