Protein–RNA interactions for Protein: A2APF3

Ctcfl, Transcriptional repressor CTCFL, mousemouse

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcflA2APF3 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
CtcflA2APF3 Mir7658-201ENSMUST00000184043 57 ntBASIC2.66□□□□□ -1.98
CtcflA2APF3 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC2.66□□□□□ -1.98
CtcflA2APF3 Gm8403-201ENSMUST00000189712 1298 ntBASIC2.66□□□□□ -1.98
CtcflA2APF3 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC2.66□□□□□ -1.98
CtcflA2APF3 Gm43070-201ENSMUST00000196938 415 ntBASIC2.66□□□□□ -1.98
CtcflA2APF3 Gm44555-201ENSMUST00000209008 148 ntBASIC2.66□□□□□ -1.98
CtcflA2APF3 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC2.66□□□□□ -1.98
CtcflA2APF3 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC2.66□□□□□ -1.98
CtcflA2APF3 Gm36485-201ENSMUST00000214286 464 ntTSL 3 BASIC2.66□□□□□ -1.98
CtcflA2APF3 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CtcflA2APF3 AC126275.1-201ENSMUST00000224881 446 ntBASIC2.66□□□□□ -1.98
CtcflA2APF3 AC124569.1-201ENSMUST00000225932 101 ntBASIC2.66□□□□□ -1.98
CtcflA2APF3 Lelp1-201ENSMUST00000029535 857 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CtcflA2APF3 Snora23-201ENSMUST00000082517 184 ntBASIC2.66□□□□□ -1.98
CtcflA2APF3 Gm22979-201ENSMUST00000082609 159 ntBASIC2.66□□□□□ -1.98
CtcflA2APF3 Gm22293-201ENSMUST00000083314 109 ntBASIC2.66□□□□□ -1.98
CtcflA2APF3 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
CtcflA2APF3 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
CtcflA2APF3 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
CtcflA2APF3 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
CtcflA2APF3 Gm44708-201ENSMUST00000205580 2237 ntBASIC2.65□□□□□ -1.98
CtcflA2APF3 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
CtcflA2APF3 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
CtcflA2APF3 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC2.65□□□□□ -1.99
CtcflA2APF3 Gm23887-201ENSMUST00000122683 172 ntBASIC2.65□□□□□ -1.99
CtcflA2APF3 Gm16274-201ENSMUST00000139251 592 ntBASIC2.65□□□□□ -1.99
CtcflA2APF3 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC2.65□□□□□ -1.99
CtcflA2APF3 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC2.65□□□□□ -1.99
CtcflA2APF3 Gm23028-201ENSMUST00000158773 265 ntBASIC2.65□□□□□ -1.99
CtcflA2APF3 Gm25748-201ENSMUST00000175487 70 ntBASIC2.65□□□□□ -1.99
CtcflA2APF3 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC2.65□□□□□ -1.99
CtcflA2APF3 Gm28917-201ENSMUST00000187294 237 ntBASIC2.65□□□□□ -1.99
CtcflA2APF3 Gm29013-201ENSMUST00000187431 237 ntBASIC2.65□□□□□ -1.99
CtcflA2APF3 Gm28766-201ENSMUST00000191086 234 ntBASIC2.65□□□□□ -1.99
CtcflA2APF3 Igkv15-97-201ENSMUST00000197637 339 ntBASIC2.65□□□□□ -1.99
CtcflA2APF3 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC2.65□□□□□ -1.99
CtcflA2APF3 C030015E24Rik-201ENSMUST00000198148 828 ntBASIC2.65□□□□□ -1.99
CtcflA2APF3 Amd-ps5-201ENSMUST00000198406 989 ntBASIC2.65□□□□□ -1.99
CtcflA2APF3 Gm44520-201ENSMUST00000205447 802 ntBASIC2.65□□□□□ -1.99
CtcflA2APF3 AC093926.1-201ENSMUST00000213730 243 ntBASIC2.65□□□□□ -1.99
CtcflA2APF3 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC2.65□□□□□ -1.99
CtcflA2APF3 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC2.65□□□□□ -1.99
CtcflA2APF3 AC173115.1-201ENSMUST00000220835 211 ntBASIC2.65□□□□□ -1.99
CtcflA2APF3 AC154248.2-201ENSMUST00000221964 659 ntTSL 5 BASIC2.65□□□□□ -1.99
CtcflA2APF3 AC154552.4-201ENSMUST00000222171 151 ntBASIC2.65□□□□□ -1.99
CtcflA2APF3 Gnrh1-202ENSMUST00000223929 428 ntBASIC2.65□□□□□ -1.99
CtcflA2APF3 AC147639.1-201ENSMUST00000224216 661 ntBASIC2.65□□□□□ -1.99
CtcflA2APF3 Vmn1r12-201ENSMUST00000073384 924 ntAPPRIS P2 BASIC2.65□□□□□ -1.99
CtcflA2APF3 Olfr1193-201ENSMUST00000081697 957 ntBASIC2.65□□□□□ -1.99
CtcflA2APF3 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
CtcflA2APF3 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CtcflA2APF3 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
CtcflA2APF3 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
CtcflA2APF3 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
CtcflA2APF3 Gm24403-201ENSMUST00000104616 130 ntBASIC2.64□□□□□ -1.99
CtcflA2APF3 Gm14736-201ENSMUST00000121470 336 ntBASIC2.64□□□□□ -1.99
CtcflA2APF3 Gm25107-201ENSMUST00000122472 129 ntBASIC2.64□□□□□ -1.99
CtcflA2APF3 Gm22960-201ENSMUST00000122517 104 ntBASIC2.64□□□□□ -1.99
CtcflA2APF3 Gm26020-201ENSMUST00000122729 183 ntBASIC2.64□□□□□ -1.99
CtcflA2APF3 Gm23168-201ENSMUST00000157156 143 ntBASIC2.64□□□□□ -1.99
CtcflA2APF3 Gm24532-201ENSMUST00000157951 286 ntBASIC2.64□□□□□ -1.99
CtcflA2APF3 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC2.64□□□□□ -1.99
CtcflA2APF3 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC2.64□□□□□ -1.99
CtcflA2APF3 Gm27342-201ENSMUST00000183530 109 ntBASIC2.64□□□□□ -1.99
CtcflA2APF3 Gm27330-201ENSMUST00000184689 132 ntBASIC2.64□□□□□ -1.99
CtcflA2APF3 Gm27700-201ENSMUST00000185003 81 ntBASIC2.64□□□□□ -1.99
CtcflA2APF3 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.64□□□□□ -1.99
CtcflA2APF3 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CtcflA2APF3 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
CtcflA2APF3 Gm20888-202ENSMUST00000186890 919 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CtcflA2APF3 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CtcflA2APF3 Gm20811-201ENSMUST00000190500 553 ntBASIC2.64□□□□□ -1.99
CtcflA2APF3 Gm28466-201ENSMUST00000190678 659 ntBASIC2.64□□□□□ -1.99
CtcflA2APF3 Gm37578-201ENSMUST00000192256 1177 ntBASIC2.64□□□□□ -1.99
CtcflA2APF3 Igkv9-128-201ENSMUST00000196602 353 ntBASIC2.64□□□□□ -1.99
CtcflA2APF3 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CtcflA2APF3 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CtcflA2APF3 Gm44399-201ENSMUST00000205043 226 ntBASIC2.64□□□□□ -1.99
CtcflA2APF3 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
CtcflA2APF3 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC2.64□□□□□ -1.99
CtcflA2APF3 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC2.64□□□□□ -1.99
CtcflA2APF3 AC153506.2-201ENSMUST00000218051 257 ntBASIC2.64□□□□□ -1.99
CtcflA2APF3 Gm19540-201ENSMUST00000221843 810 ntBASIC2.64□□□□□ -1.99
CtcflA2APF3 AC130823.2-201ENSMUST00000226169 290 ntBASIC2.64□□□□□ -1.99
CtcflA2APF3 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.64□□□□□ -1.99
CtcflA2APF3 Olfr1477-202ENSMUST00000217001 4000 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
CtcflA2APF3 Gm9496-201ENSMUST00000191295 1601 ntBASIC2.64□□□□□ -1.99
CtcflA2APF3 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.63□□□□□ -1.99
CtcflA2APF3 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.63□□□□□ -1.99
CtcflA2APF3 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
CtcflA2APF3 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CtcflA2APF3 Gm14913-201ENSMUST00000120011 1093 ntBASIC2.63□□□□□ -1.99
CtcflA2APF3 Gm14238-201ENSMUST00000120227 323 ntBASIC2.63□□□□□ -1.99
CtcflA2APF3 Gm15037-201ENSMUST00000120358 259 ntBASIC2.63□□□□□ -1.99
CtcflA2APF3 Gm12723-201ENSMUST00000120700 451 ntBASIC2.63□□□□□ -1.99
CtcflA2APF3 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC2.63□□□□□ -1.99
CtcflA2APF3 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC2.63□□□□□ -1.99
CtcflA2APF3 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CtcflA2APF3 Gm11998-201ENSMUST00000146304 972 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 94 ms