Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm3489-201ENSMUST00000190083 528 ntBASIC3.52□□□□□ -1.85
Ccdc180J3QNE4 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.51□□□□□ -1.85
Ccdc180J3QNE4 Gm28974-201ENSMUST00000187893 231 ntBASIC3.51□□□□□ -1.85
Ccdc180J3QNE4 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC3.51□□□□□ -1.85
Ccdc180J3QNE4 AC161250.1-201ENSMUST00000213426 1111 ntBASIC3.51□□□□□ -1.85
Ccdc180J3QNE4 AC153532.1-201ENSMUST00000218126 1111 ntBASIC3.51□□□□□ -1.85
Ccdc180J3QNE4 n-R5s150-201ENSMUST00000122705 108 ntBASIC3.5□□□□□ -1.85
Ccdc180J3QNE4 Gm43582-201ENSMUST00000196149 343 ntBASIC3.5□□□□□ -1.85
Ccdc180J3QNE4 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC3.5□□□□□ -1.85
Ccdc180J3QNE4 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Ccdc180J3QNE4 Gm43896-201ENSMUST00000203440 2032 ntBASIC3.5□□□□□ -1.85
Ccdc180J3QNE4 Olfr1255-202ENSMUST00000214508 2253 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Ccdc180J3QNE4 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
Ccdc180J3QNE4 Gm24076-201ENSMUST00000158179 94 ntBASIC3.49□□□□□ -1.85
Ccdc180J3QNE4 Ear-ps4-201ENSMUST00000166834 450 ntBASIC3.49□□□□□ -1.85
Ccdc180J3QNE4 Gm27544-201ENSMUST00000185069 155 ntBASIC3.49□□□□□ -1.85
Ccdc180J3QNE4 Gm18861-201ENSMUST00000202509 1186 ntBASIC3.49□□□□□ -1.85
Ccdc180J3QNE4 AC153955.1-201ENSMUST00000217458 663 ntTSL 3 BASIC3.49□□□□□ -1.85
Ccdc180J3QNE4 AC154681.1-201ENSMUST00000225876 1735 ntBASIC3.49□□□□□ -1.85
Ccdc180J3QNE4 Gm23060-201ENSMUST00000102345 109 ntBASIC3.49□□□□□ -1.85
Ccdc180J3QNE4 Gm27468-201ENSMUST00000183577 106 ntBASIC3.49□□□□□ -1.85
Ccdc180J3QNE4 Gm39469-201ENSMUST00000214845 461 ntTSL 2 BASIC3.49□□□□□ -1.85
Ccdc180J3QNE4 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Ccdc180J3QNE4 Snord104-201ENSMUST00000083192 70 ntBASIC3.49□□□□□ -1.85
Ccdc180J3QNE4 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Ccdc180J3QNE4 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Ccdc180J3QNE4 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
Ccdc180J3QNE4 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
Ccdc180J3QNE4 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Ccdc180J3QNE4 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Ccdc180J3QNE4 Gm5900-201ENSMUST00000179862 375 ntBASIC3.48□□□□□ -1.85
Ccdc180J3QNE4 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC3.48□□□□□ -1.85
Ccdc180J3QNE4 Gm28155-201ENSMUST00000191066 151 ntBASIC3.48□□□□□ -1.85
Ccdc180J3QNE4 AC154828.2-201ENSMUST00000220908 1070 ntBASIC3.48□□□□□ -1.85
Ccdc180J3QNE4 AC090496.1-201ENSMUST00000226020 260 ntBASIC3.48□□□□□ -1.85
Ccdc180J3QNE4 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Ccdc180J3QNE4 Gm15421-202ENSMUST00000118224 399 ntBASIC3.47□□□□□ -1.85
Ccdc180J3QNE4 Gm18448-201ENSMUST00000186286 599 ntBASIC3.47□□□□□ -1.85
Ccdc180J3QNE4 AC116726.2-201ENSMUST00000217629 986 ntBASIC3.47□□□□□ -1.85
Ccdc180J3QNE4 AL928567.1-201ENSMUST00000197891 138 ntBASIC3.46□□□□□ -1.85
Ccdc180J3QNE4 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
Ccdc180J3QNE4 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
Ccdc180J3QNE4 Gm12697-201ENSMUST00000118008 667 ntBASIC3.46□□□□□ -1.86
Ccdc180J3QNE4 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Ccdc180J3QNE4 Olfr851-201ENSMUST00000064582 939 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Ccdc180J3QNE4 Gm22683-201ENSMUST00000082854 137 ntBASIC3.46□□□□□ -1.86
Ccdc180J3QNE4 Mir148b-201ENSMUST00000083626 97 ntBASIC3.46□□□□□ -1.86
Ccdc180J3QNE4 Gm12782-201ENSMUST00000117519 727 ntBASIC3.45□□□□□ -1.86
Ccdc180J3QNE4 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Ccdc180J3QNE4 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC3.45□□□□□ -1.86
Ccdc180J3QNE4 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Ccdc180J3QNE4 AC141642.1-201ENSMUST00000220598 229 ntBASIC3.45□□□□□ -1.86
Ccdc180J3QNE4 AC192088.2-201ENSMUST00000227590 411 ntBASIC3.45□□□□□ -1.86
Ccdc180J3QNE4 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC3.44□□□□□ -1.86
Ccdc180J3QNE4 Gm37331-201ENSMUST00000192367 3375 ntBASIC3.44□□□□□ -1.86
Ccdc180J3QNE4 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Ccdc180J3QNE4 Gm14404-201ENSMUST00000119117 1660 ntBASIC3.44□□□□□ -1.86
Ccdc180J3QNE4 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC3.44□□□□□ -1.86
Ccdc180J3QNE4 Gm14020-201ENSMUST00000118165 662 ntBASIC3.44□□□□□ -1.86
Ccdc180J3QNE4 Gm25945-201ENSMUST00000122484 135 ntBASIC3.44□□□□□ -1.86
Ccdc180J3QNE4 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC3.44□□□□□ -1.86
Ccdc180J3QNE4 Gm21742-201ENSMUST00000189352 548 ntBASIC3.44□□□□□ -1.86
Ccdc180J3QNE4 Gm37788-201ENSMUST00000193958 2705 ntBASIC3.44□□□□□ -1.86
Ccdc180J3QNE4 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Ccdc180J3QNE4 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC3.43□□□□□ -1.86
Ccdc180J3QNE4 Mup-ps4-201ENSMUST00000151005 539 ntBASIC3.43□□□□□ -1.86
Ccdc180J3QNE4 Gm23583-201ENSMUST00000158533 289 ntBASIC3.43□□□□□ -1.86
Ccdc180J3QNE4 Gm29658-201ENSMUST00000185404 230 ntBASIC3.43□□□□□ -1.86
Ccdc180J3QNE4 Mir7021-201ENSMUST00000197026 63 ntBASIC3.43□□□□□ -1.86
Ccdc180J3QNE4 AC133598.3-201ENSMUST00000224322 568 ntBASIC3.43□□□□□ -1.86
Ccdc180J3QNE4 AC141884.1-201ENSMUST00000226327 636 ntBASIC3.43□□□□□ -1.86
Ccdc180J3QNE4 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC3.43□□□□□ -1.86
Ccdc180J3QNE4 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
Ccdc180J3QNE4 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Ccdc180J3QNE4 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Ccdc180J3QNE4 Gm15844-201ENSMUST00000118016 576 ntBASIC3.42□□□□□ -1.86
Ccdc180J3QNE4 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC3.42□□□□□ -1.86
Ccdc180J3QNE4 AL645643.1-201ENSMUST00000222438 3897 ntBASIC3.42□□□□□ -1.86
Ccdc180J3QNE4 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Ccdc180J3QNE4 Gm773-201ENSMUST00000101561 951 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
Ccdc180J3QNE4 Gm25068-201ENSMUST00000103895 110 ntBASIC3.41□□□□□ -1.86
Ccdc180J3QNE4 Gm15087-201ENSMUST00000117465 1172 ntBASIC3.41□□□□□ -1.86
Ccdc180J3QNE4 Gm23714-201ENSMUST00000179259 105 ntBASIC3.41□□□□□ -1.86
Ccdc180J3QNE4 Gm18341-201ENSMUST00000197538 622 ntBASIC3.41□□□□□ -1.86
Ccdc180J3QNE4 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC3.41□□□□□ -1.86
Ccdc180J3QNE4 AC113031.4-201ENSMUST00000228381 514 ntBASIC3.41□□□□□ -1.86
Ccdc180J3QNE4 mt-Cytb-201ENSMUST00000082421 1144 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Ccdc180J3QNE4 Gm38265-201ENSMUST00000193479 3766 ntBASIC3.4□□□□□ -1.86
Ccdc180J3QNE4 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
Ccdc180J3QNE4 AL772271.1-201ENSMUST00000196848 65 ntBASIC3.4□□□□□ -1.86
Ccdc180J3QNE4 Gm9375-201ENSMUST00000208899 903 ntBASIC3.4□□□□□ -1.86
Ccdc180J3QNE4 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Ccdc180J3QNE4 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC3.39□□□□□ -1.87
Ccdc180J3QNE4 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC3.39□□□□□ -1.87
Ccdc180J3QNE4 Olfr1111-201ENSMUST00000099860 940 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Ccdc180J3QNE4 Gm44821-201ENSMUST00000208212 2002 ntBASIC3.39□□□□□ -1.87
Ccdc180J3QNE4 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
Ccdc180J3QNE4 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Ccdc180J3QNE4 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Ccdc180J3QNE4 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms