Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Trav11A0A0B4J1J9 Gm45941-201ENSMUST00000221907 675 ntTSL 3 BASIC2.08□□□□□ -2.08
Trav11A0A0B4J1J9 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.08□□□□□ -2.08
Trav11A0A0B4J1J9 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC2.08□□□□□ -2.08
Trav11A0A0B4J1J9 CT009713.6-201ENSMUST00000223615 294 ntBASIC2.08□□□□□ -2.08
Trav11A0A0B4J1J9 AC154788.1-201ENSMUST00000225003 340 ntBASIC2.08□□□□□ -2.08
Trav11A0A0B4J1J9 AC154262.1-201ENSMUST00000225976 286 ntBASIC2.08□□□□□ -2.08
Trav11A0A0B4J1J9 AC109172.1-201ENSMUST00000227503 187 ntBASIC2.08□□□□□ -2.08
Trav11A0A0B4J1J9 AC161758.2-201ENSMUST00000228513 218 ntBASIC2.08□□□□□ -2.08
Trav11A0A0B4J1J9 AC133189.2-201ENSMUST00000228527 392 ntBASIC2.08□□□□□ -2.08
Trav11A0A0B4J1J9 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC2.08□□□□□ -2.08
Trav11A0A0B4J1J9 Gm22740-201ENSMUST00000083439 109 ntBASIC2.08□□□□□ -2.08
Trav11A0A0B4J1J9 Mir137-201ENSMUST00000083635 73 ntBASIC2.08□□□□□ -2.08
Trav11A0A0B4J1J9 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
Trav11A0A0B4J1J9 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Trav11A0A0B4J1J9 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.08□□□□□ -2.08
Trav11A0A0B4J1J9 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 AC154511.1-201ENSMUST00000222578 1587 ntBASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 Gm43879-201ENSMUST00000203811 3760 ntBASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 Gm43881-201ENSMUST00000203051 2530 ntBASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 Snord14c-201ENSMUST00000101927 86 ntBASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 Gm14622-201ENSMUST00000117117 468 ntBASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 Gm14918-201ENSMUST00000118153 268 ntBASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 Gm14647-201ENSMUST00000119392 680 ntBASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 Gm14238-201ENSMUST00000120227 323 ntBASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 Gm15381-201ENSMUST00000121501 1156 ntBASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 Gm26254-201ENSMUST00000122491 118 ntBASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 Gm17061-201ENSMUST00000163167 499 ntBASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 Gm8338-201ENSMUST00000163928 363 ntBASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 Gm17119-201ENSMUST00000163943 280 ntBASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 Gm19898-201ENSMUST00000177490 251 ntBASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 Gm26928-201ENSMUST00000182674 572 ntBASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 Mir6386-201ENSMUST00000183558 104 ntBASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 Ighv3-7-201ENSMUST00000193370 348 ntBASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 Ighv1-41-201ENSMUST00000194414 329 ntBASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 Igkv9-128-201ENSMUST00000196602 353 ntBASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 Igkv13-74-1-201ENSMUST00000200611 242 ntBASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 Gm45245-201ENSMUST00000210082 376 ntBASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 Gm45400-201ENSMUST00000211603 653 ntBASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 Gm46193-201ENSMUST00000219399 364 ntBASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 Gm18116-201ENSMUST00000220920 537 ntBASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.07□□□□□ -2.08
Trav11A0A0B4J1J9 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Trav11A0A0B4J1J9 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Trav11A0A0B4J1J9 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Trav11A0A0B4J1J9 Gm24581-201ENSMUST00000103962 133 ntBASIC2.06□□□□□ -2.08
Trav11A0A0B4J1J9 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC2.06□□□□□ -2.08
Trav11A0A0B4J1J9 Igkv13-87-201ENSMUST00000114214 286 ntBASIC2.06□□□□□ -2.08
Trav11A0A0B4J1J9 Gm26473-201ENSMUST00000116763 127 ntBASIC2.06□□□□□ -2.08
Trav11A0A0B4J1J9 Gm14358-201ENSMUST00000118458 403 ntBASIC2.06□□□□□ -2.08
Trav11A0A0B4J1J9 Gm11430-201ENSMUST00000121317 217 ntBASIC2.06□□□□□ -2.08
Trav11A0A0B4J1J9 Mup-ps15-201ENSMUST00000121741 539 ntBASIC2.06□□□□□ -2.08
Trav11A0A0B4J1J9 Gm23791-201ENSMUST00000122553 293 ntBASIC2.06□□□□□ -2.08
Trav11A0A0B4J1J9 Gm12238-201ENSMUST00000127764 124 ntBASIC2.06□□□□□ -2.08
Trav11A0A0B4J1J9 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Trav11A0A0B4J1J9 2810403D21Rik-207ENSMUST00000152089 852 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Trav11A0A0B4J1J9 Gm23380-201ENSMUST00000158448 103 ntBASIC2.06□□□□□ -2.08
Trav11A0A0B4J1J9 Gm23387-201ENSMUST00000158586 107 ntBASIC2.06□□□□□ -2.08
Trav11A0A0B4J1J9 Gm22416-201ENSMUST00000158590 88 ntBASIC2.06□□□□□ -2.08
Trav11A0A0B4J1J9 Gm25119-201ENSMUST00000158815 88 ntBASIC2.06□□□□□ -2.08
Trav11A0A0B4J1J9 Gm16111-201ENSMUST00000162128 285 ntBASIC2.06□□□□□ -2.08
Trav11A0A0B4J1J9 Gm26061-201ENSMUST00000175584 108 ntBASIC2.06□□□□□ -2.08
Trav11A0A0B4J1J9 Gm21816-201ENSMUST00000179255 360 ntBASIC2.06□□□□□ -2.08
Trav11A0A0B4J1J9 Gm28628-201ENSMUST00000187006 264 ntBASIC2.06□□□□□ -2.08
Trav11A0A0B4J1J9 Gm29045-201ENSMUST00000187278 698 ntBASIC2.06□□□□□ -2.08
Trav11A0A0B4J1J9 Gm28629-201ENSMUST00000187309 263 ntBASIC2.06□□□□□ -2.08
Trav11A0A0B4J1J9 Gm20776-201ENSMUST00000189940 700 ntBASIC2.06□□□□□ -2.08
Trav11A0A0B4J1J9 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC2.06□□□□□ -2.08
Trav11A0A0B4J1J9 Amd-ps5-201ENSMUST00000198406 989 ntBASIC2.06□□□□□ -2.08
Trav11A0A0B4J1J9 Mir5121-201ENSMUST00000198528 74 ntBASIC2.06□□□□□ -2.08
Trav11A0A0B4J1J9 Gm45048-201ENSMUST00000207058 429 ntBASIC2.06□□□□□ -2.08
Trav11A0A0B4J1J9 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
Trav11A0A0B4J1J9 Gm44548-201ENSMUST00000208929 192 ntBASIC2.06□□□□□ -2.08
Trav11A0A0B4J1J9 Gm45912-201ENSMUST00000210646 543 ntBASIC2.06□□□□□ -2.08
Trav11A0A0B4J1J9 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.06□□□□□ -2.08
Trav11A0A0B4J1J9 AC173115.1-201ENSMUST00000220835 211 ntBASIC2.06□□□□□ -2.08
Trav11A0A0B4J1J9 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.06□□□□□ -2.08
Trav11A0A0B4J1J9 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Trav11A0A0B4J1J9 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 92.2 ms